Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30370
         (713 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g16710.1 68414.m02003 TAZ zinc finger family protein / zinc f...    30   1.3  
At4g08670.1 68417.m01428 protease inhibitor/seed storage/lipid t...    29   3.1  
At5g28400.1 68418.m03448 expressed protein                             29   4.0  
At5g28320.1 68418.m03438 expressed protein This is likely a pseu...    29   4.0  
At2g11910.2 68415.m01278 expressed protein                             29   4.0  
At2g11910.1 68415.m01277 expressed protein                             29   4.0  
At2g23240.2 68415.m02776 plant EC metallothionein-like family 15...    28   7.1  
At1g12410.1 68414.m01434 ATP-dependent Clp protease proteolytic ...    28   7.1  
At4g21400.1 68417.m03091 protein kinase family protein contains ...    27   9.3  
At3g61780.1 68416.m06931 expressed protein ; expression supporte...    27   9.3  
At1g12500.1 68414.m01447 phosphate translocator-related low simi...    27   9.3  

>At1g16710.1 68414.m02003 TAZ zinc finger family protein / zinc
           finger (ZZ type) family protein contains Pfam profiles
           PF02135: TAZ zinc finger, PF00569: Zinc finger, ZZ type
          Length = 1706

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
 Frame = +2

Query: 239 HPAGYYANLASGALAAGTIASPWSTPAGAPDT--NGSGGADAKHLDVGDA 382
           H  G  +++ S  +AAG      S P+GA ++  NG  GA+ K +D G +
Sbjct: 276 HTGGQNSHMLSNHMAAGVRPDMQSKPSGAANSSVNGDVGANEKIVDSGSS 325


>At4g08670.1 68417.m01428 protease inhibitor/seed storage/lipid
           transfer protein (LTP) family protein contains Pfam
           protease inhibitor/seed storage/LTP family domain
           PF00234
          Length = 208

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = +2

Query: 263 LASGALAAGTIASPWSTPAGAPDTNGSGGADAKHLDVGDASDDEKDMSA 409
           + SGA   G  ASP S  AGAP T+ S     +      +SD+   M+A
Sbjct: 128 ITSGATTPG--ASPVSPSAGAPTTSPSAAKSPETSATSPSSDETPSMTA 174


>At5g28400.1 68418.m03448 expressed protein
          Length = 996

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 15/53 (28%), Positives = 29/53 (54%)
 Frame = +2

Query: 485 GRRKIILSDEGKMYGRNELIARYIKLRTGKTRTRKQVSSHIQVLARRKLREIQ 643
           G  K ++S E   + RNEL++   K++  + +     SSH+++    K+ EI+
Sbjct: 282 GLEKPLMSFEKPKFDRNELMSSISKVKGSEKKLELVNSSHVELDFDDKIHEIK 334


>At5g28320.1 68418.m03438 expressed protein This is likely a
           pseudogene.
          Length = 967

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 15/53 (28%), Positives = 29/53 (54%)
 Frame = +2

Query: 485 GRRKIILSDEGKMYGRNELIARYIKLRTGKTRTRKQVSSHIQVLARRKLREIQ 643
           G  K ++S E   + RNEL++   K++  + +     SSH+++    K+ EI+
Sbjct: 271 GLEKPLMSFEKPKFDRNELMSSISKVKGSEKKLELVNSSHVELDFDDKIHEIK 323


>At2g11910.2 68415.m01278 expressed protein
          Length = 168

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +2

Query: 314 PAGAPDTNGSGGADAKHLDVGDASDDEKDMSAADAE 421
           P   P TNG GG+D +  D  +  +D++D    D E
Sbjct: 113 PEDDPVTNGGGGSDDEDDDDEEGDNDDEDEDNEDEE 148


>At2g11910.1 68415.m01277 expressed protein
          Length = 168

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +2

Query: 314 PAGAPDTNGSGGADAKHLDVGDASDDEKDMSAADAE 421
           P   P TNG GG+D +  D  +  +D++D    D E
Sbjct: 113 PEDDPVTNGGGGSDDEDDDDEEGDNDDEDEDNEDEE 148


