Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30363
(673 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g13050.1 68416.m01626 transporter-related low similarity to a... 72 4e-13
At2g48020.2 68415.m06011 sugar transporter, putative similar to ... 37 0.014
At2g48020.1 68415.m06010 sugar transporter, putative similar to ... 37 0.014
At1g75220.1 68414.m08738 integral membrane protein, putative str... 36 0.019
At1g19450.1 68414.m02423 integral membrane protein, putative / s... 36 0.025
At1g08930.1 68414.m00994 early-responsive to dehydration stress ... 36 0.025
At5g43340.1 68418.m05298 inorganic phosphate transporter identic... 33 0.17
At1g16390.1 68414.m01960 organic cation transporter-related low ... 33 0.23
At1g54730.2 68414.m06240 sugar transporter, putative similar to ... 31 0.53
At1g79360.1 68414.m09248 transporter-related low similarity to S... 31 0.70
At1g08920.2 68414.m00993 sugar transporter, putative similar to ... 31 0.70
At1g08920.1 68414.m00992 sugar transporter, putative similar to ... 31 0.70
At5g18840.1 68418.m02239 sugar transporter, putative similar to ... 31 0.92
At3g17900.1 68416.m02280 expressed protein 31 0.92
At5g13740.1 68418.m01599 sugar transporter family protein contai... 30 1.6
At2g20780.1 68415.m02442 mannitol transporter, putative similar ... 30 1.6
At3g43590.1 68416.m04638 zinc knuckle (CCHC-type) family protein... 29 2.1
At3g43790.3 68416.m04680 transporter-related low similarity to S... 29 2.8
At3g43790.2 68416.m04679 transporter-related low similarity to S... 29 2.8
At3g43790.1 68416.m04678 transporter-related low similarity to S... 29 2.8
At3g05155.1 68416.m00560 sugar transporter, putative similar to ... 29 2.8
At2g43330.1 68415.m05388 sugar transporter family protein simila... 29 2.8
At1g73220.1 68414.m08474 sugar transporter family protein contai... 29 2.8
At5g13750.1 68418.m01600 transporter-related 29 3.7
At5g41310.1 68418.m05020 kinesin motor protein-related 28 4.9
At4g36670.1 68417.m05203 mannitol transporter, putative similar ... 28 4.9
At4g09670.1 68417.m01588 oxidoreductase family protein similar t... 28 4.9
At4g08878.1 68417.m01463 inorganic phosphate transporter, putati... 28 4.9
At3g02060.1 68416.m00169 DEAD/DEAH box helicase, putative simila... 28 4.9
At1g69690.1 68414.m08020 TCP family transcription factor, putati... 28 4.9
At5g27360.1 68418.m03267 sugar-porter family protein 2 (SFP2) id... 28 6.5
At5g42390.1 68418.m05161 metalloendopeptidase identical to chlor... 27 8.6
At5g25000.1 68418.m02963 hypothetical protein 27 8.6
At3g03090.1 68416.m00305 sugar transporter family protein simila... 27 8.6
At1g04300.1 68414.m00421 meprin and TRAF homology domain-contain... 27 8.6
>At3g13050.1 68416.m01626 transporter-related low similarity to
apical organic cation transporter [Sus scrofa]
GI:2062135, SP|Q02563 Synaptic vesicle protein 2 (SV2)
