Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30377
         (759 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       26   0.38 
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    24   1.5  
AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochr...    23   2.6  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    22   4.6  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    22   4.6  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   6.1  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   8.1  

>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 25.8 bits (54), Expect = 0.38
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -2

Query: 662 PPLPQPSKPNALLLCGPTRHPITSKNIHQKA 570
           PP P  +  + LL   P R P+T + IH+KA
Sbjct: 351 PPNPLDAVTSGLL---PVRPPLTREEIHEKA 378


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +3

Query: 573 FLVDIFTGYRVSCGTAKQ*CIWF*RLGQWWYYKNGD 680
           FL+  F+G  VS  T K  C W    G W  Y+ G+
Sbjct: 9   FLLVYFSGALVSATTDKVVCYW----GTWSTYRWGN 40


>AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 125

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = -3

Query: 322 IILCHVIYNLACYPDLQ 272
           + +C  +  +AC+PD+Q
Sbjct: 3   VAICFALMCIACHPDIQ 19


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 12/42 (28%), Positives = 19/42 (45%)
 Frame = +1

Query: 103 ASSWREAIRFSCS*DKENPFSMVRMDRTPNRVGNCLLYHHSC 228
           ASS  E  +++   D  +   +++ DR      NCLL    C
Sbjct: 15  ASSLAENSKYTTKYDNVDLDEIIKSDRLLKNYVNCLLEKGKC 56


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 675 GDLELISQLISFLLVVARLVS 737
           G L+    LISF L++ RL+S
Sbjct: 190 GTLKTAYYLISFALLIMRLIS 210


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +2

Query: 167 WSEWTALPIG*GTAYYITIRVSFGNEKIVATVK 265
           WSE+T    G      + IR ++GN KI    K
Sbjct: 234 WSEFTQKTQGQIYGIKVDIRDAYGNVKIPVLCK 266


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory
          receptor candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -3

Query: 40 ITHSHFLCLF 11
          +T +HF+CLF
Sbjct: 27 VTFAHFICLF 36


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,400
Number of Sequences: 336
Number of extensions: 4451
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)