BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= maV30374 (769 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBP23A10.15c |qcr1|mas1|mitochondrial processing peptidase comp... 243 2e-65 SPBC18E5.12c |mas2|SPBC23G7.02c|mitochondrial processing peptida... 102 5e-23 SPCC613.10 |qcr2||ubiquinol-cytochrome-c reductase complex core ... 58 1e-09 SPAC3H1.02c |||metallopeptidase|Schizosaccharomyces pombe|chr 1|... 44 2e-05 SPACUNK4.12c |mug138||metallopeptidase|Schizosaccharomyces pombe... 43 4e-05 SPBC119.17 ||SPBC577.01|metallopeptidase|Schizosaccharomyces pom... 36 0.006 SPCC74.06 |mak3|phk2|histidine kinase Mak3 |Schizosaccharomyces ... 29 0.73 SPAC22F8.07c |rtf1||replication termination factor Rtf1|Schizosa... 29 0.97 SPCC584.01c |||sulfite reductase NADPH flavoprotein subunit |Sch... 28 1.7 SPCC1739.01 ||SPCC1906.05|zf-CCCH type zinc finger protein|Schiz... 27 2.2 SPBPB2B2.13 |||galactokinase Gal1 |Schizosaccharomyces pombe|chr... 27 3.9 SPBC83.11 |||triose phosphate transporter|Schizosaccharomyces po... 26 6.8 SPBC19C2.05 |ran1|pat1|serine/threonine protein kinase Ran1|Schi... 26 6.8 SPAC11D3.14c |||oxoprolinase |Schizosaccharomyces pombe|chr 1|||... 25 9.0 SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces pom... 25 9.0 >SPBP23A10.15c |qcr1|mas1|mitochondrial processing peptidase complex beta subunit Qcr1|Schizosaccharomyces pombe|chr 2|||Manual Length = 457 Score = 243 bits (595), Expect = 2e-65 Identities = 118/201 (58%), Positives = 149/201 (74%), Gaps = 1/201 (0%) Frame = +3 Query: 168 ALVNVPPTKLTVLDNGLRIATEDSG-AATATVGLWIDAGSRYETSKNNGVAHFLEHMAFK 344 A +P T+ T L NGL +ATE A TATV + +DAGSR ET+KNNG AHFLEH+AFK Sbjct: 15 ATTALPKTETTTLKNGLTVATEHHPYAQTATVLVGVDAGSRAETAKNNGAAHFLEHLAFK 74 Query: 345 GTSKRSQTDLELLVENMGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEP 524 GT RSQ LEL EN GAHLNAYTSREQTV+YA N VP AV +LADI+ NSS++ Sbjct: 75 GTKNRSQKALELEFENTGAHLNAYTSREQTVYYAHAFKNAVPNAVAVLADILTNSSISAS 134 Query: 525 EIERERGVILREMQDVESNLQEVVFDHLHATAFQGTPLGQTILGPTKNIKKISKADLQSY 704 +ERER VILRE ++V+ EVVFDHLHATA+QG PLG+TILGP +NI+ +++ DL Y Sbjct: 135 AVERERQVILREQEEVDKMADEVVFDHLHATAYQGHPLGRTILGPKENIESLTREDLLQY 194 Query: 705 IRNHYQPGRIVLSGAGGVKHE 767 I+++Y+ R+++S AG + HE Sbjct: 195 IKDNYRSDRMIISSAGSISHE 215 >SPBC18E5.12c |mas2|SPBC23G7.02c|mitochondrial processing peptidase complex alpha subunit Mas2|Schizosaccharomyces pombe|chr 2|||Manual Length = 494 Score = 102 bits (245), Expect = 5e-23 Identities = 50/183 (27%), Positives = 97/183 (53%) Frame = +3 