{Rattus norvegicus}; contains Pfam profile PF00083:
major facilitator superfamily protein
Length = 500
Score = 71.7 bits (168), Expect = 4e-13
Identities = 30/93 (32%), Positives = 59/93 (63%)
Frame = +1
Query: 385 ERAIELTGYGRFHYMLLAVCGLVSTSEEMDVISMSFILPSAQCDLDLTTQTKGWLNSIIF 564
+ A+ G+G+F +LA G+ +E M+++ +SF+ P+ Q +L+ + + + S++F
Sbjct: 11 DEALVAMGFGKFQIYVLAYAGMGWVAEAMEMMLLSFVGPAVQSLWNLSARQESLITSVVF 70
Query: 565 IGMMVGAYAWGSVADSLGRKRVLIAISIVNALA 663
GM++GAY+WG V+D GR++ I ++V +A
Sbjct: 71 AGMLIGAYSWGIVSDKHGRRKGFIITAVVTFVA 103
>At2g48020.2 68415.m06011 sugar transporter, putative similar to
ERD6 protein {Arabidopsis thaliana} GI:3123712,
sugar-porter family proteins 1 and 2 [Arabidopsis
thaliana] GI:14585699, GI:14585701; contains Pfam
profile PF00083: major facilitator superfamily protein
Length = 463
Score = 36.7 bits (81), Expect = 0.014
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +1
Query: 514 DLDLTTQTKGWLNSIIFIGMMVGAYAWGSVADSLGRK---RVLIAISIVNALAIV 669
DL LT S++ G M+GA G +AD +GRK RV A +V LAI+
Sbjct: 59 DLSLTIAEFSLFGSLLTFGAMIGAITSGPIADLVGRKGAMRVSSAFCVVGWLAII 113
>At2g48020.1 68415.m06010 sugar transporter, putative similar to
ERD6 protein {Arabidopsis thaliana} GI:3123712,
sugar-porter family proteins 1 and 2 [Arabidopsis
thaliana] GI:14585699, GI:14585701; contains Pfam
profile PF00083: major facilitator superfamily protein
Length = 463
Score = 36.7 bits (81), Expect = 0.014
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +1
Query: 514 DLDLTTQTKGWLNSIIFIGMMVGAYAWGSVADSLGRK---RVLIAISIVNALAIV 669
DL LT S++ G M+GA G +AD +GRK RV A +V LAI+
Sbjct: 59 DLSLTIAEFSLFGSLLTFGAMIGAITSGPIADLVGRKGAMRVSSAFCVVGWLAII 113
>At1g75220.1 68414.m08738 integral membrane protein, putative strong
similarity to integral membrane protein GI:1209756 from
[Beta vulgaris]; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 487
Score = 36.3 bits (80), Expect = 0.019
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +1
Query: 514 DLDLTTQTKGWLNSIIFIGMMVGAYAWGSVADSLGRKRVLIAISIVNAL 660
DL LT S+ +G MVGA A G +A+ +GRK L+ +I N +
Sbjct: 79 DLGLTVSEYSVFGSLSNVGAMVGAIASGQIAEYIGRKGSLMIAAIPNII 127
>At1g19450.1 68414.m02423 integral membrane protein, putative /
sugar transporter family protein similar to GB:U43629
GI:1209756 integral membrane protein from [Beta
vulgaris]; contains Pfam profile PF00083: major
facilitator superfamily protein; contains TIGRfam
TIGR00879: Sugar transporter
Length = 488
Score = 35.9 bits (79), Expect = 0.025
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +1
Query: 514 DLDLTTQTKGWLNSIIFIGMMVGAYAWGSVADSLGRKRVLIAISIVNAL 660
DL LT S+ +G MVGA A G +A+ +GRK L+ +I N +
Sbjct: 80 DLGLTVSEYSVFGSLSNVGAMVGAIASGQIAEYVGRKGSLMIAAIPNII 128
>At1g08930.1 68414.m00994 early-responsive to dehydration stress
protein (ERD6) / sugar transporter family protein
