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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30374
         (769 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBP23A10.15c |qcr1|mas1|mitochondrial processing peptidase comp...   243   2e-65
SPBC18E5.12c |mas2|SPBC23G7.02c|mitochondrial processing peptida...   102   5e-23
SPCC613.10 |qcr2||ubiquinol-cytochrome-c reductase complex core ...    58   1e-09
SPAC3H1.02c |||metallopeptidase|Schizosaccharomyces pombe|chr 1|...    44   2e-05
SPACUNK4.12c |mug138||metallopeptidase|Schizosaccharomyces pombe...    43   4e-05
SPBC119.17 ||SPBC577.01|metallopeptidase|Schizosaccharomyces pom...    36   0.006
SPCC74.06 |mak3|phk2|histidine kinase Mak3 |Schizosaccharomyces ...    29   0.73 
SPAC22F8.07c |rtf1||replication termination factor Rtf1|Schizosa...    29   0.97 
SPCC584.01c |||sulfite reductase NADPH flavoprotein subunit |Sch...    28   1.7  
SPCC1739.01 ||SPCC1906.05|zf-CCCH type zinc finger protein|Schiz...    27   2.2  
SPBPB2B2.13 |||galactokinase Gal1 |Schizosaccharomyces pombe|chr...    27   3.9  
SPBC83.11 |||triose phosphate transporter|Schizosaccharomyces po...    26   6.8  
SPBC19C2.05 |ran1|pat1|serine/threonine protein kinase Ran1|Schi...    26   6.8  
SPAC11D3.14c |||oxoprolinase |Schizosaccharomyces pombe|chr 1|||...    25   9.0  
SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces pom...    25   9.0  

>SPBP23A10.15c |qcr1|mas1|mitochondrial processing peptidase complex
           beta subunit Qcr1|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 457

 Score =  243 bits (595), Expect = 2e-65
 Identities = 118/201 (58%), Positives = 149/201 (74%), Gaps = 1/201 (0%)
 Frame = +3

Query: 168 ALVNVPPTKLTVLDNGLRIATEDSG-AATATVGLWIDAGSRYETSKNNGVAHFLEHMAFK 344
           A   +P T+ T L NGL +ATE    A TATV + +DAGSR ET+KNNG AHFLEH+AFK
Sbjct: 15  ATTALPKTETTTLKNGLTVATEHHPYAQTATVLVGVDAGSRAETAKNNGAAHFLEHLAFK 74

Query: 345 GTSKRSQTDLELLVENMGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEP 524
           GT  RSQ  LEL  EN GAHLNAYTSREQTV+YA    N VP AV +LADI+ NSS++  
Sbjct: 75  GTKNRSQKALELEFENTGAHLNAYTSREQTVYYAHAFKNAVPNAVAVLADILTNSSISAS 134

Query: 525 EIERERGVILREMQDVESNLQEVVFDHLHATAFQGTPLGQTILGPTKNIKKISKADLQSY 704
            +ERER VILRE ++V+    EVVFDHLHATA+QG PLG+TILGP +NI+ +++ DL  Y
Sbjct: 135 AVERERQVILREQEEVDKMADEVVFDHLHATAYQGHPLGRTILGPKENIESLTREDLLQY 194

Query: 705 IRNHYQPGRIVLSGAGGVKHE 767
           I+++Y+  R+++S AG + HE
Sbjct: 195 IKDNYRSDRMIISSAGSISHE 215


>SPBC18E5.12c |mas2|SPBC23G7.02c|mitochondrial processing peptidase
           complex alpha subunit Mas2|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 494

 Score =  102 bits (245), Expect = 5e-23
 Identities = 50/183 (27%), Positives = 97/183 (53%)
 Frame = +3

Query: 204 LDNGLRIATEDSGAATATVGLWIDAGSRYETSKNNGVAHFLEHMAFKGTSKRSQTDLELL 383
           L NG+    +      + +G+++ AGSRYET K +GV+HF++ +AF+ T +    +++  
Sbjct: 51  LKNGVTYVCDPRPGHFSGLGVYVKAGSRYETKKFSGVSHFMDRLAFQATERTPVGEMKAK 110

Query: 384 VENMGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIERERGVILREM 563
           +EN+G +    TSRE  ++ A    +DV    ++LA+ +    + E ++   R  I+ E 
Sbjct: 111 LENLGGNYMCSTSRESMIYQAAVFNDDVKSMSKLLAETVLAPKIQEDDLVHYRDSIIYEN 170

Query: 564 QDVESNLQEVVFDHLHATAFQGTPLGQTILGPTKNIKKISKADLQSYIRNHYQPGRIVLS 743
            ++ +    ++ +  H TAFQ   LG  +L     +  I+   ++ Y++  Y+P  + L+
Sbjct: 171 SELWTKPDALLGEFAHVTAFQNNTLGNCLLCTPDKVNGITATSIREYLKYFYRPEHLTLA 230

Query: 744 GAG 752
            AG
Sbjct: 231 YAG 233


>SPCC613.10 |qcr2||ubiquinol-cytochrome-c reductase complex core
           protein Qcr2|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 426

