Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30370
(713 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_0909 - 22515326-22515418,22515992-22516150,22516583-225166... 32 0.39
05_04_0331 + 20317482-20318174,20318518-20318685,20318773-203188... 32 0.52
05_07_0294 - 29038259-29038420,29038526-29038632,29038889-290390... 31 0.69
02_01_0237 - 1570395-1571225,1572225-1572245,1572336-1572506,157... 31 0.69
01_01_0829 + 6471032-6471870,6472490-6472685,6472772-6472956,647... 31 0.69
02_01_0625 + 4690607-4690696,4692673-4692734,4692867-4693230 31 1.2
07_03_0217 + 15303794-15304049,15304130-15304134 30 1.6
08_02_0780 + 21148283-21148634,21148730-21149146,21150194-21150534 29 2.8
06_03_0556 - 22097423-22097445,22097579-22097613,22097873-220979... 29 2.8
08_02_0696 + 20137167-20137485,20137601-20137740,20137841-20137951 29 3.7
02_04_0489 + 23404757-23404812,23406170-23406296,23406418-234064... 29 4.8
02_01_0674 + 5020118-5020202,5020301-5020436,5021075-5021140,502... 29 4.8
09_02_0255 + 6338611-6338655,6338694-6338909 28 6.4
04_01_0575 - 7454421-7455707 28 6.4
01_06_0921 - 33017892-33018953 28 6.4
01_05_0344 + 21172101-21172233,21172332-21172402,21172492-211726... 28 6.4
04_04_1623 - 34846056-34846223,34846547-34846644,34846738-348468... 28 8.5
03_06_0674 - 35449373-35449465,35449959-35450112,35450763-354508... 28 8.5
02_05_0021 - 25101738-25101881,25119662-25120331,25122562-251237... 28 8.5
>08_02_0909 -
22515326-22515418,22515992-22516150,22516583-22516658,
22517980-22518141,22518826-22519259,22519723-22521414
Length = 871
Score = 32.3 bits (70), Expect = 0.39
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +2
Query: 263 LASGALAAGTIASPWSTPAGAPDTNGSGGADA 358
LASGA+A+G +ASP +TPA + G+ GA +
Sbjct: 48 LASGAVASG-VASPTTTPASSAPAAGADGASS 78
>05_04_0331 +
20317482-20318174,20318518-20318685,20318773-20318895,
20319094-20319165,20321217-20321431,20321521-20321593,
20322092-20322568,20322970-20323077,20323184-20323192,
20323193-20323552
Length = 765
Score = 31.9 bits (69), Expect = 0.52
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = +2
Query: 266 ASGALAAGTIASPWSTPAGAPDTNGSGGADAKHLDVGDASDDEKDMSAADA 418
A G TIA + GA D+ +G A GDA D E+D D+
Sbjct: 155 AVGGAQGSTIAGDQADARGAQDSTAAGDAQDSTTAAGDAHDSEEDFGDYDS 205
>05_07_0294 -
29038259-29038420,29038526-29038632,29038889-29039093,
29039173-29039536,29039588-29039772,29039879-29040080,
29040697-29041589
Length = 705
Score = 31.5 bits (68), Expect = 0.69
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +2
Query: 215 SVISTVTMHPAGYYANLASGALAAGTIASPWSTPAGAPDTNGSGGADAKH 364
S +S + + P G A +S + +AG+ SP AGA G GG H
Sbjct: 38 SPVSPLRLRPGGAAATPSSSSSSAGSAKSPALCNAGAGVGRGGGGGRGSH 87
>02_01_0237 -
1570395-1571225,1572225-1572245,1572336-1572506,
1572942-1573070,1574364-1574657
Length = 481
Score = 31.5 bits (68), Expect = 0.69
Identities = 22/61 (36%), Positives = 27/61 (44%)
Frame = +2
Query: 335 NGSGGADAKHLDVGDASDDEKDMSAADAEGVWSPDIEQSFQEALAIYPPCGRRKIILSDE 514
NG GGADAK D + DD+ D D E + EQ A PP GR + +
Sbjct: 31 NGRGGADAKE-DYLNWDDDDDDDEDEDEE---EEEAEQVMAWAAKCRPPAGRNVVNVDSF 86
Query: 515 G 517
G
Sbjct: 87 G 87
>01_01_0829 +
6471032-6471870,6472490-6472685,6472772-6472956,
6473206-6473539,6473629-6473833,6474927-6475033,
6475117-6475269
Length = 672
Score = 31.5 bits (68), Expect = 0.69