identical to ERD6 protein {Arabidopsis thaliana}
GI:3123712; contains Pfam profile PF00083: major
facilitator superfamily protein; contains TIGRfam
TIGR00879: Sugar transporter
Length = 496
Score = 35.9 bits (79), Expect = 0.025
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +1
Query: 514 DLDLTTQTKGWLNSIIFIGMMVGAYAWGSVADSLGRKRVLI 636
DL L+ SI+ +G ++GA G VAD LGRKR ++
Sbjct: 89 DLSLSVAEYSMFGSILTLGGLIGAVFSGKVADVLGRKRTML 129
>At5g43340.1 68418.m05298 inorganic phosphate transporter identical
to inorganic phosphate transporter [Arabidopsis
thaliana] GI:3869190
Length = 516
Score = 33.1 bits (72), Expect = 0.17
Identities = 22/100 (22%), Positives = 43/100 (43%), Gaps = 10/100 (10%)
Frame = +1
Query: 361 SNSEKADFERAIELTGYGRFHYMLLAVCGLVSTSEEMDVISMSFI----------LPSAQ 510
+N E+ +A+++ +H + V G+ ++ D+ +S I +P +
Sbjct: 2 ANEEQGSILKALDVAKTQWYHVTAVVVSGMGFFTDSYDLFVISLITKLLGRIYYQVPGSS 61
Query: 511 CDLDLTTQTKGWLNSIIFIGMMVGAYAWGSVADSLGRKRV 630
L ++ + F G +G +G + D LGRKRV
Sbjct: 62 SPGSLPDGISAAVSGVAFAGTFIGQIFFGCLGDKLGRKRV 101
>At1g16390.1 68414.m01960 organic cation transporter-related low
similarity to Organic cation/carnitine transporter 2
(Solute carrier family 22, member 5) (High-affinity
sodium-dependent carnitine cotransporter) from {Homo
sapiens} SP|O76082, {Rattus norvegicus} SP|O70594;
contains Pfam profile PF00083: major facilitator
superfamily protein
Length = 518
Score = 32.7 bits (71), Expect = 0.23
Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = +1
Query: 538 KGWLNSIIFIGMMVGAYAWGSVAD-SLGRKRVLIAISIVNALA 663
KG+ S F+G ++G A ++AD SLGRK +L+ ++ +L+
Sbjct: 121 KGFPASSFFLGCLIGGLALSTLADSSLGRKNMLLLSCLIMSLS 163
>At1g54730.2 68414.m06240 sugar transporter, putative similar to
ERD6 protein [Arabidopsis thaliana] GI:3123712,
sugar-porter family proteins 1 and 2 [Arabidopsis
thaliana] GI:14585699, GI:14585701; contains Pfam
profile PF00083: major facilitator superfamily protein
Length = 470
Score = 31.5 bits (68), Expect = 0.53
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +1
Query: 514 DLDLTTQTKGWLNSIIFIGMMVGAYAWGSVADSLGRKRVL 633
+L+L+ SI+ IG M+GA G +AD +GR+ +
Sbjct: 63 ELNLSVAEYSLFGSILTIGAMIGAAMSGRIADMIGRRATM 102
>At1g79360.1 68414.m09248 transporter-related low similarity to
SP|O76082 Organic cation/carnitine transporter 2 (Solute
carrier family 22, member 5) (High-affinity
sodium-dependent carnitine cotransporter) {Homo
sapiens}; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 527
Score = 31.1 bits (67), Expect = 0.70
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +1
Query: 538 KGWLNSIIFIGMMVGAYAWGSVAD-SLGRKRVLIAISIVNALA 663
KG S F+G ++G ++AD SLGRK +L +V A++
Sbjct: 113 KGLPESSFFVGCLIGGLVLSTLADSSLGRKNMLFLSCLVMAIS 155
>At1g08920.2 68414.m00993 sugar transporter, putative similar to
ERD6 protein {Arabidopsis thaliana} GI:3123712,
