Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30366
         (720 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68119-5|CAA92196.1|  102|Caenorhabditis elegans Hypothetical pr...    43   3e-04
U49947-3|AAK68211.1|  114|Caenorhabditis elegans Hypothetical pr...    42   3e-04
AL117203-9|CAB60420.3|  675|Caenorhabditis elegans Hypothetical ...    37   0.013
Z81106-5|CAB03223.3|  432|Caenorhabditis elegans Hypothetical pr...    31   0.83 
AL033536-12|CAD45609.2|  432|Caenorhabditis elegans Hypothetical...    31   0.83 
AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical ...    29   3.3  

>Z68119-5|CAA92196.1|  102|Caenorhabditis elegans Hypothetical
           protein T18D3.7 protein.
          Length = 102

 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 20/28 (71%), Positives = 23/28 (82%)
 Frame = +3

Query: 636 ASGTSAVAIDNKIEQAMDLVKSHLMFAV 719
           A+  + VAIDNKI QAMDLVK+HL FAV
Sbjct: 27  ATSNTVVAIDNKIVQAMDLVKTHLTFAV 54


>U49947-3|AAK68211.1|  114|Caenorhabditis elegans Hypothetical
           protein C30G4.7 protein.
          Length = 114

 Score = 42.3 bits (95), Expect = 3e-04
 Identities = 19/20 (95%), Positives = 20/20 (100%)
 Frame = +3

Query: 660 IDNKIEQAMDLVKSHLMFAV 719
           IDNKIEQAMDLVK+HLMFAV
Sbjct: 51  IDNKIEQAMDLVKTHLMFAV 70


>AL117203-9|CAB60420.3|  675|Caenorhabditis elegans Hypothetical
           protein Y48C3A.12 protein.
          Length = 675

 Score = 37.1 bits (82), Expect = 0.013
 Identities = 16/20 (80%), Positives = 19/20 (95%)
 Frame = +3

Query: 660 IDNKIEQAMDLVKSHLMFAV 719
           IDNKIEQAM+LVK+HL +AV
Sbjct: 480 IDNKIEQAMELVKTHLTYAV 499


>Z81106-5|CAB03223.3|  432|Caenorhabditis elegans Hypothetical
           protein R06C1.6 protein.
          Length = 432

 Score = 31.1 bits (67), Expect = 0.83
 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = -2

Query: 398 GGRNRPP-HNTPEALPARGTRPNAPKHPRLSSQ 303
           G RN PP H  P   P   ++ N+P HP+L  Q
Sbjct: 213 GQRNSPPNHGYPNMSPYMTSQMNSPMHPQLQQQ 245


>AL033536-12|CAD45609.2|  432|Caenorhabditis elegans Hypothetical
           protein R06C1.6 protein.
          Length = 432

 Score = 31.1 bits (67), Expect = 0.83
 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = -2

Query: 398 GGRNRPP-HNTPEALPARGTRPNAPKHPRLSSQ 303
           G RN PP H  P   P   ++ N+P HP+L  Q
Sbjct: 213 GQRNSPPNHGYPNMSPYMTSQMNSPMHPQLQQQ 245


>AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical
           protein Y18D10A.1 protein.
          Length = 1634

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 29/84 (34%), Positives = 33/84 (39%), Gaps = 6/84 (7%)
 Frame = -2

Query: 416 PS*RACGGRNRPPH--NTPEALPARGTRPNAPK-HPRLSSQA---ERLIPARTALCPCIS 255
           PS    G R R P   +T    PA      AP+  PR  S A   E   P   A    + 
Sbjct: 513 PSPSTPGRRGRRPRTLSTMSMEPAAAAVTPAPRGRPRSRSAAKVSENTEPLSEAPSAPVK 572

Query: 254 IGESRLRSRCRLIFQPDSWPQTSS 183
            G  R RSR  +    DS P TSS
Sbjct: 573 RGRGRPRSRSTMSITEDSEPSTSS 596


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,413,280
Number of Sequences: 27780
Number of extensions: 300972
Number of successful extensions: 934
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 933
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)