Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30365
         (731 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF070418-1|AAC23685.1|  517|Homo sapiens embryonic ectoderm deve...    25   9.3  

>AF070418-1|AAC23685.1|  517|Homo sapiens embryonic ectoderm
           development protein protein.
          Length = 517

 Score = 25.4 bits (53), Expect(2) = 9.3
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -2

Query: 190 ENDDSVIVEVQAQLERPLRPRN 125
           ENDD+V +E     ERP  P N
Sbjct: 113 ENDDAVSIESGTNTERPDTPTN 134



 Score = 23.0 bits (47), Expect(2) = 9.3
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = -2

Query: 235 QSPGARRRRMSE 200
           Q PG RRR MSE
Sbjct: 68  QEPGGRRRNMSE 79


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,773,176
Number of Sequences: 237096
Number of extensions: 1625916
Number of successful extensions: 7009
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 6908
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7009
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8679165170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)