Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30360
         (705 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    25   0.79 
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   3.2  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   5.6  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   5.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   5.6  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   5.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   5.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   5.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   5.6  

>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 13/53 (24%), Positives = 23/53 (43%)
 Frame = -3

Query: 658 IDLFCRITIQSRAVLRKRKKTYHCLTNIHYNSGKHFPY*CNVILRNPGVNDLY 500
           + L+  +      V R  +  Y+ LTN+ YN+     Y  NV   N  +  ++
Sbjct: 19  LSLYFSVIYSLLRVKRMMRSWYYLLTNLTYNNTNRKYYWLNVCCLNLSIVTIF 71


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +2

Query: 413 PKLGAMRVQRPRISREKRTSECDFLAVS 496
           P +GAMR +   ISR K   + D+  ++
Sbjct: 446 PLIGAMREELRGISRGKNAKDVDWQKIA 473


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -3

Query: 292 TLPRSPPSHQRHSMKP 245
           T P SPP  Q H + P
Sbjct: 534 TFPPSPPLSQIHDLSP 549


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 10/39 (25%), Positives = 17/39 (43%)
 Frame = -2

Query: 314 RGWPPYCDPPSKPSVASKTLNEADDVIPTKSTRIEYLLT 198
           +GW  + DPP K    S    +  ++       + YL+T
Sbjct: 40  KGWDVFRDPPIKEESGSMANQKCLEITVKILKIVAYLVT 78


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 10/39 (25%), Positives = 17/39 (43%)
 Frame = -2

Query: 314 RGWPPYCDPPSKPSVASKTLNEADDVIPTKSTRIEYLLT 198
           +GW  + DPP K    S    +  ++       + YL+T
Sbjct: 40  KGWDVFRDPPIKEESGSMANQKCLEITVKILKIVAYLVT 78


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 308 WPPYCDPPSKPSVASK 261
           W  + DPP +P+V S+
Sbjct: 32  WNVFDDPPREPTVGSE 47


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 308 WPPYCDPPSKPSVASK 261
           W  + DPP +P+V S+
Sbjct: 32  WNVFDDPPREPTVGSE 47


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 10/39 (25%), Positives = 17/39 (43%)
 Frame = -2

Query: 314 RGWPPYCDPPSKPSVASKTLNEADDVIPTKSTRIEYLLT 198
           +GW  + DPP K    S    +  ++       + YL+T
Sbjct: 40  KGWDVFRDPPIKEESGSMANQKCLEITVKILKIVAYLVT 78


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 10/39 (25%), Positives = 17/39 (43%)
 Frame = -2

Query: 314 RGWPPYCDPPSKPSVASKTLNEADDVIPTKSTRIEYLLT 198
           +GW  + DPP K    S    +  ++       + YL+T
Sbjct: 40  KGWDVFRDPPIKEESGSMANQKCLEITVKILKIVAYLVT 78


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,219
Number of Sequences: 336
Number of extensions: 4046
Number of successful extensions: 20
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)