Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30364
         (323 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y00978-1|CAA68787.1|  615|Homo sapiens PDC-E2 precursor (AA -54 ...    29   3.2  
X13822-1|CAA32052.1|  220|Homo sapiens dihydrolipoamide S-acetyl...    29   3.2  
BC039084-1|AAH39084.1|  647|Homo sapiens dihydrolipoamide S-acet...    29   3.2  
AK223596-1|BAD97316.1|  647|Homo sapiens dihydrolipoamide S-acet...    29   3.2  
J03866-1|AAA62253.1|  613|Homo sapiens dihydrolipoamide acetyltr...    27   9.8  

>Y00978-1|CAA68787.1|  615|Homo sapiens PDC-E2 precursor (AA -54 to
           561) protein.
          Length = 615

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +3

Query: 120 GRVYASPMARRLAEIKNIRLGG-QGTGLYGSLKSGDL 227
           GRV+ SP+A++LA  K I L   +GTG  G +   D+
Sbjct: 321 GRVFVSPLAKKLAVEKGIDLTQVKGTGPDGRITKKDI 357


>X13822-1|CAA32052.1|  220|Homo sapiens dihydrolipoamide
           S-acetyltransferase protein.
          Length = 220

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +3

Query: 120 GRVYASPMARRLAEIKNIRLGG-QGTGLYGSLKSGDL 227
           GRV+ SP+A++LA  K I L   +GTG  G +   D+
Sbjct: 17  GRVFVSPLAKKLAVEKGIDLTQVKGTGPDGRITKKDI 53


>BC039084-1|AAH39084.1|  647|Homo sapiens dihydrolipoamide
           S-acetyltransferase (E2 component of pyruvate
           dehydrogenase co protein.
          Length = 647

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +3

Query: 120 GRVYASPMARRLAEIKNIRLGG-QGTGLYGSLKSGDL 227
           GRV+ SP+A++LA  K I L   +GTG  G +   D+
Sbjct: 353 GRVFVSPLAKKLAVEKGIDLTQVKGTGPDGRITKKDI 389


>AK223596-1|BAD97316.1|  647|Homo sapiens dihydrolipoamide
           S-acetyltransferase (E2 component of pyruvate
           dehydrogenase co protein.
          Length = 647

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +3

Query: 120 GRVYASPMARRLAEIKNIRLGG-QGTGLYGSLKSGDL 227
           GRV+ SP+A++LA  K I L   +GTG  G +   D+
Sbjct: 353 GRVFVSPLAKKLAVEKGIDLTQVKGTGPDGRITKKDI 389


>J03866-1|AAA62253.1|  613|Homo sapiens dihydrolipoamide
           acetyltransferase protein.
          Length = 613

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = +3

Query: 120 GRVYASPMARRLAEIKNIRLGG-QGTGLYGSLKSGDL 227
           GRV+  P+A++LA  K I L   +GTG  G +   D+
Sbjct: 320 GRVFVDPLAKKLAVEKGIDLTQVKGTGPDGRITKKDI 356


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,171,567
Number of Sequences: 237096
Number of extensions: 293194
Number of successful extensions: 509
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 509
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1627597384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)