Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30363
(673 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_20443| Best HMM Match : Sugar_tr (HMM E-Value=3.5) 42 5e-04
SB_53613| Best HMM Match : Sugar_tr (HMM E-Value=0.00012) 35 0.069
SB_51144| Best HMM Match : Sugar_tr (HMM E-Value=0.13) 35 0.069
SB_29945| Best HMM Match : DUF125 (HMM E-Value=1.7) 33 0.21
SB_2499| Best HMM Match : Sugar_tr (HMM E-Value=1e-28) 33 0.21
SB_58306| Best HMM Match : Sugar_tr (HMM E-Value=2.6e-05) 32 0.37
SB_4525| Best HMM Match : Sugar_tr (HMM E-Value=0.028) 31 0.64
SB_31109| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.073) 31 0.84
SB_1462| Best HMM Match : MFS_1 (HMM E-Value=0.042) 31 0.84
SB_18704| Best HMM Match : MFS_1 (HMM E-Value=0.034) 31 0.84
SB_35860| Best HMM Match : Sugar_tr (HMM E-Value=1e-04) 31 1.1
SB_16011| Best HMM Match : Sugar_tr (HMM E-Value=0) 30 1.5
SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35) 30 2.0
SB_31704| Best HMM Match : MFS_1 (HMM E-Value=0.024) 30 2.0
SB_40645| Best HMM Match : zf-C2H2 (HMM E-Value=3.30006e-42) 29 3.4
SB_14086| Best HMM Match : POR (HMM E-Value=7.7) 29 3.4
SB_12353| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_55040| Best HMM Match : TatC (HMM E-Value=0.59) 29 3.4
SB_30134| Best HMM Match : Lectin_C (HMM E-Value=5.4e-05) 29 4.5
SB_35310| Best HMM Match : Cadherin (HMM E-Value=5.9e-23) 29 4.5
SB_52873| Best HMM Match : Oleosin (HMM E-Value=3) 28 6.0
SB_58285| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_32414| Best HMM Match : Osteopontin (HMM E-Value=2.4) 28 7.9
SB_15303| Best HMM Match : Orexin_rec2 (HMM E-Value=6) 28 7.9
SB_12953| Best HMM Match : Defensin_2 (HMM E-Value=3.6) 28 7.9
>SB_20443| Best HMM Match : Sugar_tr (HMM E-Value=3.5)
Length = 563
Score = 41.9 bits (94), Expect = 5e-04
Identities = 25/103 (24%), Positives = 51/103 (49%), Gaps = 1/103 (0%)
Frame = +1
Query: 346 DPEKGSNSEKADFERAIELTGYGRFHYMLLAVCGLVSTSEEMDVISMSFILPSAQCDLDL 525
D EK E AI+ GYG F LL + G ++ M++ ++ + P+ +C+ +L
Sbjct: 40 DQEKEDKELTYTVEDAIDRLGYGLFQIKLLLMIGFAWMADSMEITILAIMCPAIRCEWNL 99
Query: 526 TTQTKGWLNSII-FIGMMVGAYAWGSVADSLGRKRVLIAISIV 651
+T W ++I + +++ + G+V ++ + L +S V
Sbjct: 100 ST----WAEALITTVTLLMRCHTHGAVTRTVTLLKALSHVSAV 138
>SB_53613| Best HMM Match : Sugar_tr (HMM E-Value=0.00012)
Length = 466
Score = 34.7 bits (76), Expect = 0.069
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +1
Query: 547 LNSIIFIGMMVGAYAWGSVADSLGRKRVLIAISIVNALAIVA 672
L S+ FIGM+ G++ G V+D+ GRK L + + A VA
Sbjct: 113 LQSVYFIGMLFGSFLTGMVSDAWGRKNCLFLFTGIMLAAGVA 154
>SB_51144| Best HMM Match : Sugar_tr (HMM E-Value=0.13)
Length = 371
Score = 34.7 bits (76), Expect = 0.069
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 508 QCDLDLTTQTKGWL-NSIIFIGMMVGAYAWGSVADSLGRKRVL 633
Q DL WL NS++F G +GA G +AD GR+ VL
Sbjct: 108 QFDLVCDNSFHAWLANSMLFFGWALGAIILGMIADKYGRRSVL 150
>SB_29945| Best HMM Match : DUF125 (HMM E-Value=1.7)
Length = 608
Score = 33.1 bits (72), Expect = 0.21
Identities = 14/57 (24%), Positives = 27/57 (47%)
Frame = +1
Query: 358 GSNSEKADFERAIELTGYGRFHYMLLAVCGLVSTSEEMDVISMSFILPSAQCDLDLT 528
G S A+E GYG + L + ++ M++ +S ++P +C+ DL+