Identities = 36/120 (30%), Positives = 52/120 (43%), Gaps = 15/120 (12%)
Frame = +2
Query: 161 GLLLFKILSKT*VTNGITSVISTVTMHPAGYYANLASGALAAGTIASPWSTPAGAPDTNG 340
G L+F S + T+ +T+ + + P+G A S AA T +P A D G
Sbjct: 105 GPLIFTSCSSS-ATSPLTNALPAGNICPSGRLAKPLSSCSAAATPPAPTPPRAARHDVLG 163
Query: 341 SGGADAKHLDV-----GDASDDEKD------MSAADAEGVWSPDIEQ----SFQEALAIY 475
SG A+ H + G E+D MS+AD E + EQ F+EAL +Y
Sbjct: 164 SGTANYGHGSIVRSRSGGVVVAEEDAVVRRAMSSADPEELKKAGNEQYKKGYFEEALRLY 223
>02_01_0625 + 4690607-4690696,4692673-4692734,4692867-4693230
Length = 171
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +2
Query: 320 GAPDTNGSGGADAKHLDVGDASDDEKDMSAADAEG 424
G P+ NG GG+D D G DD++D D EG
Sbjct: 108 GDPEANGEGGSDD---DDGGEDDDDEDEDGDDDEG 139
>07_03_0217 + 15303794-15304049,15304130-15304134
Length = 86
Score = 30.3 bits (65), Expect = 1.6
Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = +2
Query: 233 TMH-PAGYYANLASGALAAGTIASPWST-PAGAPDTNGSGGADAKHLDVGDASDDEKDMS 406
T H P+G + AS A G A PW GA +GG D + G A+ D + +
Sbjct: 15 TAHLPSGLVEHEASAATRGGWGAGPWGAWTVGARPRRAAGGEDGR----GAAARDRRGAA 70
Query: 407 AADAEG 424
A EG
Sbjct: 71 AQGREG 76
>08_02_0780 + 21148283-21148634,21148730-21149146,21150194-21150534
Length = 369
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/59 (23%), Positives = 23/59 (38%)
Frame = +2
Query: 305 WSTPAGAPDTNGSGGADAKHLDVGDASDDEKDMSAADAEGVWSPDIEQSFQEALAIYPP 481
++ G G+GG H + + S A G W P + +E +A+Y P
Sbjct: 45 YNNGGGGGGGGGNGGGGGDHQESSSSGGGGGQSSRLAARGHWRPAEDAKLRELVALYGP 103
>06_03_0556 -
22097423-22097445,22097579-22097613,22097873-22097941,
22113969-22114807
Length = 321
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +2
Query: 263 LASGALAAGTIASPWSTPAGAPDTNGSGGADAKHLDVGDASDDEKDMSAAD 415
+A + G +A T D +D K ++ GD+SDDE D++ A+
Sbjct: 97 VAPVGIQPGGVADEGETVGAIVDEMEREDSDNKRVEEGDSSDDETDINPAE 147
>08_02_0696 + 20137167-20137485,20137601-20137740,20137841-20137951
Length = 189
Score = 29.1 bits (62), Expect = 3.7
Identities = 25/72 (34%), Positives = 30/72 (41%), Gaps = 7/72 (9%)
Frame = +2
Query: 218 VISTVTMHPAGYYANLASGALAAGTIAS-PWSTPA------GAPDTNGSGGADAKHLDVG 376
V + V HP G L A AA + S P A A + G GG A+H VG
Sbjct: 9 VAAVVIQHPGGKVERLYWPATAADVMRSNPGHYVALVLLRVSASSSGGGGGGKAEHSAVG 68
Query: 377 DASDDEKDMSAA 412
A DE +AA
Sbjct: 69 AAVGDESGGAAA 80
>02_04_0489 +
23404757-23404812,23406170-23406296,23406418-23406487,
23406997-23407102,23407185-23407296,23407792-23407914,
23408017-23408176,23408300-23408376,23408474-23408526,
23408700-23408754,23409049-23409683,23410412-23410733,
23410838-23411146,23411468-23411470
Length = 735
Score = 28.7 bits (61), Expect = 4.8
Identities = 29/107 (27%), Positives = 39/107 (36%), Gaps = 3/107 (2%)
Frame = +2
Query: 197 VTNGITSVISTVTMHPAGYYANLASGA---LAAGTIASPWSTPAGAPDTNGSGGADAKHL 367
+ +G + + V P + L A A IAS + PAGA DT+ G DA
Sbjct: 330 LASGENTTVILVQFKPGAFQYQLVDPAGFGTAVSNIASTSAAPAGASDTSDEGVDDAATA 389
Query: 368 DVGDASDDEKDMSAADAEGVWSPDIEQSFQEALAIYPPCGRRKIILS 508
D D S A+ D E Y P G +I+ S
Sbjct: 390 RPTVMGYD-ADSSTGSADATVDSD-EVDPNATADSYNPRGHAEIVAS 434
>02_01_0674 +
5020118-5020202,5020301-5020436,5021075-5021140,
5021219-5021290,5021362-5021433,5024242-5024301,
5024494-5024565,5024655-5024720,5024798-5024863,
5024945-5025273,5025713-5025969,5026213-5026484,
