Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30363
(673 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z22175-2|CAA80131.2| 520|Caenorhabditis elegans Hypothetical pr... 61 6e-10
Z11115-20|CAA77460.2| 520|Caenorhabditis elegans Hypothetical p... 61 6e-10
Z47810-7|CAH10843.1| 538|Caenorhabditis elegans Hypothetical pr... 38 0.005
Z47810-6|CAB76718.1| 504|Caenorhabditis elegans Hypothetical pr... 38 0.005
AL031264-3|CAH04705.1| 538|Caenorhabditis elegans Hypothetical ... 38 0.005
AL031264-2|CAB76735.1| 504|Caenorhabditis elegans Hypothetical ... 38 0.005
Z69788-8|CAA93644.3| 483|Caenorhabditis elegans Hypothetical pr... 36 0.020
U12965-9|AAA20605.3| 522|Caenorhabditis elegans Hypothetical pr... 36 0.035
U12965-7|AAY86205.1| 528|Caenorhabditis elegans Hypothetical pr... 34 0.11
U80931-7|AAB38003.2| 526|Caenorhabditis elegans Organic anion t... 33 0.24
AF152095-1|AAF73198.1| 526|Caenorhabditis elegans multispecific... 33 0.24
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 32 0.32
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 32 0.32
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 32 0.32
Z69787-2|CAA93635.2| 474|Caenorhabditis elegans Hypothetical pr... 30 1.7
AC090999-19|AAK26156.1| 575|Caenorhabditis elegans Hypothetical... 30 1.7
Z68219-5|CAJ43449.1| 343|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z68219-4|CAA92482.2| 359|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z99709-5|CAB16860.1| 246|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z83228-10|CAB05732.2| 585|Caenorhabditis elegans Hypothetical p... 29 3.0
Z83228-1|CAC70093.1| 568|Caenorhabditis elegans Hypothetical pr... 29 3.0
AF125960-2|AAD14736.1| 478|Caenorhabditis elegans Hypothetical ... 29 3.0
AF110415-1|AAF21932.1| 568|Caenorhabditis elegans organic catio... 29 3.0
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 29 3.0
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 29 3.0
Z68296-1|CAA92589.2| 520|Caenorhabditis elegans Hypothetical pr... 29 4.0
AY874872-1|AAX62733.1| 1668|Caenorhabditis elegans chitin syntha... 29 4.0
AF026210-2|AAB71283.2| 1668|Caenorhabditis elegans Chitin syntha... 29 4.0
AL132948-43|CAB61061.2| 511|Caenorhabditis elegans Hypothetical... 28 5.3
AF016656-3|AAB66037.2| 515|Caenorhabditis elegans Hypothetical ... 28 5.3
Z68215-1|CAA92450.1| 517|Caenorhabditis elegans Hypothetical pr... 27 9.2
>Z22175-2|CAA80131.2| 520|Caenorhabditis elegans Hypothetical
protein ZK637.1 protein.
Length = 520
Score = 61.3 bits (142), Expect = 6e-10
Identities = 27/101 (26%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Frame = +1
Query: 352 EKGSNSEKA-DFERAIELTGYGRFHYMLLAVCGLVSTSEEMDVISMSFILPSAQCDLDLT 528
++ +SEK + A+E G+GRF L + G+ ++ M+++ +S I P+ C+ ++
Sbjct: 58 QRSPDSEKTFTVDEAVEALGFGRFQLKLSILTGMAWMADAMEMMLLSLISPALACEWGIS 117
Query: 529 TQTKGWLNSIIFIGMMVGAYAWGSVADSLGRKRVLIAISIV 651
+ + + + +F GMM+ + WG + D GR++ L ++V
Sbjct: 118 SVQQALVTTCVFSGMMLSSTFWGKICDRFGRRKGLTFSTLV 158
>Z11115-20|CAA77460.2| 520|Caenorhabditis elegans Hypothetical
protein ZK637.1 protein.
