Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30365
         (731 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U53337-2|AAA96184.1|  639|Caenorhabditis elegans Hypothetical pr...    33   0.28 
AF016687-7|AAK72063.1|  881|Caenorhabditis elegans Hypothetical ...    31   1.1  
AL033510-7|CAA22069.1|  124|Caenorhabditis elegans Hypothetical ...    29   2.6  
Z82059-3|CAB04872.2|  201|Caenorhabditis elegans Hypothetical pr...    28   5.9  
L29439-1|AAA98751.1|  658|Caenorhabditis elegans endoprotease pr...    28   5.9  
L29438-1|AAA98750.1|  684|Caenorhabditis elegans endoprotease pr...    28   5.9  
AF039719-6|AAO12410.1|  666|Caenorhabditis elegans Blistered cut...    28   5.9  
AF039719-5|AAB96755.1|  699|Caenorhabditis elegans Blistered cut...    28   5.9  
AF039719-4|AAB96753.1|  670|Caenorhabditis elegans Blistered cut...    28   5.9  
AF039719-3|AAB96756.1|  730|Caenorhabditis elegans Blistered cut...    28   5.9  
AF039719-2|AAB96757.1|  827|Caenorhabditis elegans Blistered cut...    28   5.9  
AF039719-1|AAB96754.1|  942|Caenorhabditis elegans Blistered cut...    28   5.9  

>U53337-2|AAA96184.1|  639|Caenorhabditis elegans Hypothetical
           protein R02E12.4 protein.
          Length = 639

 Score = 32.7 bits (71), Expect = 0.28
 Identities = 16/61 (26%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
 Frame = +3

Query: 546 CSARILICLNLSLASSTCLSRSACMAARRRFIELRIPLTNNI----HKDKPMIMTTINHI 713
           C  R+ +CL+++  SS C    +C+A RR+ +++    ++ +    HK+K ++  T+  +
Sbjct: 309 CYRRLQLCLDITGRSSRC--NESCLAVRRKKVQVGDHTSDRVDMELHKEKELMTDTMKQM 366

Query: 714 K 716
           K
Sbjct: 367 K 367


>AF016687-7|AAK72063.1|  881|Caenorhabditis elegans Hypothetical
           protein T21D12.9a protein.
          Length = 881

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = +3

Query: 507 IKSRGSGVLHNASCSARILICLNLSLASSTCLSRSAC 617
           IKS G+G+   ASCSA  L+ L +  +   C+++ +C
Sbjct: 832 IKSTGNGIYLMASCSAFGLMILGVITSICICIAKCSC 868


>AL033510-7|CAA22069.1|  124|Caenorhabditis elegans Hypothetical
           protein Y40H7A.11 protein.
          Length = 124

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -2

Query: 532 NTPDPRDLIAPPSYDEALSMPKLN 461
           N+ +P+   APP Y+ A+ MPK+N
Sbjct: 2   NSENPQIYSAPPPYEVAIGMPKVN 25


>Z82059-3|CAB04872.2|  201|Caenorhabditis elegans Hypothetical
           protein T27E9.6 protein.
          Length = 201

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = -2

Query: 187 NDDSVIVEVQAQLERPLRPRNRRYSIDDND 98
           +DDS  ++ + + E   +PR RR+S DDND
Sbjct: 163 HDDSDDLQAEDEDEDLRQPRRRRHSPDDND 192


>L29439-1|AAA98751.1|  658|Caenorhabditis elegans endoprotease
           protein.
          Length = 658

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 19/53 (35%), Positives = 24/53 (45%)
 Frame = -2

Query: 241 LDQSPGARRRRMSEYIVENDDSVIVEVQAQLERPLRPRNRRYSIDDNDVRESD 83
           L  S   R RR    IVE  DS       + +RP +   R Y + DNDV  S+
Sbjct: 77  LYHSETTRTRRHKRAIVERLDSHPAVEWVEEQRPKKRVKRDYILLDNDVHHSN 129


>L29438-1|AAA98750.1|  684|Caenorhabditis elegans endoprotease
           protein.
          Length = 684

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 19/53 (35%), Positives = 24/53 (45%)
 Frame = -2