sugar-porter family proteins 1 and 2 [Arabidopsis
thaliana] GI:14585699, GI:14585701; contains Pfam
profile PF00083: major facilitator superfamily protein
Length = 477
Score = 31.1 bits (67), Expect = 0.70
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +1
Query: 514 DLDLTTQTKGWLNSIIFIGMMVGAYAWGSVADSLGRK 624
DL L+ SI+ G M+GA G VAD +GRK
Sbjct: 63 DLGLSVAQYSMFGSIMTFGGMIGAIFSGKVADLMGRK 99
>At1g08920.1 68414.m00992 sugar transporter, putative similar to
ERD6 protein {Arabidopsis thaliana} GI:3123712,
sugar-porter family proteins 1 and 2 [Arabidopsis
thaliana] GI:14585699, GI:14585701; contains Pfam
profile PF00083: major facilitator superfamily protein
Length = 470
Score = 31.1 bits (67), Expect = 0.70
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +1
Query: 514 DLDLTTQTKGWLNSIIFIGMMVGAYAWGSVADSLGRK 624
DL L+ SI+ G M+GA G VAD +GRK
Sbjct: 63 DLGLSVAQYSMFGSIMTFGGMIGAIFSGKVADLMGRK 99
>At5g18840.1 68418.m02239 sugar transporter, putative similar to
ERD6 protein {Arabidopsis thaliana} GI:3123712,
sugar-porter family protein 1 [Arabidopsis thaliana]
GI:14585699; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 482
Score = 30.7 bits (66), Expect = 0.92
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +1
Query: 502 SAQCDLDLTTQTKGWLNSIIFIGMMVGAYAWGSVADSLGRK 624
S + DL+L+ SI+ IG M+GA G ++D GRK
Sbjct: 71 SIRQDLNLSLAEFSMFGSILTIGAMLGAVMSGKISDFSGRK 111
>At3g17900.1 68416.m02280 expressed protein
Length = 838
Score = 30.7 bits (66), Expect = 0.92
Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Frame = +3
Query: 84 LTNNKEEAHRIVTGKLYAVGSATPPSERRLSVPATTIQSRPPA---*DGRN*PGAQESSQ 254
LT K E H + ++VGS PS R + ++++ S P G G Q +
Sbjct: 558 LTLRKGEEHSFIVKPAFSVGSNLKPSAARNKLKSSSL-SLPTVNFERKGSGLSGDQYAVM 616
Query: 255 L*CKRGSTTKRPRFQNRRAWRRTFS*EIEI 344
+ C+ T R F+ R WR S ++ I
Sbjct: 617 VSCRCNYTESRLFFKQRTKWRPRVSRDLMI 646
>At5g13740.1 68418.m01599 sugar transporter family protein contains
Pfam profile PF00083: major facilitator superfamily
protein
Length = 486
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Frame = +1
Query: 541 GWLNSIIFIGMMVGAYAWGSVADSLGRKRVL----IAISIVNAL 660
G++ +G + + WG VAD GRK ++ I+I+I NAL
Sbjct: 81 GFVGCSFMLGRALTSVFWGIVADRYGRKPIILLGTISIAIFNAL 124
>At2g20780.1 68415.m02442 mannitol transporter, putative similar to
mannitol transporter [Apium graveolens var. dulce]
GI:12004316; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 526
Score = 29.9 bits (64), Expect = 1.6
Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 3/126 (2%)
Frame = +1
Query: 283 NGPGSKTAELGVVPSVKKSKSDPEKGSNSEKADFERAIELTGYGRFHYMLLAV--CGLVS 456
NG GS + V KK+K S++E++ R E Y++ L +
Sbjct: 10 NGGGSGFPAVSV--GNKKNKYQ-RMDSDAEESQNHREAEARNSRTRKYVMACAFFASLNN 66
Query: 457 TSEEMDVISMSFILPSAQCDLDLT-TQTKGWLNSIIFIGMMVGAYAWGSVADSLGRKRVL 633
DV MS + Q DL +T QT+ + S+ I + G+ A G +DS+GRK +