Length = 520
Score = 61.3 bits (142), Expect = 6e-10
Identities = 27/101 (26%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Frame = +1
Query: 352 EKGSNSEKA-DFERAIELTGYGRFHYMLLAVCGLVSTSEEMDVISMSFILPSAQCDLDLT 528
++ +SEK + A+E G+GRF L + G+ ++ M+++ +S I P+ C+ ++
Sbjct: 58 QRSPDSEKTFTVDEAVEALGFGRFQLKLSILTGMAWMADAMEMMLLSLISPALACEWGIS 117
Query: 529 TQTKGWLNSIIFIGMMVGAYAWGSVADSLGRKRVLIAISIV 651
+ + + + +F GMM+ + WG + D GR++ L ++V
Sbjct: 118 SVQQALVTTCVFSGMMLSSTFWGKICDRFGRRKGLTFSTLV 158
>Z47810-7|CAH10843.1| 538|Caenorhabditis elegans Hypothetical
protein F45E10.2b protein.
Length = 538
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/50 (36%), Positives = 32/50 (64%), Gaps = 7/50 (14%)
Frame = +1
Query: 541 GWLNSII----FIGMMVGAYAWGSVADSLGRKRVL---IAISIVNALAIV 669
GW+ + + FIG M+G++ G +AD +GRK+VL + + +V AL ++
Sbjct: 143 GWIRATVQAVYFIGQMIGSFTCGVMADKIGRKKVLFWCLVLQVVCALLLI 192
>Z47810-6|CAB76718.1| 504|Caenorhabditis elegans Hypothetical
protein F45E10.2a protein.
Length = 504
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/50 (36%), Positives = 32/50 (64%), Gaps = 7/50 (14%)
Frame = +1
Query: 541 GWLNSII----FIGMMVGAYAWGSVADSLGRKRVL---IAISIVNALAIV 669
GW+ + + FIG M+G++ G +AD +GRK+VL + + +V AL ++
Sbjct: 109 GWIRATVQAVYFIGQMIGSFTCGVMADKIGRKKVLFWCLVLQVVCALLLI 158
>AL031264-3|CAH04705.1| 538|Caenorhabditis elegans Hypothetical
protein F45E10.2b protein.
Length = 538
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/50 (36%), Positives = 32/50 (64%), Gaps = 7/50 (14%)
Frame = +1
Query: 541 GWLNSII----FIGMMVGAYAWGSVADSLGRKRVL---IAISIVNALAIV 669
GW+ + + FIG M+G++ G +AD +GRK+VL + + +V AL ++
Sbjct: 143 GWIRATVQAVYFIGQMIGSFTCGVMADKIGRKKVLFWCLVLQVVCALLLI 192
>AL031264-2|CAB76735.1| 504|Caenorhabditis elegans Hypothetical
protein F45E10.2a protein.
Length = 504
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/50 (36%), Positives = 32/50 (64%), Gaps = 7/50 (14%)
Frame = +1
Query: 541 GWLNSII----FIGMMVGAYAWGSVADSLGRKRVL---IAISIVNALAIV 669
GW+ + + FIG M+G++ G +AD +GRK+VL + + +V AL ++
Sbjct: 109 GWIRATVQAVYFIGQMIGSFTCGVMADKIGRKKVLFWCLVLQVVCALLLI 158
>Z69788-8|CAA93644.3| 483|Caenorhabditis elegans Hypothetical
protein F09A5.1 protein.
Length = 483
Score = 36.3 bits (80), Expect = 0.020
Identities = 17/86 (19%), Positives = 41/86 (47%)
Frame = +1
Query: 415 RFHYMLLAVCGLVSTSEEMDVISMSFILPSAQCDLDLTTQTKGWLNSIIFIGMMVGAYAW 594
R Y+ + + +V+ +D +++ +LP Q ++ G + ++ I M+G+
Sbjct: 5 RKDYISIVILFVVNLINNVDRYTIAGVLPDVQSYYNINDSMGGMIQTVFLISFMIGSPIC 64
Query: 595 GSVADSLGRKRVLIAISIVNALAIVA 672
G + D RK V++ ++ + + A
Sbjct: 65 GYLGDRFNRKYVMLVGIVIWLICVCA 90
>U12965-9|AAA20605.3| 522|Caenorhabditis elegans Hypothetical
protein F23F12.3 protein.
Length = 522
Score = 35.5 bits (78), Expect = 0.035
Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +1
Query: 544 WLNSIIFIGMMVGAYAWGSVADSLGRKRV-LIAISI 648
W+ +I FIG +VGA +G + D GRK V + ISI
Sbjct: 98 WIATIQFIGALVGALVYGHLGDHFGRKPVSFVGISI 133
>U12965-7|AAY86205.1| 528|Caenorhabditis elegans Hypothetical
protein F23F12.13 protein.