Sbjct: 79 GKTSPTFTVSDAVESAGYGWYQLRLGIISSFQRVADAMEITMLSILVPYVKCEWDLS 135
>SB_2499| Best HMM Match : Sugar_tr (HMM E-Value=1e-28)
Length = 456
Score = 33.1 bits (72), Expect = 0.21
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +1
Query: 514 DLDLTTQTKGWLNSIIFIGMMVGAYAWGSVADSLGRKRVLIAISI 648
DL L W S++ IG M+G G + D +GRK LI S+
Sbjct: 75 DLYLNADEITWFGSLLNIGAMLGGPIQGFLIDLIGRKFALILTSV 119
>SB_58306| Best HMM Match : Sugar_tr (HMM E-Value=2.6e-05)
Length = 457
Score = 32.3 bits (70), Expect = 0.37
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +1
Query: 547 LNSIIFIGMMVGAYAWGSVADSLGRKRVL 633
L S F+GM++G+ G ++D+ GRK+ L
Sbjct: 79 LQSCFFVGMLIGSLVCGVISDAWGRKKCL 107
>SB_4525| Best HMM Match : Sugar_tr (HMM E-Value=0.028)
Length = 630
Score = 31.5 bits (68), Expect = 0.64
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 547 LNSIIFIGMMVGAYAWGSVADSLGRKRVLIA 639
L ++ F GMM+G+ G +AD+ GRK + A
Sbjct: 303 LQAVFFAGMMIGSVISGMMADAWGRKPCIFA 333
>SB_31109| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.073)
Length = 582
Score = 31.1 bits (67), Expect = 0.84
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +1
Query: 544 WL-NSIIFIGMMVGAYAWGSVADSLGRKRVLIAISIV 651
W+ NS++F G +GA G +AD GR VL +I+
Sbjct: 409 WMANSMLFFGWAIGAIFLGIIADKYGRCSVLFPSAIL 445
>SB_1462| Best HMM Match : MFS_1 (HMM E-Value=0.042)
Length = 277
Score = 31.1 bits (67), Expect = 0.84
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +1
Query: 547 LNSIIFIGMMVGAYAWGSVADSLGRKRVLIAISIVNALAIV 669
+ S+ F+G + G++ G+V+D+ GRK L + A A +
Sbjct: 148 VQSMYFVGYLFGSFLSGTVSDAFGRKITLTVSVALQAAAFI 188
>SB_18704| Best HMM Match : MFS_1 (HMM E-Value=0.034)
Length = 363
Score = 31.1 bits (67), Expect = 0.84
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +1
Query: 547 LNSIIFIGMMVGAYAWGSVADSLGRKRVLIAISIVNALAIV 669
+ S+ F+G + G++ G+V+D+ GRK L + A A +
Sbjct: 151 VQSMYFVGYLFGSFLSGTVSDAFGRKITLTVSVALQAAAFI 191
>SB_35860| Best HMM Match : Sugar_tr (HMM E-Value=1e-04)
Length = 544
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +1
Query: 514 DLDLTTQTKGWL-NSIIFIGMMVGAYAWGSVADSLGRKRVLIAIS 645
DL + W NSI+F G + G +G ++D GR++VL S
Sbjct: 84 DLVCEYSSLSWATNSIMFTGWLFGNIVFGILSDKYGRRKVLFISS 128
>SB_16011| Best HMM Match : Sugar_tr (HMM E-Value=0)
Length = 512
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/52 (23%), Positives = 28/52 (53%)
Frame = +1
Query: 493 ILPSAQCDLDLTTQTKGWLNSIIFIGMMVGAYAWGSVADSLGRKRVLIAISI 648
++ ++ + LT W +S++ +G ++GA G + GRK ++A ++
Sbjct: 72 LIAESKESVKLTVSQGSWFSSLVTLGAILGAPLGGWTLEYFGRKGTIMACAV 123
>SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35)
Length = 1118
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/38 (36%), Positives = 26/38 (68%)
Frame = +1
Query: 553 SIIFIGMMVGAYAWGSVADSLGRKRVLIAISIVNALAI 666
+I F+GM VG+ G ++D++GRK I++ + +AL +
Sbjct: 388 AIFFVGMTVGSVLSGMLSDAIGRK---ISLGLNSALMV 422
>SB_31704| Best HMM Match : MFS_1 (HMM E-Value=0.024)
Length = 625
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +1
Query: 547 LNSIIFIGMMVGAYAWGSVADSLGRK 624
+ S+ F GM+VG++ G V+D GRK
Sbjct: 91 VQSMFFAGMLVGSFVSGPVSDIYGRK 116
>SB_40645| Best HMM Match : zf-C2H2 (HMM E-Value=3.30006e-42)
Length = 554
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +1