>At2g23240.2 68415.m02776 plant EC metallothionein-like family 15
           protein identical to EC protein homolog 2 (SP:Q42377)
           {Arabidopsis thaliana}; identical to an EST:
           GB:X92116:ATECPRHOM; contains a vertebrate
           metallothionein signature (PS00203); contains Pfam
           profile PF02068: Plant PEC family metallothionein
          Length = 84

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -3

Query: 696 CDVPACRPGCQNCTLSLA*ISRSFRLASTCMCDETC 589
           C  P+  PG ++C L ++  S   +  +TC C E C
Sbjct: 17  CGCPSPCPGGESCRLMMSEASGGDQEHNTCPCGEHC 52


>At1g12410.1 68414.m01434 ATP-dependent Clp protease proteolytic
           subunit (ClpP2) identical to nClpP2 GI:5360589 from
           [Arabidopsis thaliana]
          Length = 279

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 29/122 (23%), Positives = 50/122 (40%)
 Frame = +2

Query: 215 SVISTVTMHPAGYYANLASGALAAGTIASPWSTPAGAPDTNGSGGADAKHLDVGDASDDE 394
           S+ S V  H  G   NLA   LAAG     ++ P          GA     D  D  ++ 
Sbjct: 153 SLKSPVGTHCVGLAYNLAGFLLAAGEKGHRFAMPLSRIALQSPAGAARGQAD--DIQNEA 210

Query: 395 KDMSAADAEGVWSPDIEQSFQEALAIYPPCGRRKIILSDEGKMYGRNELIARYIKLRTGK 574
           K++S    + +++   + + Q A  ++    R K   ++E   YG  + I R  +++   
Sbjct: 211 KELSRI-RDYLFNELAKNTGQPAERVFKDLSRVKRFNAEEAIEYGLIDKIVRPPRIKEDA 269

Query: 575 TR 580
            R
Sbjct: 270 PR 271


>At4g21400.1 68417.m03091 protein kinase family protein contains
           Pfam domain PF00069: Protein kinase domain
          Length = 711

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = +2

Query: 203 NGITSVISTVTMHPAGYYANLASG 274
           NG+ S +S++T  P G+Y NL+SG
Sbjct: 55  NGLVSSLSSLTSKPYGFY-NLSSG 77


>At3g61780.1 68416.m06931 expressed protein ; expression supported
           by MPSS
          Length = 1121

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 15/54 (27%), Positives = 28/54 (51%)
 Frame = +2

Query: 485 GRRKIILSDEGKMYGRNELIARYIKLRTGKTRTRKQVSSHIQVLARRKLREIQA 646
           G  K ++S E   + RNEL+    K++  + +     S H+++    K+ EI+A
Sbjct: 298 GLEKPLMSFEKPKFDRNELMTSISKVKGSEKKLELVNSPHVELDFVDKIHEIKA 351


>At1g12500.1 68414.m01447 phosphate translocator-related low
           similarity to glucose-6-phosphate/phosphate-translocator
           precursor [Zea mays] GI:2997589,
           phosphoenolpyruvate/phosphate translocator precursor
           [Mesembryanthemum crystallinum] GI:9295275,
           SP|P21727|CPTR_PEA Triose phosphate/phosphate
           translocator, chloroplast precursor (CTPT) {Pisum
           sativum}
          Length = 361

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 8/72 (11%)
 Frame = -3

Query: 627 FRLASTCMCDETCFLVRVLPVLSLIYLAINS--------FLPYILPSSERIILRRPQGGY 472
           F    TC  + T   + +LPV+S I LA NS        FL  +  ++ R +    QG  
Sbjct: 168 FSFLITCKTESTEVYLALLPVVSGIVLASNSEPSFHLFGFLICVASTAGRALKSVVQGII 227

Query: 471 IASASWKLCSMS 436
           + S S KL SM+
Sbjct: 228 LTSESEKLHSMN 239


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,210,267
Number of Sequences: 28952
Number of extensions: 265228
Number of successful extensions: 724
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 724
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1545769616
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)