Length = 528
Score = 33.9 bits (74), Expect = 0.11
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 544 WLNSIIFIGMMVGAYAWGSVADSLGRKRV 630
W+ +I FIG+++GA +G + D GRK V
Sbjct: 98 WVATIQFIGVLIGAITYGHLGDHFGRKPV 126
>U80931-7|AAB38003.2| 526|Caenorhabditis elegans Organic anion
transporter protein 1 protein.
Length = 526
Score = 32.7 bits (71), Expect = 0.24
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +1
Query: 568 GMMVGAYAWGSVADSLGRKRVLIAISIVNAL 660
G++VGA +G V+D+ GR++ LI I NA+
Sbjct: 135 GVLVGAAIFGQVSDNFGRRKALIISCIGNAI 165
>AF152095-1|AAF73198.1| 526|Caenorhabditis elegans multispecific
organic anion transporterprotein.
Length = 526
Score = 32.7 bits (71), Expect = 0.24
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +1
Query: 568 GMMVGAYAWGSVADSLGRKRVLIAISIVNAL 660
G++VGA +G V+D+ GR++ LI I NA+
Sbjct: 135 GVLVGAAIFGQVSDNFGRRKALIISCIGNAI 165
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 32.3 bits (70), Expect = 0.32
Identities = 27/93 (29%), Positives = 41/93 (44%)
Frame = -3
Query: 413 PYPVSSIARSKSAFSELEPFSGSDFDFLTEGTTPSSAVLEPGPFSCRSPFTSQL*GFLGP 234
P P SS S S SG+ G+T S+ + PG S + T + P
Sbjct: 118 PVPGSSSTIGSSTPSASSSSSGTMSTI--SGSTGSTVTVVPGSSSTFASSTP-IASSSSP 174
Query: 233 GSVSTILCGRAALYGGRGDTQTSLTGGSGATNS 135
GS T+ G ++ YG + +S + G+ +TNS
Sbjct: 175 GSTVTVAPGSSSTYGSSTPSASSSSSGTMSTNS 207
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 32.3 bits (70), Expect = 0.32
Identities = 27/93 (29%), Positives = 41/93 (44%)
Frame = -3
Query: 413 PYPVSSIARSKSAFSELEPFSGSDFDFLTEGTTPSSAVLEPGPFSCRSPFTSQL*GFLGP 234
P P SS S S SG+ G+T S+ + PG S + T + P
Sbjct: 325 PVPGSSSTIGSSTPSASSSSSGTMSTI--SGSTGSTVTVVPGSSSTFASSTP-IASSSSP 381
Query: 233 GSVSTILCGRAALYGGRGDTQTSLTGGSGATNS 135
GS T+ G ++ YG + +S + G+ +TNS
Sbjct: 382 GSTVTVAPGSSSTYGSSTPSASSSSSGTMSTNS 414
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 32.3 bits (70), Expect = 0.32
Identities = 27/93 (29%), Positives = 41/93 (44%)
Frame = -3
Query: 413 PYPVSSIARSKSAFSELEPFSGSDFDFLTEGTTPSSAVLEPGPFSCRSPFTSQL*GFLGP 234
P P SS S S SG+ G+T S+ + PG S + T + P
Sbjct: 325 PVPGSSSTIGSSTPSASSSSSGTMSTI--SGSTGSTVTVVPGSSSTFASSTP-IASSSSP 381
Query: 233 GSVSTILCGRAALYGGRGDTQTSLTGGSGATNS 135
GS T+ G ++ YG + +S + G+ +TNS
Sbjct: 382 GSTVTVAPGSSSTYGSSTPSASSSSSGTMSTNS 414
>Z69787-2|CAA93635.2| 474|Caenorhabditis elegans Hypothetical
protein C44C10.3 protein.