Query: 204 LDNGLRIATEDSGAATATVGLWIDAGSRYETSKNNGVAHFLEHMAFKGTSKRSQTDLELL 383 L NG+ + + +G+++ AGSRYET K +GV+HF++ +AF+ T + +++ Sbjct: 51 LKNGVTYVCDPRPGHFSGLGVYVKAGSRYETKKFSGVSHFMDRLAFQATERTPVGEMKAK 110 Query: 384 VENMGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIERERGVILREM 563 +EN+G + TSRE ++ A +DV ++LA+ + + E ++ R I+ E Sbjct: 111 LENLGGNYMCSTSRESMIYQAAVFNDDVKSMSKLLAETVLAPKIQEDDLVHYRDSIIYEN 170 Query: 564 QDVESNLQEVVFDHLHATAFQGTPLGQTILGPTKNIKKISKADLQSYIRNHYQPGRIVLS 743 ++ + ++ + H TAFQ LG +L + I+ ++ Y++ Y+P + L+ Sbjct: 171 SELWTKPDALLGEFAHVTAFQNNTLGNCLLCTPDKVNGITATSIREYLKYFYRPEHLTLA 230 Query: 744 GAG 752 AG Sbjct: 231 YAG 233 >SPCC613.10 |qcr2||ubiquinol-cytochrome-c reductase complex core protein Qcr2|Schizosaccharomyces pombe|chr 3|||Manual Length = 426 Score = 58.4 bits (135), Expect = 1e-09 Identities = 43/173 (24%), Positives = 82/173 (47%), Gaps = 4/173 (2%) Frame = +3 Query: 213 GLRIATEDSGAATATVGLWIDAGSRYETSKNNGVAHFLEHMAFKGTSKRSQTDLELLVEN 392 G+ A ++ AT ++ + I+AGSRY+ GV+H LE AFK T +RS + E Sbjct: 30 GVSFAGRETPTATGSLSVVINAGSRYQPDA--GVSHLLEKFAFKTTEERSALRITRESEL 87 Query: 393 MGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIERERGVILR-EMQD 569 +G L+ +RE + A+ L + +LA+++ + ++ E R E + Sbjct: 88 LGGQLSTQITREHIILTARFLNEYLEYYARLLAEVVDATKFLPFQLTEEVLPTARIESEL 147 Query: 570 VESNLQEVVFDHLHATAFQGTPLGQTILGP---TKNIKKISKADLQSYIRNHY 719 ++ V LH AF +G + P + +I +I ++Y+++++ Sbjct: 148 FREDILRVAMAKLHEKAFH-RGIGNEVYLPASASPSISEIKDFASKAYVKSNF 199 >SPAC3H1.02c |||metallopeptidase|Schizosaccharomyces pombe|chr 1|||Manual Length = 1036 Score = 44.0 bits (99), Expect = 2e-05 Identities = 42/167 (25%), Positives = 67/167 (40%), Gaps = 13/167 (7%) Frame = +3 Query: 291 ETSKNNGVAHFLEHMAFKGTSKRSQTD-LELLVENMGAHLNAYTSREQTVFYAKCLAND- 464 E N G H LEH+ F G+ K L +NA T + T + D Sbjct: 52 EAHDNLGCPHTLEHLCFMGSKKYPMNGILTKFAGRACGDINACTDVDYTSYELSAAEEDG 111 Query: 465 ----VPV-AVEILADIIQNSSLAEPEIE-----RERGVILREMQDVESNLQEVVFDHLHA 614 +PV A IL+ I+ + + E GV+ EMQ+ +S+ +V+FD + Sbjct: 112 FLRLLPVFADHILSPILSDEAFCTEVYHINGMGEESGVVYSEMQNTQSSETDVMFDCMRT 171 Query: 615 TAFQGTP-LGQTILGPTKNIKKISKADLQSYIRNHYQPGRIVLSGAG 752 + + T G ++K+S ++ Y + Y P I L G Sbjct: 172 SQYPVTSGYYYETGGHPSELRKLSIEKIREYHKEMYVPSNICLIVTG 218 >SPACUNK4.12c |mug138||metallopeptidase|Schizosaccharomyces pombe|chr 1|||Manual Length = 969 Score = 43.2 bits (97), Expect = 4e-05 Identities = 33/133 (24%), Positives = 61/133 (45%), Gaps = 3/133 (2%) Frame = +3 Query: 192 KLTVLDNGLRIA-TEDSGAATATVGLWIDAGSRYETSKNNGVAHFLEHMAFKGTSK-RSQ 