Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30365
         (731 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D5737F Cluster: PREDICTED: similar to CG5819-PA,...    53   8e-06
UniRef50_Q16N44 Cluster: Leucine-rich transmembrane protein; n=2...    38   0.25 
UniRef50_UPI00015B5618 Cluster: PREDICTED: similar to ENSANGP000...    36   1.4  
UniRef50_Q0D643 Cluster: Os07g0512100 protein; n=4; Oryza sativa...    33   7.2  
UniRef50_Q31DZ8 Cluster: (NiFe) hydrogenase maturation protein H...    33   9.5  
UniRef50_Q21641 Cluster: Putative uncharacterized protein R02E12...    33   9.5  

>UniRef50_UPI0000D5737F Cluster: PREDICTED: similar to CG5819-PA,
           isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
           similar to CG5819-PA, isoform A - Tribolium castaneum
          Length = 669

 Score = 52.8 bits (121), Expect = 8e-06
 Identities = 30/98 (30%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
 Frame = -2

Query: 724 ADTLIWFIVVMIIGLSLCILLVSGIRSSM---KRRLXXXXXXXXXXXXXXXXRLRQMRIR 554
           +D++ W+   +II + + + ++  +R      ++RL                R+ +M+  
Sbjct: 508 SDSVWWYTTGLIITVFVILFVILAMRRMYLLKEKRLREANEARRNEEREALRRMHRMQAE 567

Query: 553 AEQEALCNTPDPRDLIAPPSYDEALSMPKLNVSCHSLN 440
           A +EA  N PDPR+L  PPSY+EAL +P+L+ S  SL+
Sbjct: 568 AREEASRNAPDPRELQTPPSYNEALLLPRLDSSHPSLS 605


>UniRef50_Q16N44 Cluster: Leucine-rich transmembrane protein; n=2;
           Culicidae|Rep: Leucine-rich transmembrane protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 930

 Score = 37.9 bits (84), Expect = 0.25
 Identities = 20/46 (43%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
 Frame = -2

Query: 571 RQMRIRAEQEALCNTPDPRDLIAPPSYDEALSMPKLN-VSCHSLNE 437
           R+ ++R  QEA  N PD R+   PP Y++A+ +PKL+  S  SL+E
Sbjct: 589 RENQLRLRQEAQLNAPDARE-SRPPCYEDAILLPKLDAASFASLDE 633


>UniRef50_UPI00015B5618 Cluster: PREDICTED: similar to
           ENSANGP00000011337; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to ENSANGP00000011337 - Nasonia
           vitripennis
          Length = 773

 Score = 35.5 bits (78), Expect = 1.4
 Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
 Frame = -2

Query: 562 RIRAEQEALCNTP--DPRDLIAPPSYDEALSMPKLNVSCHSLN 440
           R++ E   + + P   P +LI PPSY+EA++MP+L  S  +L+
Sbjct: 582 RLQEELREVASEPRIHPMELIGPPSYEEAVTMPRLARSLDALD 624


>UniRef50_Q0D643 Cluster: Os07g0512100 protein; n=4; Oryza
           sativa|Rep: Os07g0512100 protein - Oryza sativa subsp.
           japonica (Rice)
          Length = 621

 Score = 33.1 bits (72), Expect = 7.2
 Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 5/85 (5%)
 Frame = +1

Query: 121 VDF*GEGVVLTALE--LPQ*HYHRFQQYIQTFADAEHLVIDPTQLFRDCHTFYFF---YD 285
           VDF  E  V+  L    P   Y  +++  +  AD      D  ++ R  H+F FF    D
Sbjct: 175 VDFHFESSVVPLLSRAAPSDTYRIWKRGAELRADTTLAGFDGLRIRRADHSFLFFGEEAD 234

Query: 286 ASAVYLPLGSRLVLNHHKRVHHRSY 360
           A   +LP GS LVL+  KR  H ++
Sbjct: 235 AGGRHLPPGSLLVLHRGKREVHDAF 259


>UniRef50_Q31DZ8 Cluster: (NiFe) hydrogenase maturation protein
           HypF; n=1; Thiomicrospira crunogena XCL-2|Rep: (NiFe)
           hydrogenase maturation protein HypF - Thiomicrospira
           crunogena (strain XCL-2)
          Length = 775

 Score = 32.7 bits (71), Expect = 9.5
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = +1

Query: 178 YHRFQQYIQTFADAEHLVIDPTQLFRDCHTFYFFYDASAVY 300
           +HRFQQ  Q F    HL   P Q+  D H+ Y  +  +A Y
Sbjct: 456 FHRFQQTFQNFTTLHHLT--PNQVVSDLHSGYASHQWAADY 494


>UniRef50_Q21641 Cluster: Putative uncharacterized protein R02E12.4;
           n=2; Caenorhabditis|Rep: Putative uncharacterized
           protein R02E12.4 - Caenorhabditis elegans
          Length = 639

 Score = 32.7 bits (71), Expect = 9.5
 Identities = 16/61 (26%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
 Frame = +3

Query: 546 CSARILICLNLSLASSTCLSRSACMAARRRFIELRIPLTNNI----HKDKPMIMTTINHI 713
           C  R+ +CL+++  SS C    +C+A RR+ +++    ++ +    HK+K ++  T+  +
Sbjct: 309 CYRRLQLCLDITGRSSRC--NESCLAVRRKKVQVGDHTSDRVDMELHKEKELMTDTMKQM 366

Query: 714 K 716
           K
Sbjct: 367 K 367


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 618,223,532
Number of Sequences: 1657284
Number of extensions: 10783683
Number of successful extensions: 28393
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 27553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28384
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59265488880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)