Sbjct: 67 VLLGYDVGVMSGAVLFIQQDLKITEVQTEVLIGSLSIISLF-GSLAGGRTSDSIGRKWTM 125
Query: 634 IAISIV 651
++V
Sbjct: 126 ALAALV 131
>At3g43590.1 68416.m04638 zinc knuckle (CCHC-type) family protein
contains Pfam domain, PF00098: Zinc knuckle
Length = 551
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = +2
Query: 32 SSPHLTRTVHSHLKWRNAHKQQGRSTSDRHRQAIRCW*RHSPQ*ETFECPRDHHTKPP 205
S+PH + K + HK++ TS R R+ W P+ E+F+ + K P
Sbjct: 403 STPHESNGKTKKKKKKKTHKEEQPQTSPRKRKHRGGWITEEPEEESFQRGKMRRPKSP 460
>At3g43790.3 68416.m04680 transporter-related low similarity to
SP|P39843 Multidrug resistance protein 2
(Multidrug-efflux transporter 2) {Bacillus subtilis};
contains Pfam profile PF00083: major facilitator
superfamily protein
Length = 484
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 541 GWLNSIIFIGMMVGAYAWGSVADSLGRKRVLI 636
G++ S IG + + WG +AD GRK +++
Sbjct: 79 GFVGSSFMIGRALTSIFWGKLADRYGRKPIIL 110
>At3g43790.2 68416.m04679 transporter-related low similarity to
SP|P39843 Multidrug resistance protein 2
(Multidrug-efflux transporter 2) {Bacillus subtilis};
contains Pfam profile PF00083: major facilitator
superfamily protein
Length = 484
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 541 GWLNSIIFIGMMVGAYAWGSVADSLGRKRVLI 636
G++ S IG + + WG +AD GRK +++
Sbjct: 79 GFVGSSFMIGRALTSIFWGKLADRYGRKPIIL 110
>At3g43790.1 68416.m04678 transporter-related low similarity to
SP|P39843 Multidrug resistance protein 2
(Multidrug-efflux transporter 2) {Bacillus subtilis};
contains Pfam profile PF00083: major facilitator
superfamily protein
Length = 478
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 541 GWLNSIIFIGMMVGAYAWGSVADSLGRKRVLI 636
G++ S IG + + WG +AD GRK +++
Sbjct: 79 GFVGSSFMIGRALTSIFWGKLADRYGRKPIIL 110
>At3g05155.1 68416.m00560 sugar transporter, putative similar to
sugar-porter family protein 1 [Arabidopsis thaliana]
GI:14585699; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 327
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 514 DLDLTTQTKGWLNSIIFIGMMVGAYAWGSVADSLGRKRVL 633
DLDL+ S++ G M+GA ++ADS G K L
Sbjct: 58 DLDLSITQFSVFGSLLTFGGMIGALFSATIADSFGCKMTL 97
>At2g43330.1 68415.m05388 sugar transporter family protein similar
to SP|Q96QE2 Proton myo-inositol co-transporter (Hmit)
[Homo sapiens], SP|Q01440 Membrane transporter D1
{Leishmania donovani}; contains Pfam profile PF00083:
major facilitator superfamily protein
Length = 509
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 553 SIIFIGMMVGAYAWGSVADSLGRKRVLIAISIVNALAIV 669
S+ +G M+GA A G + D GRK+ + +V A +
Sbjct: 78 SMALVGAMIGAAAGGWINDYYGRKKATLFADVVFAAGAI 116
>At1g73220.1 68414.m08474 sugar transporter family protein contains
Pfam profile: PF00083 sugar (and other) transporter
Length = 539
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 4/43 (9%)
Frame = +1
Query: 550 NSIIFIGMMVGAYAWGSVADS-LGRKRVLI---AISIVNALAI 666