5026580-5026715,5026833-5026972,5027051-5027207,
5027476-5027634
Length = 714
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +2
Query: 209 ITSVISTVTMHPAGYYANLASGALAAGTIASPWSTPAGAPDTNGSGGAD 355
+ + V+ PAG + AS A A G + S W++P+ + GG D
Sbjct: 8 LVGFLLAVSSAPAGATTD-ASDAAALGNLYSSWNSPSQLAGWSAGGGGD 55
>09_02_0255 + 6338611-6338655,6338694-6338909
Length = 86
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 296 ASPWSTPAGAPDTNGSGGADAKHLDVGDASDDEKDMSAA 412
AS P G+P+ +GS G + D +D+E++ +AA
Sbjct: 22 ASAAVQPEGSPEASGSAGFGSAEAGDDDDNDEEEEAAAA 60
>04_01_0575 - 7454421-7455707
Length = 428
Score = 28.3 bits (60), Expect = 6.4
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Frame = +2
Query: 170 LFKILSKT*VTNGITS----VISTVTMHPAGYYANLASGALAAGTIASPWSTPAG 322
L+ LS T TN IT+ V+S V P A+ GA A +ASP TP G
Sbjct: 261 LYLGLSNT--TNAITAYRIKVVSAVQPPPLQAQASHLQGACPASAVASPSITPTG 313
>01_06_0921 - 33017892-33018953
Length = 353
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +2
Query: 263 LASGALAAGTIASPWSTPAGAPDTNGSGGADAKHLDVGDASDDEKDMSAAD 415
+A + G +A T D +D + ++ GD+SDDE D++ A+
Sbjct: 97 VAPVGIQPGGVADEGETVGAIVDEMEKEDSDNERVEEGDSSDDETDINPAE 147
>01_05_0344 +
21172101-21172233,21172332-21172402,21172492-21172653,
21172995-21173100,21174242-21174439,21174565-21174631,
21174868-21175051,21175145-21175324,21175408-21175587,
21176472-21176627,21177487-21178067,21178535-21178640,
21179152-21179331,21179620-21179892
Length = 858
Score = 28.3 bits (60), Expect = 6.4
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Frame = +2
Query: 308 STPAGAPDTNGSGGADAK-HLDVGDA-SDDEKDMSAADAEG--VWSPDIEQSFQEALAIY 475
S P+GAP G GG ++ ++ GD+ D D A D +G V D + + +EA A
Sbjct: 551 SCPSGAPHRGGGGGGGSRAGMEGGDSVLDAVLDEEALDYDGDDVEMADADDAVEEAQAQE 610
Query: 476 PP 481
P
Sbjct: 611 DP 612
>04_04_1623 -
34846056-34846223,34846547-34846644,34846738-34846829,
34847096-34847202,34847385-34847490,34848108-34848547
Length = 336
Score = 27.9 bits (59), Expect = 8.5
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
Frame = +2
Query: 308 STPA--GAPDTNGSGGADAKHLDVG--DASDDEKDMSAADAEGVWSPDIEQSFQEALA 469
STP A DT + LD G D SD S +D EGV S ++++ F A A
Sbjct: 42 STPTFPSAADTPAAPAPPPASLDGGHGDTSDGSGSDSDSDWEGVESTELDEDFSAASA 99
>03_06_0674 -
35449373-35449465,35449959-35450112,35450763-35450860,
35450947-35451234,35451313-35451503,35451789-35452006,
35452314-35452653,35452726-35453167
Length = 607
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 299 SPWSTPAGAPDTNGSGGADAKHLDV 373
SP ST AG P G+G A + H V
Sbjct: 555 SPCSTVAGVPKNKGNGAASSTHKSV 579
>02_05_0021 -
25101738-25101881,25119662-25120331,25122562-25123779,
25123859-25124109
Length = 760
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +2
Query: 263 LASGALAAGTIASPWSTPAGAPDTNGSGGADAKHLDVGDASDDEKDMSAAD 415
+A + G +A T D +D + ++ GD+SDDE D++ A+
Sbjct: 638 VAPVGIQLGGVADEGETVGAIVDEMEREDSDNERVEEGDSSDDETDINPAE 688
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,264,112
Number of Sequences: 37544
Number of extensions: 354363
Number of successful extensions: 1359
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1306
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1356
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1851002996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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