BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= maV30378 (702 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BT023033-1|AAY55449.1| 186|Drosophila melanogaster IP04035p pro... 29 6.1 AY061331-1|AAL28879.1| 403|Drosophila melanogaster LD25702p pro... 29 6.1 AL021728-3|CAA16820.1| 1042|Drosophila melanogaster EG:95B7.8,FB... 29 6.1 AF141673-1|AAD32687.1| 1042|Drosophila melanogaster fs(1)YB prot... 29 6.1 AE014298-454|AAF45815.1| 1042|Drosophila melanogaster CG2706-PA ... 29 6.1 AE014296-1025|AAF50735.1| 525|Drosophila melanogaster CG10489-P... 29 6.1 AE013599-2059|AAF58136.1| 165|Drosophila melanogaster CG12959-P... 29 6.1 AB102715-1|BAD10843.1| 403|Drosophila melanogaster DNA polymera... 29 6.1 BT025842-1|ABF85742.1| 818|Drosophila melanogaster IP12350p pro... 29 8.1 BT024328-1|ABC86390.1| 593|Drosophila melanogaster IP10742p pro... 29 8.1 BT022956-1|AAY55372.1| 148|Drosophila melanogaster IP04235p pro... 29 8.1 AY089261-1|AAL89999.1| 518|Drosophila melanogaster AT04747p pro... 29 8.1 AY069653-1|AAL39798.1| 713|Drosophila melanogaster LD42374p pro... 29 8.1 AE014298-1938|AAF48300.2| 518|Drosophila melanogaster CG15760-P... 29 8.1 AE013599-1154|AAF58768.1| 713|Drosophila melanogaster CG11883-P... 29 8.1 AE013599-1153|AAF58767.1| 732|Drosophila melanogaster CG11883-P... 29 8.1 >BT023033-1|AAY55449.1| 186|Drosophila melanogaster IP04035p protein. Length = 186 Score = 29.1 bits (62), Expect = 6.1 Identities = 21/84 (25%), Positives = 34/84 (40%) Frame = +1 Query: 52 VSNRLHTSVCLHAQYKNACQNGALTGQVSPSSQNTNIIRHQSLWTFIRIRGTKSLQQ*VR 231 ++ L ++ LH ++ +NGA + P N + H +T+ +I Q +R Sbjct: 41 LTGTLTNALRLHLPHR---RNGASSTASEPLRPNLDGSHHLQEYTYKKITACDVCSQILR 97 Query: 232 VRRSHGLRPSICSLTMSAVCCSKL 303 GLR IC L C L Sbjct: 98 GHTRQGLRCRICKLNAHGDCAPNL 121 >AY061331-1|AAL28879.1| 403|Drosophila melanogaster LD25702p protein. Length = 403 Score = 29.1 bits (62), Expect = 6.1 Identities = 13/43 (30%), Positives = 21/43 (48%) Frame = +3 Query: 507 KVDLPSIFENISEVPERVDPQPPAAVLASSPFVTSQPTEELLR 635 ++DLP + E + ++ D PP A++ PF S LR Sbjct: 171 RLDLPVVMEKLRQLFVGYDSCPPQAIVLMGPFTASTRNHHELR 213 >AL021728-3|CAA16820.1| 1042|Drosophila melanogaster EG:95B7.8,FBgn0000928;fs(1)Yb protein. Length = 1042 Score = 29.1 bits (62), Expect = 6.1 Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 5/74 (6%) Frame = +3 Query: 471 KQENIFSNWLEEKVDLPSIFENISEVPERVDPQPPAAVLAS----SPFVTSQPTEELLRE 638 K++ I + + V L + FE S VD PAA + SPFVT PT+ L E Sbjct: 220 KEQEINLSVEDATVKLLASFELGSTDSAAVDESSPAAAKFNAPVYSPFVTENPTKSLDAE 279 Query: 639 FETVYGCCRV-NAF 677 F+ + +V N F Sbjct: 280 FQELVKSFKVQNVF 293 >AF141673-1|AAD32687.1| 1042|Drosophila melanogaster fs(1)YB protein. Length = 1042 Score = 29.1 