Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30360
         (705 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC041803-1|AAH41803.1|  177|Homo sapiens ARL17P1 protein protein.      32   1.7  
BC030570-1|AAH30570.1|  160|Homo sapiens ADP-ribosylation factor...    32   1.7  
AB209344-1|BAD92581.1|  179|Homo sapiens ADP-ribosylation factor...    32   1.7  
AL512408-3|CAI23484.1| 2285|Homo sapiens AT rich interactive dom...    30   7.0  
AL034380-9|CAI21623.1| 2285|Homo sapiens AT rich interactive dom...    30   7.0  
AF521670-1|AAN03446.1| 1999|Homo sapiens SWI/SNF chromatin remod...    30   7.0  
AF231056-1|AAG33967.1| 2285|Homo sapiens BRG1-Associated Factor ...    30   7.0  

>BC041803-1|AAH41803.1|  177|Homo sapiens ARL17P1 protein protein.
          Length = 177

 Score = 32.3 bits (70), Expect = 1.7
 Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
 Frame = -3

Query: 460 FPRDPGSLNPHRTEFGQLSIGCWSLRVTE*KSTVCSGGHSH-FL--RGECTGGGGHPIAT 290
           F    G+ +P  T  G L+ G   ++ +  +  +  GG SH FL     C G GG   + 
Sbjct: 82  FQNTKGARSPGSTHQGSLASGVLPIKCSHVEFGMWKGGRSHPFLPHSSRCAGSGGQLDSI 141

Query: 289 LPRSPPS 269
           LP   P+
Sbjct: 142 LPHQSPA 148


>BC030570-1|AAH30570.1|  160|Homo sapiens ADP-ribosylation
           factor-like 17 protein.
          Length = 160

 Score = 32.3 bits (70), Expect = 1.7
 Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
 Frame = -3

Query: 460 FPRDPGSLNPHRTEFGQLSIGCWSLRVTE*KSTVCSGGHSH-FL--RGECTGGGGHPIAT 290
           F    G+ +P  T  G L+ G   ++ +  +  +  GG SH FL     C G GG   + 
Sbjct: 65  FQNTKGARSPGSTHQGSLASGVLPIKCSHVEFGMWKGGRSHPFLPHSSRCAGSGGQLDSI 124

Query: 289 LPRSPPS 269
           LP   P+
Sbjct: 125 LPHQSPA 131


>AB209344-1|BAD92581.1|  179|Homo sapiens ADP-ribosylation factor 7
           variant protein.
          Length = 179

 Score = 32.3 bits (70), Expect = 1.7
 Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
 Frame = -3

Query: 460 FPRDPGSLNPHRTEFGQLSIGCWSLRVTE*KSTVCSGGHSH-FL--RGECTGGGGHPIAT 290
           F    G+ +P  T  G L+ G   ++ +  +  +  GG SH FL     C G GG   + 
Sbjct: 84  FQNTKGARSPGSTHQGSLASGVLPIKCSHVEFGMWKGGRSHPFLPHSSRCAGSGGQLDSI 143

Query: 289 LPRSPPS 269
           LP   P+
Sbjct: 144 LPHQSPA 150


>AL512408-3|CAI23484.1| 2285|Homo sapiens AT rich interactive domain
           1A (SWI-like) protein.
          Length = 2285

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 6/57 (10%)
 Frame = -3

Query: 397 CWSLRVTE*KSTVCSGG---HSHF--LRGECTGGGGHPIATLPR-SPPSHQRHSMKP 245
           CW        +   SGG    SH   +    +GGGG P+A  P+ S P  Q   M+P
Sbjct: 336 CWGAAAAAAAAAAASGGAQQRSHHAPMSPGSSGGGGQPLARTPQPSSPMDQMGKMRP 392


>AL034380-9|CAI21623.1| 2285|Homo sapiens AT rich interactive domain
           1A (SWI-like) protein.
          Length = 2285

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 6/57 (10%)
 Frame = -3

Query: 397 CWSLRVTE*KSTVCSGG---HSHF--LRGECTGGGGHPIATLPR-SPPSHQRHSMKP 245
           CW        +   SGG    SH   +    +GGGG P+A  P+ S P  Q   M+P
Sbjct: 336 CWGAAAAAAAAAAASGGAQQRSHHAPMSPGSSGGGGQPLARTPQPSSPMDQMGKMRP 392


>AF521670-1|AAN03446.1| 1999|Homo sapiens SWI/SNF chromatin
           remodeling complex subunit OSA1 protein.
          Length = 1999

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 6/57 (10%)
 Frame = -3

Query: 397 CWSLRVTE*KSTVCSGG---HSHF--LRGECTGGGGHPIATLPR-SPPSHQRHSMKP 245
           CW        +   SGG    SH   +    +GGGG P+A  P+ S P  Q   M+P
Sbjct: 50  CWGAAAAAAAAAAASGGAQQRSHHAPMSPGSSGGGGQPLARTPQPSSPMDQMGKMRP 106


>AF231056-1|AAG33967.1| 2285|Homo sapiens BRG1-Associated Factor
           250a protein.
          Length = 2285

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 6/57 (10%)
 Frame = -3

Query: 397 CWSLRVTE*KSTVCSGG---HSHF--LRGECTGGGGHPIATLPR-SPPSHQRHSMKP 245
           CW        +   SGG    SH   +    +GGGG P+A  P+ S P  Q   M+P
Sbjct: 336 CWGAAAAAAAAAAASGGAQQRSHHAPMSPGSSGGGGQPLARTPQPSSPMDQMGKMRP 392


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,073,842
Number of Sequences: 237096
Number of extensions: 2356537
Number of successful extensions: 5065
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5065
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8175213644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)