Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30374
(769 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46476| Best HMM Match : No HMM Matches (HMM E-Value=.) 147 1e-35
SB_40817| Best HMM Match : Peptidase_M16_C (HMM E-Value=1.6e-36) 93 2e-19
SB_12959| Best HMM Match : Peptidase_M16_C (HMM E-Value=1e-14) 55 5e-08
SB_7914| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_24529| Best HMM Match : Lectin_C (HMM E-Value=3.4e-27) 30 2.4
SB_59246| Best HMM Match : Podocalyxin (HMM E-Value=0.13) 30 2.4
SB_57246| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_27958| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_26497| Best HMM Match : DUF963 (HMM E-Value=0.24) 29 4.1
SB_16496| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_8816| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_18636| Best HMM Match : GPS (HMM E-Value=8.4) 28 7.2
SB_9417| Best HMM Match : FragX_IP (HMM E-Value=0) 28 7.2
SB_724| Best HMM Match : eIF-3c_N (HMM E-Value=0) 28 9.5
SB_42893| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_14360| Best HMM Match : TFIIS_C (HMM E-Value=0.032) 28 9.5
>SB_46476| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 381
Score = 147 bits (356), Expect = 1e-35
Identities = 67/98 (68%), Positives = 84/98 (85%)
Frame = +3
Query: 474 AVEILADIIQNSSLAEPEIERERGVILREMQDVESNLQEVVFDHLHATAFQGTPLGQTIL 653
AV+ILADIIQNS+L E EIERERGVILREMQ+V++ L+EVVFDHLHATA+QGT LG+TIL
Sbjct: 35 AVDILADIIQNSTLGEAEIERERGVILREMQEVDTQLEEVVFDHLHATAYQGTALGRTIL 94
Query: 654 GPTKNIKKISKADLQSYIRNHYQPGRIVLSGAGGVKHE 767
GP++N+K I++ DL+ YI HY R+VL+ AGGV H+
Sbjct: 95 GPSRNVKSITQQDLKDYINKHYSAPRMVLAAAGGVNHD 132
>SB_40817| Best HMM Match : Peptidase_M16_C (HMM E-Value=1.6e-36)
Length = 888
Score = 93.1 bits (221), Expect = 2e-19
Identities = 46/145 (31%), Positives = 86/145 (59%), Gaps = 3/145 (2%)
Frame = +3
Query: 189 TKLTVLDNGLRIATEDSGAATATVGLWIDAGSRYETSKNNGVAHFLEHMAFKGTSK-RSQ 365
T +T L NG+++A+E+S +TVG+ ID GSRYE NGV H +E MAF+ T+K S
Sbjct: 417 THVTTLPNGIKVASEESFGQFSTVGVVIDGGSRYEVDHPNGVTHVIEKMAFQSTAKFPSH 476
Query: 366 TDLELLVENMGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIERERG 545
D+ +E +G + + R+ V+ + +P+AVE+L++ + + E++ ++
Sbjct: 477 DDIMQELEPVGGMADCTSFRDAIVYGTSSFTSGLPLAVEVLSEAVMRPQITSQEVDEQKM 536
Query: 546 VILREMQDVESNL--QEVVFDHLHA 614
++ E++++E L + ++ D +HA
Sbjct: 537 LVQFELENLEMRLDPEPILTDMVHA 561
>SB_12959| Best HMM Match : Peptidase_M16_C (HMM E-Value=1e-14)
Length = 593
Score = 55.2 bits (127), Expect = 5e-08
Identities = 23/50 (46%), Positives = 36/50 (72%)
Frame = +3
Query: 192 KLTVLDNGLRIATEDSGAATATVGLWIDAGSRYETSKNNGVAHFLEHMAF 341
++T LDNGL++A+ ++ + + VGL+ DAGSRYET N G+ H L + A+
Sbjct: 31 QVTTLDNGLKVASLETYSPISRVGLFFDAGSRYETDSNLGITHMLRNAAY 80
>SB_7914| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 233
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +3
Query: 252 ATVGLWIDAGSRYETSKNNGVAHFLEHMAFKGTSK-RSQTDLELLVENMGAHLNAYTSRE 428
A L I GS + G+AHFLEHM F G+ K + + ++ G + NA+T E