Length = 474
Score = 29.9 bits (64), Expect = 1.7
Identities = 9/44 (20%), Positives = 29/44 (65%)
Frame = +1
Query: 538 KGWLNSIIFIGMMVGAYAWGSVADSLGRKRVLIAISIVNALAIV 669
+ + + + ++G++VG +G+++D GRK + I + ++ ++++
Sbjct: 85 QSFFSLVQYLGVLVGTVLFGTLSDKYGRKPIGILVIVIAIISLL 128
>AC090999-19|AAK26156.1| 575|Caenorhabditis elegans Hypothetical
protein Y82E9BR.16a protein.
Length = 575
Score = 29.9 bits (64), Expect = 1.7
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = +1
Query: 538 KGWLNSIIFIGMMVGAYAWGSVADSLGRKRVLIAISIV 651
K + + ++G M G+ +G + D +GRK+V ++
Sbjct: 133 KATIQAAYYVGQMAGSTTFGMLGDRIGRKKVFFLAIVI 170
>Z68219-5|CAJ43449.1| 343|Caenorhabditis elegans Hypothetical
protein T05A1.5b protein.
Length = 343
Score = 29.5 bits (63), Expect = 2.3
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 15/80 (18%)
Frame = +1
Query: 469 MDVISMSFILPSAQCDLD----LTTQ-----TKGWL------NSIIFIGMMVGAYAWGSV 603
M +S S++ PS+ C LD +T Q TK + +SI F+G + +
Sbjct: 83 MPTMSPSYMAPSSPCTLDNCSFVTVQNEFNITKTLIDPGEMTSSIFFLGNGILGQIYAVA 142
Query: 604 ADSLGRKRVLIAISIVNALA 663
AD +GR+ VLIA ++ L+
Sbjct: 143 ADRIGRRPVLIASLFISGLS 162
>Z68219-4|CAA92482.2| 359|Caenorhabditis elegans Hypothetical
protein T05A1.5a protein.
Length = 359
Score = 29.5 bits (63), Expect = 2.3
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 15/80 (18%)
Frame = +1
Query: 469 MDVISMSFILPSAQCDLD----LTTQ-----TKGWL------NSIIFIGMMVGAYAWGSV 603
M +S S++ PS+ C LD +T Q TK + +SI F+G + +
Sbjct: 99 MPTMSPSYMAPSSPCTLDNCSFVTVQNEFNITKTLIDPGEMTSSIFFLGNGILGQIYAVA 158
Query: 604 ADSLGRKRVLIAISIVNALA 663
AD +GR+ VLIA ++ L+
Sbjct: 159 ADRIGRRPVLIASLFISGLS 178
>Z99709-5|CAB16860.1| 246|Caenorhabditis elegans Hypothetical
protein C47B2.5 protein.
Length = 246
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = +1
Query: 388 RAIELTGYGRFHYMLLAVCGLVSTSEEMDVISMSFILPSAQCDLDLTTQTKGWL 549
R EL G G +A CGL STS E+ V+ F L ++ Q + L
Sbjct: 188 RGSELIGAGMVVNDWVAFCGLDSTSTELSVVESIFKLGEQGAPTSISNQLRDTL 241
>Z83228-10|CAB05732.2| 585|Caenorhabditis elegans Hypothetical
protein F52F12.1a protein.
Length = 585
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = +1
Query: 487 SFILPSAQCDLDLTTQTKGWLN---SIIFIGMMVGAYAWGSVADSLGRKRVLIAISIV 651
S L S + +L + W+ + ++G +G +G VAD GR+R I V
Sbjct: 134 STYLDSLVTEFNLVCDQQAWIEISTTSFYVGSFIGNCLFGYVADKFGRRRSFFVILTV 191
>Z83228-1|CAC70093.1| 568|Caenorhabditis elegans Hypothetical
protein F52F12.1b protein.
Length = 568
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = +1
Query: 487 SFILPSAQCDLDLTTQTKGWLN---SIIFIGMMVGAYAWGSVADSLGRKRVLIAISIV 651
S L S + +L + W+ + ++G +G +G VAD GR+R I V
Sbjct: 117 STYLDSLVTEFNLVCDQQAWIEISTTSFYVGSFIGNCLFGYVADKFGRRRSFFVILTV 174
>AF125960-2|AAD14736.1| 478|Caenorhabditis elegans Hypothetical
protein T12B3.2 protein.
