Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30372
         (341 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.          23   2.4  
AY745222-1|AAU93489.1|  276|Anopheles gambiae cytochrome P450 pr...    23   4.1  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   4.1  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    22   5.5  
AF043440-1|AAC05665.1|  234|Anopheles gambiae putative pupal-spe...    22   7.2  
AF043436-1|AAC05661.1|  263|Anopheles gambiae putative pupal-spe...    22   7.2  
AJ237664-1|CAB40379.2|   81|Anopheles gambiae putative infection...    21   9.6  

>AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.
          Length = 356

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +2

Query: 116 PSTFTTVTS*HCISSYMRALDYQHP 190
           PS +    + H IS  M+   YQHP
Sbjct: 315 PSRWIACDTLHAISKVMKECWYQHP 339


>AY745222-1|AAU93489.1|  276|Anopheles gambiae cytochrome P450
           protein.
          Length = 276

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 56  FLPNLFEMRVNGVISLR 6
           FL  L EM+ NG + +R
Sbjct: 61  FLQQLLEMKANGALDMR 77


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +1

Query: 7   RKEITPLTRISNKLGRNVVTNFVRNHS 87
           R  +T     +N++ + VVTN +RNHS
Sbjct: 748 RPHVTMAVEKANRVVK-VVTNVMRNHS 773


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +1

Query: 91  GGIPGENLPFDIHNRY 138
           G +   NLP  IHN Y
Sbjct: 530 GSLDFSNLPLSIHNSY 545


>AF043440-1|AAC05665.1|  234|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 234

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 183 STLSHHPSPAFEEV 224
           ST+ HH +PA + V
Sbjct: 33  STIQHHAAPAIQHV 46


>AF043436-1|AAC05661.1|  263|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2c protein.
          Length = 263

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 183 STLSHHPSPAFEEV 224
           ST+ HH +PA + V
Sbjct: 33  STIQHHAAPAIQHV 46


>AJ237664-1|CAB40379.2|   81|Anopheles gambiae putative infection
          responsive shortpeptide protein.
          Length = 81

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -2

Query: 55 FCPICLRCESMG 20
          + P C RC+S+G
Sbjct: 25 YAPTCARCKSIG 36


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 330,884
Number of Sequences: 2352
Number of extensions: 6255
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 24075240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)