Sbjct: 173 AAAALCIGTGSFSDPDDIPGLAHFLEHMVFMGSEKYPDENSFDAFIKKHGGNSNAFTDCE 232
Query: 429 Q 431
+
Sbjct: 233 R 233
>SB_24529| Best HMM Match : Lectin_C (HMM E-Value=3.4e-27)
Length = 644
Score = 29.9 bits (64), Expect = 2.4
Identities = 22/70 (31%), Positives = 33/70 (47%)
Frame = +3
Query: 513 LAEPEIERERGVILREMQDVESNLQEVVFDHLHATAFQGTPLGQTILGPTKNIKKISKAD 692
L+E E + GV L ++ + L+EVV L G PL ILG N S A+
Sbjct: 505 LSEAMKEEDDGVFLEKLHENLPPLKEVVVAFLKGVVHAGIPLNIIILGMDGN----SNAN 560
Query: 693 LQSYIRNHYQ 722
+Q + + Y+
Sbjct: 561 VQRLLPDTYK 570
>SB_59246| Best HMM Match : Podocalyxin (HMM E-Value=0.13)
Length = 1027
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = +3
Query: 75 TKMLKVATTLRVISSQGNQVRTLATAAAYKQALVNVPPTKLTVLDNGLRIATEDSGAATA 254
T + A T+ +++ V T+ATAAA + T TV + T + AAT
Sbjct: 588 TTVTTAAATVTTVTTAAATVTTVATAAATVTTVTTAAATLTTVTTAAATLTTVTTAAATL 647
Query: 255 T 257
T
Sbjct: 648 T 648
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/62 (29%), Positives = 25/62 (40%)
Frame = +3
Query: 72 TTKMLKVATTLRVISSQGNQVRTLATAAAYKQALVNVPPTKLTVLDNGLRIATEDSGAAT 251
TT V T +++ V T+ TAAA + T TV + T + AAT
Sbjct: 557 TTAAATVTTAAATVTTAAATVTTVTTAAATVTTVTTAAATVTTVTTAAATVTTVATAAAT 616
Query: 252 AT 257
T
Sbjct: 617 VT 618
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/61 (27%), Positives = 26/61 (42%)
Frame = +3
Query: 75 TKMLKVATTLRVISSQGNQVRTLATAAAYKQALVNVPPTKLTVLDNGLRIATEDSGAATA 254
T + A T+ +++ V T+ TAAA + T TV + T + AAT
Sbjct: 578 TTVTTAAATVTTVTTAAATVTTVTTAAATVTTVATAAATVTTVTTAAATLTTVTTAAATL 637
Query: 255 T 257
T
Sbjct: 638 T 638
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/61 (27%), Positives = 26/61 (42%)
Frame = +3
Query: 75 TKMLKVATTLRVISSQGNQVRTLATAAAYKQALVNVPPTKLTVLDNGLRIATEDSGAATA 254
T + A T+ +++ V T+ TAAA + T TV + T + AAT
Sbjct: 598 TTVTTAAATVTTVATAAATVTTVTTAAATLTTVTTAAATLTTVTTAAATLTTVTTAAATL 657
Query: 255 T 257
T
Sbjct: 658 T 658
>SB_57246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 737
Score = 29.5 bits (63), Expect = 3.1
Identities = 19/65 (29%), Positives = 29/65 (44%)
Frame = +1
Query: 484 SLLISYRIPPSPNPKSNENAVSFFAKCKMSKVTFRRLCLITFTQQHSKVPHWDKQFLDLP 663
+ L+++ +PP P+ E A K K +R CLI Q SK+ + +Q L
Sbjct: 550 TFLLNHYLPPQPSDDKVEKAEIQQEKEAQKKSNMQRSCLIVCEQWRSKIFRFLQQVHGLE 609
Query: 664 KILRK 678
L K
Sbjct: 610 AKLEK 614
>SB_27958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 603
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/58 (20%), Positives = 29/58 (50%)
Frame = +3
Query: 441 YAKCLANDVPVAVEILADIIQNSSLAEPEIERERGVILREMQDVESNLQEVVFDHLHA 614
+ KC + + + +L + + LA + RG+ +QD+++++Q+ + H A
Sbjct: 306 WLKCHPDQLRTVLPVLLGGLSQADLASASTQALRGICEECVQDLDTDVQQTILTHCQA 363
>SB_26497| Best HMM Match : DUF963 (HMM E-Value=0.24)
Length = 889
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -1
Query: 274 SIQSPTVAVAAPESSVAIRKPLSSTVSLVGGTFTNA 167
S QS + AV+AP SS R P+S+ GG F+ +
Sbjct: 449 STQSISQAVSAPSSSTPSRVPISAAPPAGGGLFSGS 484
>SB_16496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1275