365 +L L+N L + D A+ + + GS+ + G+AHF EH+ F GT K + Sbjct: 25 RLIKLENDLEVLLVRDPETDNASAAIDVHIGSQSNPRELLGLAHFCEHLLFMGTKKYPDE 84 Query: 366 TDLELLVENMGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIERE-R 542 + +E+ NAYT+ T +Y + + + A++ A + E +RE R Sbjct: 85 NEYRKYLESHNGISNAYTASNNTNYYFEVSHDALYGALDRFAQFFIDPLFLEECKDREIR 144 Query: 543 GVILREMQDVESN 581 V ++++S+ Sbjct: 145 AVDSEHCKNLQSD 157 >SPBC119.17 ||SPBC577.01|metallopeptidase|Schizosaccharomyces pombe|chr 2|||Manual Length = 992 Score = 35.9 bits (79), Expect = 0.006 Identities = 37/179 (20%), Positives = 67/179 (37%), Gaps = 21/179 (11%) Frame = +3 Query: 279 GSRYETSKNNGVAHFLEHMAFKGTSKRSQTD--LELLVENMGAHLNAYTSREQTVF-YAK 449 G + + G+ H LEH G++K D ++L ++ +NA+T+ + T + +A Sbjct: 78 GFQTPAENDEGIPHILEHTTLCGSNKYPVRDPFFKMLNRSLATFMNAFTASDFTFYPFAT 137 Query: 450 CLANDVPVAVEILADIIQNSSLAEPEIERE------------------RGVILREMQDVE 575 D ++ D L + + +E GV+ EM+ Sbjct: 138 VNTTDYKNLRDVYLDATLFPKLRKLDFLQEGWRFEHADVNDKKSPIIFNGVVYNEMKGQV 197 Query: 576 SNLQEVVFDHLHATAFQGTPLGQTILGPTKNIKKISKADLQSYIRNHYQPGRIVLSGAG 752 S+ + + FQGT G G I + +L + R+HY P + G Sbjct: 198 SDSSYIFYMLFQQHLFQGTAYGFNSGGDPLAIPDLKYEELVKFHRSHYHPSNAKILSYG 256 >SPCC74.06 |mak3|phk2|histidine kinase Mak3 |Schizosaccharomyces pombe|chr 3|||Manual Length = 2344 Score = 29.1 bits (62), Expect = 0.73 Identities = 16/44 (36%), Positives = 22/44 (50%) Frame = -3 Query: 662 GRSKNCLSQWGTLECCCVKVIKHNLLKVTFDILHFAKNDTAFSF 531 GRS C +WG L+ C + N LKVT + F N+ +F Sbjct: 2146 GRSFACKKRWGFLQMPCT---RENFLKVTLQV--FKSNEDTCNF 2184 >SPAC22F8.07c |rtf1||replication termination factor Rtf1|Schizosaccharomyces pombe|chr 1|||Manual Length = 466 Score = 28.7 bits (61), Expect = 0.97 Identities = 9/29 (31%), Positives = 16/29 (55%) Frame = -2 Query: 372 SPSVIFYWYL*KPCVQGNERHHCSWRFHS 286 +PS W L ++ RHHC W++++ Sbjct: 329 NPSSPIQWSLISKNMRNRHRHHCRWKYYT 357 >SPCC584.01c |||sulfite reductase NADPH flavoprotein subunit |Schizosaccharomyces pombe|chr 3|||Manual Length = 1006 Score = 27.9 bits (59), Expect = 1.7 Identities = 11/28 (39%), Positives = 15/28 (53%) Frame = -3 Query: 551 NDTAFSFDFGFGEGGILYDISKDLYCYG 468 N F +F G+ G+ YDI + L YG Sbjct: 641 NRNIFHIEFDLGDSGLTYDIGEALGVYG 668 >SPCC1739.01 ||SPCC1906.05|zf-CCCH type zinc finger protein|Schizosaccharomyces pombe|chr 3|||Manual Length = 547 Score = 27.5 bits (58), Expect = 2.2 Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 1/72 (1%) Frame = +3 Query: 315 AHFLEHMAFKGTSKRSQTDLELLVENMGAHLNAYTSREQTVFYAKCLANDVPVAV-EILA 491 A+F + +G+ S T L V N + ++ RE+ VF + PV++ + + Sbjct: 430 AYFSKSRYVEGSGSMSTTPLATSVNNSYKLPSGFSVREEAVFSSPTTEGSRPVSLARLKS 489 Query: 492 DIIQNSSLAEPE 527 + I S A PE Sbjct: 490 EPIFRSDTASPE 501 >SPBPB2B2.13 |||galactokinase Gal1 |Schizosaccharomyces pombe|chr 2|||Manual Length = 519 Score = 26.6 bits (56), Expect = 3.9 Identities = 11/30 (36%), Positives = 20/30 (66%), Gaps = 1/30 (3%) Frame = +1 Query: 607 FTQQHSKVPHWDKQFLDL-PKILRKSLRLT 693 + ++H K PHWD +D+ + +++ LRLT Sbjct: 306 YYEKHLKQPHWDGSDIDMGVQRMQEMLRLT 335 >SPBC83.11 |||triose phosphate transporter|Schizosaccharomyces pombe|chr 2|||Manual Length = 434 Score = 25.8 bits (54), Expect = 6.8 Identities = 23/107 (21%), Positives = 43/107 (40%) Frame = +3 Query: 228 TEDSGAATATVGLWIDAGSRYETSKNNGVAHFLEHMAFKGTSKRSQTDLELLVENMGAHL 407 T+ SG +GLW+ Y+ SK + + F+ + LEL + M Sbjct: 280 TQGSGIFLTAIGLWL-----YDRSKKGNLYESCKVKEFEKDA------LELEEQTMEDEK 328 Query: 408 NAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIERERGV 548 + +S Q+ FY K + ++ + +I +S + + GV Sbjct: 329 SYPSSGTQSPFYGKNFLPQITPRLDSVVPLISDSPMTPNSVYSNEGV 375 >SPBC19C2.05 |ran1|pat1|serine/threonine protein kinase Ran1|Schizosaccharomyces pombe|chr 2|||Manual Length = 470 Score = 25.8 bits (54), Expect = 6.8 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = +1 Query: 394 WVHT*TPTPPGNKQFFTQNASLMTFP 471 W H TPT P + Q T N+SL P Sbjct: 361 WNHCATPTIPVSLQVLTPNSSLKVDP 386 >SPAC11D3.14c |||oxoprolinase |Schizosaccharomyces pombe|chr 1|||Manual Length = 1260 Score = 25.4 bits (53), Expect = 9.0 Identities = 10/36 (27%), Positives = 20/36 (55%) Frame = -3 Query: 329 FKEMSDTIVLGGFIAGASVDPESYSGSGGSRIFSSN 222 F+ + + + G +I +D ++ + GGSR+F N Sbjct: 328 FEHIYEANIFGLYIQSPQLDIQTVAAGGGSRLFWRN 363 >SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces pombe|chr 2|||Manual Length = 963 Score = 25.4 bits (53), Expect = 9.0 Identities = 10/29 (34%), Positives = 17/29 (58%) Frame = -1 Query: 280 PASIQSPTVAVAAPESSVAIRKPLSSTVS 194 P+S++ P P S ++ + P S+TVS Sbjct: 189 PSSLEKPAGTGDLPSSEISTKAPASTTVS 217 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 3,334,303 Number of Sequences: 5004 Number of extensions: 72846 Number of successful extensions: 201 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 192 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 199 length of database: 2,362,478 effective HSP length: 71 effective length of database: 2,007,194 effective search space used: 369323696 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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