Length = 478
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/41 (26%), Positives = 27/41 (65%)
Frame = +1
Query: 538 KGWLNSIIFIGMMVGAYAWGSVADSLGRKRVLIAISIVNAL 660
+ + + + ++G+++G +GS++D GR+ + I + I NA+
Sbjct: 85 QSFFSQVQYVGVLIGTLLFGSLSDRFGRRPIGILV-ISNAI 124
>AF110415-1|AAF21932.1| 568|Caenorhabditis elegans organic cation
transporter 1 protein.
Length = 568
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = +1
Query: 487 SFILPSAQCDLDLTTQTKGWLN---SIIFIGMMVGAYAWGSVADSLGRKRVLIAISIV 651
S L S + +L + W+ + ++G +G +G VAD GR+R I V
Sbjct: 117 STYLDSLVTEFNLVCDQQAWIEISTTSFYVGSFIGNCLFGYVADKFGRRRSFFVILTV 174
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +1
Query: 16 STTSVKFTSPHPHRS*PPEVAERSQTTRKKHIGSSPASY 132
+T +K T+ HPHR PP ++ T+ +H G +S+
Sbjct: 688 NTRHLKRTTEHPHRKQPP---QKRDNTKDQHRGGKKSSH 723
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +1
Query: 16 STTSVKFTSPHPHRS*PPEVAERSQTTRKKHIGSSPASY 132
+T +K T+ HPHR PP ++ T+ +H G +S+
Sbjct: 910 NTRHLKRTTEHPHRKQPP---QKRDNTKDQHRGGKKSSH 945
>Z68296-1|CAA92589.2| 520|Caenorhabditis elegans Hypothetical
protein C46C2.2 protein.
Length = 520
Score = 28.7 bits (61), Expect = 4.0
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +1
Query: 562 FIGMMVGAYAWGSVADSLGRKRVLIAISIV 651
++G+++G G VAD +GRK+ I ++
Sbjct: 116 YVGVLIGNIILGYVADQIGRKKTFILSMLI 145
>AY874872-1|AAX62733.1| 1668|Caenorhabditis elegans chitin synthase 2
protein.
Length = 1668
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/42 (28%), Positives = 17/42 (40%)
Frame = -2
Query: 249 RILGPRVSFYHPMRAGGFVWWSRGHSNVSHWGEWRYQQRIAC 124
R LG HP G VW+ + + HW + + I C
Sbjct: 887 RRLGAACGRIHPRGDGAMVWYQKFEYAIGHWLQKATEHMIGC 928
>AF026210-2|AAB71283.2| 1668|Caenorhabditis elegans Chitin synthase
protein 2 protein.
Length = 1668
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/42 (28%), Positives = 17/42 (40%)
Frame = -2
Query: 249 RILGPRVSFYHPMRAGGFVWWSRGHSNVSHWGEWRYQQRIAC 124
R LG HP G VW+ + + HW + + I C
Sbjct: 887 RRLGAACGRIHPRGDGAMVWYQKFEYAIGHWLQKATEHMIGC 928
>AL132948-43|CAB61061.2| 511|Caenorhabditis elegans Hypothetical
protein Y39B6A.41 protein.
Length = 511
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +1
Query: 553 SIIFIGMMVGAYAWGSVADSLGRKRVLIAISIVNALAIVA 672
S +FIG+ + G + D LGRK ++ S + + +A
Sbjct: 65 SFMFIGLAISFAIMGKLMDGLGRKETILLRSFLGIIGSMA 104
>AF016656-3|AAB66037.2| 515|Caenorhabditis elegans Hypothetical
protein C35A11.4 protein.
Length = 515
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 553 SIIFIGMMVGAYAWGSVADSLGRKRVLIAISIVNALA 663
+I+F+G + G+++ +AD +GRK L V LA
Sbjct: 68 AILFLGALAGSFSIRLIADWIGRKNGLYISIAVGVLA 104
>Z68215-1|CAA92450.1| 517|Caenorhabditis elegans Hypothetical
protein C53B4.1 protein.
Length = 517
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +1
Query: 547 LNSIIFIGMMVGAYAWGSVADSLGRKRVLIA 639
L++ FIG ++G A G +AD GR+ + ++
Sbjct: 118 LSTATFIGTLLGNIALGFLADKYGRRTIYLS 148
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,362,507
Number of Sequences: 27780
Number of extensions: 366111
Number of successful extensions: 998
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 997
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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