 Score = 58.4 bits (135), Expect = 1e-09
 Identities = 43/173 (24%), Positives = 82/173 (47%), Gaps = 4/173 (2%)
 Frame = +3

Query: 213 GLRIATEDSGAATATVGLWIDAGSRYETSKNNGVAHFLEHMAFKGTSKRSQTDLELLVEN 392
           G+  A  ++  AT ++ + I+AGSRY+     GV+H LE  AFK T +RS   +    E 
Sbjct: 30  GVSFAGRETPTATGSLSVVINAGSRYQPDA--GVSHLLEKFAFKTTEERSALRITRESEL 87

Query: 393 MGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIERERGVILR-EMQD 569
           +G  L+   +RE  +  A+ L   +     +LA+++  +     ++  E     R E + 
Sbjct: 88  LGGQLSTQITREHIILTARFLNEYLEYYARLLAEVVDATKFLPFQLTEEVLPTARIESEL 147

Query: 570 VESNLQEVVFDHLHATAFQGTPLGQTILGP---TKNIKKISKADLQSYIRNHY 719
              ++  V    LH  AF    +G  +  P   + +I +I     ++Y+++++
Sbjct: 148 FREDILRVAMAKLHEKAFH-RGIGNEVYLPASASPSISEIKDFASKAYVKSNF 199


>SPAC3H1.02c |||metallopeptidase|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 1036

 Score = 44.0 bits (99), Expect = 2e-05
 Identities = 42/167 (25%), Positives = 67/167 (40%), Gaps = 13/167 (7%)
 Frame = +3

Query: 291 ETSKNNGVAHFLEHMAFKGTSKRSQTD-LELLVENMGAHLNAYTSREQTVFYAKCLAND- 464
           E   N G  H LEH+ F G+ K      L          +NA T  + T +       D 
Sbjct: 52  EAHDNLGCPHTLEHLCFMGSKKYPMNGILTKFAGRACGDINACTDVDYTSYELSAAEEDG 111

Query: 465 ----VPV-AVEILADIIQNSSLAEPEIE-----RERGVILREMQDVESNLQEVVFDHLHA 614
               +PV A  IL+ I+ + +             E GV+  EMQ+ +S+  +V+FD +  
Sbjct: 112 FLRLLPVFADHILSPILSDEAFCTEVYHINGMGEESGVVYSEMQNTQSSETDVMFDCMRT 171

Query: 615 TAFQGTP-LGQTILGPTKNIKKISKADLQSYIRNHYQPGRIVLSGAG 752
           + +  T        G    ++K+S   ++ Y +  Y P  I L   G
Sbjct: 172 SQYPVTSGYYYETGGHPSELRKLSIEKIREYHKEMYVPSNICLIVTG 218


>SPACUNK4.12c |mug138||metallopeptidase|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 969

 Score = 43.2 bits (97), Expect = 4e-05
 Identities = 33/133 (24%), Positives = 61/133 (45%), Gaps = 3/133 (2%)
 Frame = +3

Query: 192 KLTVLDNGLRIA-TEDSGAATATVGLWIDAGSRYETSKNNGVAHFLEHMAFKGTSK-RSQ 365
           +L  L+N L +    D     A+  + +  GS+    +  G+AHF EH+ F GT K   +
Sbjct: 25  RLIKLENDLEVLLVRDPETDNASAAIDVHIGSQSNPRELLGLAHFCEHLLFMGTKKYPDE 84

Query: 366 TDLELLVENMGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIERE-R 542
            +    +E+     NAYT+   T +Y +   + +  A++  A    +    E   +RE R
Sbjct: 85  NEYRKYLESHNGISNAYTASNNTNYYFEVSHDALYGALDRFAQFFIDPLFLEECKDREIR 144

Query: 543 GVILREMQDVESN 581
            V     ++++S+
Sbjct: 145 AVDSEHCKNLQSD 157


>SPBC119.17 ||SPBC577.01|metallopeptidase|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 992

 Score = 35.9 bits (79), Expect = 0.006
 Identities = 37/179 (20%), Positives = 67/179 (37%), Gaps = 21/179 (11%)
 Frame = +3

Query: 279 GSRYETSKNNGVAHFLEHMAFKGTSKRSQTD--LELLVENMGAHLNAYTSREQTVF-YAK 449
           G +     + G+ H LEH    G++K    D   ++L  ++   +NA+T+ + T + +A 
Sbjct: 78  GFQTPAENDEGIPHILEHTTLCGSNKYPVRDPFFKMLNRSLATFMNAFTASDFTFYPFAT 137

Query: 450 CLANDVPVAVEILADIIQNSSLAEPEIERE------------------RGVILREMQDVE 575
               D     ++  D      L + +  +E                   GV+  EM+   
Sbjct: 138 VNTTDYKNLRDVYLDATLFPKLRKLDFLQEGWRFEHADVNDKKSPIIFNGVVYNEMKGQV 197