Query: 256 CDVKGDLQLNGPGSKTAELGVVPSVKKSKSDPEKGSNSEKAD 381
CD K L NGP E G + S PE+ N +KAD
Sbjct: 300 CDKKALLLRNGPVMTREEGGKSVESHRKGSSPERVENEDKAD 341
>SB_14086| Best HMM Match : POR (HMM E-Value=7.7)
Length = 292
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 568 GMMVGAYAWGSVADSLGRKRVLIAISIVNA 657
G +GAYAW + A S+G V A+ I+ A
Sbjct: 92 GSCLGAYAWSNAAQSIGLPVVCDAVFILEA 121
>SB_12353| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 547 LNSIIFIGMMVGAYAWGSVADSLGRKRVLI 636
L S F GM+VG+ G +D+ GRK L+
Sbjct: 114 LQSCFFAGMLVGSLISGVASDTWGRKECLL 143
>SB_55040| Best HMM Match : TatC (HMM E-Value=0.59)
Length = 275
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 547 LNSIIFIGMMVGAYAWGSVADSLGRKR 627
L S F GM++G+ G ++D+ GRK+
Sbjct: 114 LQSCFFAGMLIGSLVSGLISDAWGRKK 140
>SB_30134| Best HMM Match : Lectin_C (HMM E-Value=5.4e-05)
Length = 131
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +2
Query: 404 PDMAASTTCCWQYAVSSALPRRWTSSRCRSSY 499
PD + C + +S L RRW C +SY
Sbjct: 89 PDNSGGHENCGHFLLSGKLARRWNDISCNNSY 120
>SB_35310| Best HMM Match : Cadherin (HMM E-Value=5.9e-23)
Length = 1250
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +1
Query: 226 TDPGPKNPHNCDVKGDLQLNGPGSKTAELGVVPSVK 333
TDP HNC + Q G T E G V VK
Sbjct: 546 TDPDKTQTHNCSLVNSAQSTGSSYFTVENGTVLEVK 581
>SB_52873| Best HMM Match : Oleosin (HMM E-Value=3)
Length = 152
Score = 28.3 bits (60), Expect = 6.0
Identities = 9/47 (19%), Positives = 26/47 (55%)
Frame = +1
Query: 451 VSTSEEMDVISMSFILPSAQCDLDLTTQTKGWLNSIIFIGMMVGAYA 591
+ ++ M++ +S ++P +C+ DL+ + +++ + + AYA
Sbjct: 21 MQVADAMEITMLSILVPYVKCEWDLSIVQVAMITTMLIVSSVAVAYA 67
>SB_58285| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 547
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/49 (34%), Positives = 30/49 (61%), Gaps = 7/49 (14%)
Frame = +1
Query: 538 KGWLNSIIFIGMMVGAYAWGSVADSLGRKRV-------LIAISIVNALA 663
+G +S+IF G ++GA G ++D GR+ V L+A ++V+AL+
Sbjct: 106 QGVSSSVIFAGWLLGAIFIGWLSDRTGRRYVVYFGSLGLLAAAVVSALS 154
>SB_32414| Best HMM Match : Osteopontin (HMM E-Value=2.4)
Length = 777
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 34 FTSPHPHRS*PPEVAERSQTTRKKHIGSS 120
+T P P PP V RSQ R K + S+
Sbjct: 408 YTKPEPKGRRPPRVGRRSQRHRSKSLNST 436
>SB_15303| Best HMM Match : Orexin_rec2 (HMM E-Value=6)
Length = 421
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +3
Query: 411 WPLPLHAVGSMRSRQHFRGDGRHLDV 488
W L + + + R HF G G H+DV
Sbjct: 185 WNLSIEKLRDFKKRAHFLGRGNHVDV 210
>SB_12953| Best HMM Match : Defensin_2 (HMM E-Value=3.6)
Length = 433
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +1
Query: 193 YKAARPHRMVETDPGPKNPHNCDVKGDLQLNGPGSKTAELGVVPSVKKSKSDPE 354
+K ++ + + P +P D K L L GS + LGVVP V + PE
Sbjct: 335 FKRGTSYQKTKKENQP-SPMTRDFKEHLTLTNTGSGSISLGVVPEVLIPEVSPE 387
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,836,271
Number of Sequences: 59808
Number of extensions: 517792
Number of successful extensions: 1496
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1302
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1490
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1721264831
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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