Query: 241 LDQSPGARRRRMSEYIVENDDSVIVEVQAQLERPLRPRNRRYSIDDNDVRESD 83
           L  S   R RR    IVE  DS       + +RP +   R Y + DNDV  S+
Sbjct: 77  LYHSETTRTRRHKRAIVERLDSHPAVEWVEEQRPKKRVKRDYILLDNDVHHSN 129


>AF039719-6|AAO12410.1|  666|Caenorhabditis elegans Blistered
           cuticle protein 4, isoformf protein.
          Length = 666

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 19/53 (35%), Positives = 24/53 (45%)
 Frame = -2

Query: 241 LDQSPGARRRRMSEYIVENDDSVIVEVQAQLERPLRPRNRRYSIDDNDVRESD 83
           L  S   R RR    IVE  DS       + +RP +   R Y + DNDV  S+
Sbjct: 77  LYHSETTRTRRHKRAIVERLDSHPAVEWVEEQRPKKRVKRDYILLDNDVHHSN 129


>AF039719-5|AAB96755.1|  699|Caenorhabditis elegans Blistered
           cuticle protein 4, isoforme protein.
          Length = 699

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 19/53 (35%), Positives = 24/53 (45%)
 Frame = -2

Query: 241 LDQSPGARRRRMSEYIVENDDSVIVEVQAQLERPLRPRNRRYSIDDNDVRESD 83
           L  S   R RR    IVE  DS       + +RP +   R Y + DNDV  S+
Sbjct: 77  LYHSETTRTRRHKRAIVERLDSHPAVEWVEEQRPKKRVKRDYILLDNDVHHSN 129


>AF039719-4|AAB96753.1|  670|Caenorhabditis elegans Blistered
           cuticle protein 4, isoforma protein.
          Length = 670

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 19/53 (35%), Positives = 24/53 (45%)
 Frame = -2

Query: 241 LDQSPGARRRRMSEYIVENDDSVIVEVQAQLERPLRPRNRRYSIDDNDVRESD 83
           L  S   R RR    IVE  DS       + +RP +   R Y + DNDV  S+
Sbjct: 77  LYHSETTRTRRHKRAIVERLDSHPAVEWVEEQRPKKRVKRDYILLDNDVHHSN 129


>AF039719-3|AAB96756.1|  730|Caenorhabditis elegans Blistered
           cuticle protein 4, isoformb protein.
          Length = 730

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 19/53 (35%), Positives = 24/53 (45%)
 Frame = -2

Query: 241 LDQSPGARRRRMSEYIVENDDSVIVEVQAQLERPLRPRNRRYSIDDNDVRESD 83
           L  S   R RR    IVE  DS       + +RP +   R Y + DNDV  S+
Sbjct: 77  LYHSETTRTRRHKRAIVERLDSHPAVEWVEEQRPKKRVKRDYILLDNDVHHSN 129


>AF039719-2|AAB96757.1|  827|Caenorhabditis elegans Blistered
           cuticle protein 4, isoformc protein.
          Length = 827

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 19/53 (35%), Positives = 24/53 (45%)
 Frame = -2

Query: 241 LDQSPGARRRRMSEYIVENDDSVIVEVQAQLERPLRPRNRRYSIDDNDVRESD 83
           L  S   R RR    IVE  DS       + +RP +   R Y + DNDV  S+
Sbjct: 77  LYHSETTRTRRHKRAIVERLDSHPAVEWVEEQRPKKRVKRDYILLDNDVHHSN 129


>AF039719-1|AAB96754.1|  942|Caenorhabditis elegans Blistered
           cuticle protein 4, isoformd protein.
          Length = 942

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 19/53 (35%), Positives = 24/53 (45%)
 Frame = -2

Query: 241 LDQSPGARRRRMSEYIVENDDSVIVEVQAQLERPLRPRNRRYSIDDNDVRESD 83
           L  S   R RR    IVE  DS       + +RP +   R Y + DNDV  S+
Sbjct: 77  LYHSETTRTRRHKRAIVERLDSHPAVEWVEEQRPKKRVKRDYILLDNDVHHSN 129


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,439,902
Number of Sequences: 27780
Number of extensions: 263434
Number of successful extensions: 769
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 769
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)