Query: 576 SNLQEVVFDHLHATAFQGTPLGQTILGPTKNIKKISKADLQSYIRNHYQPGRIVLSGAG 752
           S+   + +       FQGT  G    G    I  +   +L  + R+HY P    +   G
Sbjct: 198 SDSSYIFYMLFQQHLFQGTAYGFNSGGDPLAIPDLKYEELVKFHRSHYHPSNAKILSYG 256


>SPCC74.06 |mak3|phk2|histidine kinase Mak3 |Schizosaccharomyces
            pombe|chr 3|||Manual
          Length = 2344

 Score = 29.1 bits (62), Expect = 0.73
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = -3

Query: 662  GRSKNCLSQWGTLECCCVKVIKHNLLKVTFDILHFAKNDTAFSF 531
            GRS  C  +WG L+  C    + N LKVT  +  F  N+   +F
Sbjct: 2146 GRSFACKKRWGFLQMPCT---RENFLKVTLQV--FKSNEDTCNF 2184


>SPAC22F8.07c |rtf1||replication termination factor
           Rtf1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 466

 Score = 28.7 bits (61), Expect = 0.97
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -2

Query: 372 SPSVIFYWYL*KPCVQGNERHHCSWRFHS 286
           +PS    W L    ++   RHHC W++++
Sbjct: 329 NPSSPIQWSLISKNMRNRHRHHCRWKYYT 357


>SPCC584.01c |||sulfite reductase NADPH flavoprotein subunit
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1006

 Score = 27.9 bits (59), Expect = 1.7
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -3

Query: 551 NDTAFSFDFGFGEGGILYDISKDLYCYG 468
           N   F  +F  G+ G+ YDI + L  YG
Sbjct: 641 NRNIFHIEFDLGDSGLTYDIGEALGVYG 668


>SPCC1739.01 ||SPCC1906.05|zf-CCCH type zinc finger
           protein|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 547

 Score = 27.5 bits (58), Expect = 2.2
 Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
 Frame = +3

Query: 315 AHFLEHMAFKGTSKRSQTDLELLVENMGAHLNAYTSREQTVFYAKCLANDVPVAV-EILA 491
           A+F +    +G+   S T L   V N     + ++ RE+ VF +       PV++  + +
Sbjct: 430 AYFSKSRYVEGSGSMSTTPLATSVNNSYKLPSGFSVREEAVFSSPTTEGSRPVSLARLKS 489

Query: 492 DIIQNSSLAEPE 527
           + I  S  A PE
Sbjct: 490 EPIFRSDTASPE 501


>SPBPB2B2.13 |||galactokinase Gal1 |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 519

 Score = 26.6 bits (56), Expect = 3.9
 Identities = 11/30 (36%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
 Frame = +1

Query: 607 FTQQHSKVPHWDKQFLDL-PKILRKSLRLT 693
           + ++H K PHWD   +D+  + +++ LRLT
Sbjct: 306 YYEKHLKQPHWDGSDIDMGVQRMQEMLRLT 335


>SPBC83.11 |||triose phosphate transporter|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 434

 Score = 25.8 bits (54), Expect = 6.8
 Identities = 23/107 (21%), Positives = 43/107 (40%)
 Frame = +3

Query: 228 TEDSGAATATVGLWIDAGSRYETSKNNGVAHFLEHMAFKGTSKRSQTDLELLVENMGAHL 407
           T+ SG     +GLW+     Y+ SK   +    +   F+  +      LEL  + M    
Sbjct: 280 TQGSGIFLTAIGLWL-----YDRSKKGNLYESCKVKEFEKDA------LELEEQTMEDEK 328

Query: 408 NAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIERERGV 548
           +  +S  Q+ FY K     +   ++ +  +I +S +    +    GV
Sbjct: 329 SYPSSGTQSPFYGKNFLPQITPRLDSVVPLISDSPMTPNSVYSNEGV 375


>SPBC19C2.05 |ran1|pat1|serine/threonine protein kinase
           Ran1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 470

 Score = 25.8 bits (54), Expect = 6.8
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +1

Query: 394 WVHT*TPTPPGNKQFFTQNASLMTFP 471
           W H  TPT P + Q  T N+SL   P
Sbjct: 361 WNHCATPTIPVSLQVLTPNSSLKVDP 386


>SPAC11D3.14c |||oxoprolinase |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 1260

 Score = 25.4 bits (53), Expect = 9.0
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = -3

Query: 329 FKEMSDTIVLGGFIAGASVDPESYSGSGGSRIFSSN 222
           F+ + +  + G +I    +D ++ +  GGSR+F  N
Sbjct: 328 FEHIYEANIFGLYIQSPQLDIQTVAAGGGSRLFWRN 363


>SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 963

 Score = 25.4 bits (53), Expect = 9.0
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -1

Query: 280 PASIQSPTVAVAAPESSVAIRKPLSSTVS 194
           P+S++ P      P S ++ + P S+TVS
Sbjct: 189 PSSLEKPAGTGDLPSSEISTKAPASTTVS 217


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,334,303
Number of Sequences: 5004
Number of extensions: 72846
Number of successful extensions: 201
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 199
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 369323696
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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