bits (62), Expect = 6.1 Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 5/74 (6%) Frame = +3 Query: 471 KQENIFSNWLEEKVDLPSIFENISEVPERVDPQPPAAVLAS----SPFVTSQPTEELLRE 638 K++ I + + V L + FE S VD PAA + SPFVT PT+ L E Sbjct: 220 KEQEINLSVEDATVKLLASFELGSTDSAAVDESSPAAAKFNAPVYSPFVTENPTKSLDAE 279 Query: 639 FETVYGCCRV-NAF 677 F+ + +V N F Sbjct: 280 FQELVKSFKVQNVF 293 >AE014298-454|AAF45815.1| 1042|Drosophila melanogaster CG2706-PA protein. Length = 1042 Score = 29.1 bits (62), Expect = 6.1 Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 5/74 (6%) Frame = +3 Query: 471 KQENIFSNWLEEKVDLPSIFENISEVPERVDPQPPAAVLAS----SPFVTSQPTEELLRE 638 K++ I + + V L + FE S VD PAA + SPFVT PT+ L E Sbjct: 220 KEQEINLSVEDATVKLLASFELGSTDSAAVDESSPAAAKFNAPVYSPFVTENPTKSLDAE 279 Query: 639 FETVYGCCRV-NAF 677 F+ + +V N F Sbjct: 280 FQELVKSFKVQNVF 293 >AE014296-1025|AAF50735.1| 525|Drosophila melanogaster CG10489-PA protein. Length = 525 Score = 29.1 bits (62), Expect = 6.1 Identities = 13/43 (30%), Positives = 21/43 (48%) Frame = +3 Query: 507 KVDLPSIFENISEVPERVDPQPPAAVLASSPFVTSQPTEELLR 635 ++DLP + E + ++ D PP A++ PF S LR Sbjct: 293 RLDLPVVMEKLRQLFVGYDSCPPQAIVLMGPFTASTRNHHELR 335 >AE013599-2059|AAF58136.1| 165|Drosophila melanogaster CG12959-PA protein. Length = 165 Score = 29.1 bits (62), Expect = 6.1 Identities = 21/84 (25%), Positives = 34/84 (40%) Frame = +1 Query: 52 VSNRLHTSVCLHAQYKNACQNGALTGQVSPSSQNTNIIRHQSLWTFIRIRGTKSLQQ*VR 231 ++ L ++ LH ++ +NGA + P N + H +T+ +I Q +R Sbjct: 27 LTGTLTNALRLHLPHR---RNGASSTASEPLRPNLDGSHHLQEYTYKKITACDVCSQILR 83 Query: 232 VRRSHGLRPSICSLTMSAVCCSKL 303 GLR IC L C L Sbjct: 84 GHTRQGLRCRICKLNAHGDCAPNL 107 >AB102715-1|BAD10843.1| 403|Drosophila melanogaster DNA polymerase epsilon secondsubunit protein. Length = 403 Score = 29.1 bits (62), Expect = 6.1 Identities = 13/43 (30%), Positives = 21/43 (48%) Frame = +3 Query: 507 KVDLPSIFENISEVPERVDPQPPAAVLASSPFVTSQPTEELLR 635 ++DLP + E + ++ D PP A++ PF S LR Sbjct: 171 RLDLPVVMEKLRQLFVGYDSCPPQAIVLMGPFTASTRNHHELR 213 >BT025842-1|ABF85742.1| 818|Drosophila melanogaster IP12350p protein. Length = 818 Score = 28.7 bits (61), Expect = 8.1 Identities = 18/65 (27%), Positives = 25/65 (38%) Frame = +1 Query: 109 QNGALTGQVSPSSQNTNIIRHQSLWTFIRIRGTKSLQQ*VRVRRSHGLRPSICSLTMSAV 288 +NGA + P N + H +T+ +I Q +R GLR IC L Sbjct: 689 RNGASSTASEPLRPNLDGSHHLQEYTYKKITACDVCSQILRGHTRQGLRCRICKLNAHGD 748 Query: 289 CCSKL 303 C L Sbjct: 749 CAPNL 753 >BT024328-1|ABC86390.1| 593|Drosophila melanogaster IP10742p protein. Length = 593 Score = 28.7 bits (61), Expect = 8.1 Identities = 18/65 (27%), Positives = 25/65 (38%) Frame = +1 Query: 109 QNGALTGQVSPSSQNTNIIRHQSLWTFIRIRGTKSLQQ*VRVRRSHGLRPSICSLTMSAV 288 +NGA + P N + H +T+ +I Q +R GLR IC L Sbjct: 464 RNGASSTASEPLRPNLDGSHHLQEYTYKKITACDVCSQILRGHTRQGLRCRICKLNAHGD 523 Query: 289 CCSKL 303 C L Sbjct: 524 CAPNL 528 >BT022956-1|AAY55372.1| 148|Drosophila melanogaster IP04235p protein. Length = 148 Score = 28.7 bits (61), Expect = 8.1 Identities = 18/65 (27%), Positives = 25/65 (38%) Frame = +1 Query: 109 QNGALTGQVSPSSQNTNIIRHQSLWTFIRIRGTKSLQQ*VRVRRSHGLRPSICSLTMSAV 288 +NGA + P N + H +T+ +I Q +R GLR IC L Sbjct: 26 RNGASSTASEPLRPNLDGSHHLQEYTYKKITACDVCSQILRGHTRQGLRCRICKLNAHGD 85 Query: 289 CCSKL 303 C L Sbjct: 86 CAPNL 90 >AY089261-1|AAL89999.1| 518|Drosophila melanogaster AT04747p protein. Length = 518 Score = 28.7 bits (61), Expect = 8.1 Identities = 12/31 (38%), Positives = 16/31 (51%) Frame = +1 Query: 607 PRSPLKNCCGNSKRFMGAVELTHLTPPQSPP 699 P L+NCC S + G L ++ P SPP Sbjct: 266 PLHSLENCCQPSAQVSGVSSLANIGTPGSPP 296 >AY069653-1|AAL39798.1| 713|Drosophila melanogaster LD42374p protein. Length = 713 Score = 28.7 bits (61), Expect = 8.1 Identities = 17/41 (41%), Positives = 23/41 (56%) Frame = -3 Query: 607 VTKGLEARTAAGGCGSTRSGTSEMFSKIEGRSTFSSNQLEK 485 V++ R GCGS SG+ + + GRST S+QLEK Sbjct: 83 VSQPQSPRHRGSGCGSV-SGSRIITHGLTGRSTSISSQLEK 122 >AE014298-1938|AAF48300.2| 518|Drosophila melanogaster CG15760-PA protein. Length = 518 Score = 28.7 bits (61), Expect = 8.1 Identities = 12/31 (38%), Positives = 16/31 (51%) Frame = +1 Query: 607 PRSPLKNCCGNSKRFMGAVELTHLTPPQSPP 699 P L+NCC S + G L ++ P SPP Sbjct: 266 PLHSLENCCQPSAQVSGVSSLANIGTPGSPP 296 >AE013599-1154|AAF58768.1| 713|Drosophila melanogaster CG11883-PB, isoform B protein. Length = 713 Score = 28.7 bits (61), Expect = 8.1 Identities = 17/41 (41%), Positives = 23/41 (56%) Frame = -3 Query: 607 VTKGLEARTAAGGCGSTRSGTSEMFSKIEGRSTFSSNQLEK 485 V++ R GCGS SG+ + + GRST S+QLEK Sbjct: 83 VSQPQSPRHRGSGCGSV-SGSRIITHGLTGRSTSISSQLEK 122 >AE013599-1153|AAF58767.1| 732|Drosophila melanogaster CG11883-PA, isoform A protein. Length = 732 Score = 28.7 bits (61), Expect = 8.1 Identities = 17/41 (41%), Positives = 23/41 (56%) Frame = -3 Query: 607 VTKGLEARTAAGGCGSTRSGTSEMFSKIEGRSTFSSNQLEK 485 V++ R GCGS SG+ + + GRST S+QLEK Sbjct: 83 VSQPQSPRHRGSGCGSV-SGSRIITHGLTGRSTSISSQLEK 122 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 31,117,272 Number of Sequences: 53049 Number of extensions: 644736 Number of successful extensions: 1804 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 1701 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1804 length of database: 24,988,368 effective HSP length: 83 effective length of database: 20,585,301 effective search space used: 3087795150 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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