Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30364
         (323 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   4.3  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    20   5.6  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    20   5.6  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    20   7.5  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    20   7.5  

>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 20.6 bits (41), Expect = 4.3
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = -2

Query: 211 NDPYRPVPCPP 179
           NDP R  PC P
Sbjct: 155 NDPNRAPPCDP 165


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 20.2 bits (40), Expect = 5.6
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -2

Query: 193 VPCPPNLMF 167
           +PCP NL+F
Sbjct: 945 MPCPSNLVF 953


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 20.2 bits (40), Expect = 5.6
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = -2

Query: 223 SPLFNDPYRPVPCPP 179
           SPL   P+ P   PP
Sbjct: 16  SPLLTPPHNPAYSPP 30


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 19.8 bits (39), Expect = 7.5
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +3

Query: 132 ASPMARRLAEIKNIRLGGQGTGLYGSLKSGD 224
           AS  ARR     ++ LG  G     S+ SG+
Sbjct: 134 ASDAARRGVLYSSVFLGSPGDASNASIGSGE 164


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 19.8 bits (39), Expect = 7.5
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +3

Query: 132 ASPMARRLAEIKNIRLGGQGTGLYGSLKSGD 224
           AS  ARR     ++ LG  G     S+ SG+
Sbjct: 290 ASDAARRGVLYSSVFLGSPGDASNASIGSGE 320


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,197
Number of Sequences: 336
Number of extensions: 389
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6155018
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)