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = -3
Query: 677 FLNIFGRSKNCLSQWGTLECCCVKVIKHNLLKVTFDIL 564
F +FG + CLS +G L C V V + ++L+ T+++L
Sbjct: 34 FRALFG-AVACLSLFGNLLLCVVMVRRRSMLRKTYNVL 70
>SB_8816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 82
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = -3
Query: 677 FLNIFGRSKNCLSQWGTLECCCVKVIKHNLLKVTFDIL 564
F +FG + CLS +G L C V V + ++L+ T+++L
Sbjct: 34 FRALFG-AVACLSLFGNLLLCVVMVRRRSMLRKTYNVL 70
>SB_18636| Best HMM Match : GPS (HMM E-Value=8.4)
Length = 513
Score = 28.3 bits (60), Expect = 7.2
Identities = 28/121 (23%), Positives = 52/121 (42%)
Frame = +3
Query: 372 LELLVENMGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIERERGVI 551
L+ L +NM + A E + Y CL++D P+ V++ ADI N+ E+E
Sbjct: 96 LQKLNKNMESFYPAEDYEEASEGY--CLSDDNPMNVDVEADI--NNIAGSGPTEKEDSTS 151
Query: 552 LREMQDVESNLQEVVFDHLHATAFQGTPLGQTILGPTKNIKKISKADLQSYIRNHYQPGR 731
++ D L ++ D + G L ++++IS + I+ H+ P
Sbjct: 152 ATDIVDYRHQL-DINSDEKGPKIIESVATGANKL----HLQRISAEQCKLKIKQHFTPEN 206
Query: 732 I 734
+
Sbjct: 207 V 207
>SB_9417| Best HMM Match : FragX_IP (HMM E-Value=0)
Length = 875
Score = 28.3 bits (60), Expect = 7.2
Identities = 24/82 (29%), Positives = 36/82 (43%)
Frame = +3
Query: 348 TSKRSQTDLELLVENMGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPE 527
T + T +ELL E + YT R + ++D P VEI ++ + EPE
Sbjct: 16 TKRPCHTQIELLEEGEKYAVVLYTWRSCSRAVPSVKSDDQPNRVEIYEKTVE---VLEPE 72
Query: 528 IERERGVILREMQDVESNLQEV 593
I + +G + M V QEV
Sbjct: 73 INKLKGFMHFAMTVVTRFCQEV 94
>SB_724| Best HMM Match : eIF-3c_N (HMM E-Value=0)
Length = 564
Score = 27.9 bits (59), Expect = 9.5
Identities = 25/105 (23%), Positives = 41/105 (39%)
Frame = +3
Query: 267 WIDAGSRYETSKNNGVAHFLEHMAFKGTSKRSQTDLELLVENMGAHLNAYTSREQTVFYA 446
W DA R + SK N A + SK + D+E E++G L T F
Sbjct: 56 WEDAEGRKKLSKINARALATLRQKLRKYSKDFEDDIEKYRESIGQPLPVVVQALSTTFCD 115
Query: 447 KCLANDVPVAVEILADIIQNSSLAEPEIERERGVILREMQDVESN 581
++V ++E D + PE +++G R+ E +
Sbjct: 116 VLEVDNVLYSIE-SEDDSDDDFAPRPESFKKKGAQTRKAAKTEED 159
>SB_42893| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 950
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +1
Query: 574 KVTFRRLCLITFTQQHSKVPHWDKQFLDLPKILRKSLRLTY 696
K F RLC++ F + P +K+ P + +SLR T+
Sbjct: 893 KAAFERLCIVRFAAVLIRSPVAEKRRNGFPVAIPRSLRFTW 933
>SB_14360| Best HMM Match : TFIIS_C (HMM E-Value=0.032)
Length = 299
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/37 (29%), Positives = 15/37 (40%)
Frame = -2
Query: 354 YWYL*KPCVQGNERHHCSWRFHSGSQRRSRVLQWQWR 244
Y+ PC R+ W HSG+ Q +WR
Sbjct: 115 YYQSRSPCGDSGRRNTTEWELHSGAFHTCYTCQRKWR 151
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,126,394
Number of Sequences: 59808
Number of extensions: 573680
Number of successful extensions: 1360
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1356
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2083999566
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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