+++ FIG + G+ +G +ADS GRK+ L+ ++ V A AI
Sbjct: 140 STLFFIGSLFGSGVYGYLADSWFGRKKTLLLSCVLTFVTAFAI 182
>At5g13750.1 68418.m01600 transporter-related
Length = 478
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 541 GWLNSIIFIGMMVGAYAWGSVADSLGRKRVLI 636
G++ +G + AWG VAD GRK V++
Sbjct: 80 GFVGCSFMLGRAFTSVAWGLVADRYGRKPVIL 111
>At5g41310.1 68418.m05020 kinesin motor protein-related
Length = 961
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 49 PHRS*PPEVAERSQTTRKKHIGSSPA 126
P S PPE+ E+S+ K H+G P+
Sbjct: 888 PETSNPPEMFEQSEQNDKAHVGVGPS 913
>At4g36670.1 68417.m05203 mannitol transporter, putative similar to
mannitol transporter [Apium graveolens var. dulce]
GI:12004316; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 493
Score = 28.3 bits (60), Expect = 4.9
Identities = 22/88 (25%), Positives = 36/88 (40%)
Frame = +1
Query: 406 GYGRFHYMLLAVCGLVSTSEEMDVISMSFILPSAQCDLDLTTQTKGWLNSIIFIGMMVGA 585
G RF V +VS D MS + + DL L I+ + +VG+
Sbjct: 12 GVNRFALQCAIVASIVSIIFGYDTGVMSGAMVFIEEDLKTNDVQIEVLTGILNLCALVGS 71
Query: 586 YAWGSVADSLGRKRVLIAISIVNALAIV 669
G +D +GR+ ++ SI+ L +
Sbjct: 72 LLAGRTSDIIGRRYTIVLASILFMLGSI 99
>At4g09670.1 68417.m01588 oxidoreductase family protein similar to
AX110P [Daucus carota] GI:285739; contains Pfam profiles
PF01408: Oxidoreductase family NAD-binding Rossmann
fold, PF02894: Oxidoreductase family C-terminal
alpha/beta domain
Length = 362
Score = 28.3 bits (60), Expect = 4.9
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +1
Query: 490 FILPSAQCDLDLTTQTKGWLNSII 561
FI+P + + TT TK W N ++
Sbjct: 265 FIIPYKETEASFTTSTKAWFNDLV 288
>At4g08878.1 68417.m01463 inorganic phosphate transporter, putative
similar to inorganic phosphate transporter (GI:3869190)
[Arabidopsis thaliana]
Length = 280
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +1
Query: 547 LNSIIFIGMMVGAYAWGSVADSLGRKRVLIAISIVNALAIVA 672
++ + F G +G +G + D LGRKRV ++ + +A
Sbjct: 55 VSGVAFAGTFLGQIFFGCLGDKLGRKRVYGLTLLIMTICSIA 96
>At3g02060.1 68416.m00169 DEAD/DEAH box helicase, putative similar
to C-terminal half of transcription-repair coupling
factor (TRCF) GB:Q55750 [Synechocystis PCC6803];
contains Pfam profile: helicases conserved C-terminal
domain
Length = 823
Score = 28.3 bits (60), Expect = 4.9
Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 1/97 (1%)
Frame = +1
Query: 232 PGPKNPHNCDVKGDLQLNGPGSKTAELGVVPSVKKSKSDPEKGSNSEKADFERAI-ELTG 408
P PKNP D N P K++ D EK + +R I G
Sbjct: 252 PYPKNPIMADFAAQFPYNA----------TPDQKQAFLDVEKDLTERETPMDRLICGDVG 301
Query: 409 YGRFHYMLLAVCGLVSTSEEMDVISMSFILPSAQCDL 519
+G+ L A+ +VST ++ V++ + +L D+
Sbjct: 302 FGKTEVALRAIFCVVSTGKQAMVLAPTIVLAKQHYDV 338
>At1g69690.1 68414.m08020 TCP family transcription factor, putative
similar to PCF1 (GI:2580438) and PCF2 [(GI:2580440)
Oryza sativa]
Length = 325
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/63 (22%), Positives = 28/63 (44%)
Frame = +1
Query: 229 DPGPKNPHNCDVKGDLQLNGPGSKTAELGVVPSVKKSKSDPEKGSNSEKADFERAIELTG 408
DP P + H + L + S + L ++ + + S+P+K + +R ++ G
Sbjct: 2 DPDPDHNHRPNFPLQLLDSSTSSSSTSLAIISTTSEPNSEPKKPPPKRTSTKDRHTKVEG 61
Query: 409 YGR 417
GR
Sbjct: 62 RGR 64
>At5g27360.1 68418.m03267 sugar-porter family protein 2 (SFP2)
identical to sugar-porter family protein 2 [Arabidopsis
thaliana] GI:14585701
Length = 478
Score = 27.9 bits (59), Expect = 6.5
Identities = 20/67 (29%), Positives = 31/67 (46%)
Frame = +1
Query: 433 LAVCGLVSTSEEMDVISMSFILPSAQCDLDLTTQTKGWLNSIIFIGMMVGAYAWGSVADS 612
+AVCG S + S + I DLDL+ S+ +G +GA G +A
Sbjct: 41 IAVCGSFSFGVSLGYTSGAEI--GIMKDLDLSIAQFSAFASLSTLGAAIGALFSGKMAII 98
Query: 613 LGRKRVL 633
LGR++ +
Sbjct: 99 LGRRKTM 105
>At5g42390.1 68418.m05161 metalloendopeptidase identical to
chloroplast processing enzyme metalloendopeptidase
[Arabidopsis thaliana] gi|2827039|gb|AAC39482
Length = 1265
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +3
Query: 75 GGTLTNNKE---EAHRIVTGKLYAVGSATPPSERRLSVPATTIQSRPP 209
GGT +N K + +++ + +A+ PP E S+P T++ +PP
Sbjct: 436 GGTFSNEKTNTADQSKMIKRERHAI---RPPVEHNWSLPGTSVDLKPP 480
>At5g25000.1 68418.m02963 hypothetical protein
Length = 121
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = -3
Query: 500 GRMNDIEMTSISSEVLTRPHTANSM*WKRPYPVSSIARSKSAFSELEPFSGSDFD 336
G +N+ E ++ +L + + + WKR YP+ + K E+E S +D D
Sbjct: 59 GDLNEEEDDNVLMHLLKNNYVFSELDWKRGYPL--LQHQKDEEIEIEDKSNADAD 111
>At3g03090.1 68416.m00305 sugar transporter family protein similar
to xylose permease [Bacillus megaterium] GI:1924928;
contains Pfam profile PF00083: major facilitator
superfamily protein
Length = 503
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +1
Query: 520 DLTTQTKGWLNSIIFIGMMVGAYAWGSVADSLGRKRVLI 636
DL++ G + S G ++G+ SVAD +GR++ LI
Sbjct: 87 DLSSVDVGIITSGSLYGALIGSIVAFSVADIIGRRKELI 125
>At1g04300.1 68414.m00421 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein weak similarity
to ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471;contains Pfam PF00917: Meprin And
TRAF-Homology (MATH) domain
Length = 1052
Score = 27.5 bits (58), Expect = 8.6
Identities = 18/65 (27%), Positives = 28/65 (43%)
Frame = -1
Query: 391 PVRSRLFPNWSPSPDRISIS*LKVRRQARRFWNLGRLVVDPLLHHNCEDSWAPGQFLPSY 212
P + + P PSP +S S R + GRL DP LH+ + ++ P + +
Sbjct: 764 PSSAPIIPAMRPSPITVSSSVQTTTSLPRSVSSAGRLGPDPSLHN--QQTYTPQSYKNAI 821
Query: 211 AGGRL 197
G L
Sbjct: 822 VGNSL 826
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,823,246
Number of Sequences: 28952
Number of extensions: 361532
Number of successful extensions: 1053
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1053
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1422784080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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