Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30355
(759 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_1105 + 30438140-30438350,30438448-30438926 55 5e-08
05_04_0254 - 19444409-19444621,19444724-19444887,19444974-194450... 52 7e-07
03_06_0292 - 32886148-32886354,32886997-32887154,32887265-328873... 49 5e-06
07_01_0554 - 4121692-4121895,4121991-4122148,4123241-4123354,412... 40 0.003
07_01_0553 - 4119782-4119988,4120160-4120320,4120861-4121155 40 0.003
03_06_0293 - 32889813-32890019,32890144-32890301,32891310-328914... 39 0.004
11_06_0192 + 21128298-21128829,21129341-21129407,21131169-211312... 38 0.007
01_07_0095 + 41053562-41053603,41054609-41054846,41055064-410553... 35 0.061
04_04_0885 - 29086426-29086767 34 0.14
01_05_0710 + 24492337-24493053 34 0.14
09_03_0089 + 12265916-12267232 30 1.7
07_03_1631 - 28258897-28259984,28260518-28260772,28260861-282609... 30 1.7
04_03_0444 - 16006619-16006733,16006754-16007048,16008265-16008967 30 1.7
04_01_0031 + 381389-381841 30 1.7
08_01_0651 + 5622786-5624165,5624720-5624881,5624984-5625173,562... 30 2.3
04_04_0824 - 28399144-28399385,28400193-28400312,28400422-284004... 30 2.3
04_01_0082 + 897026-897028,897101-897350,898454-898608,898686-89... 30 2.3
08_02_0041 + 11531010-11531366,11531409-11531657 29 3.0
04_04_0760 - 27837170-27837328,27837441-27837504,27837812-278381... 29 3.0
04_04_0662 - 27051508-27051828,27051878-27053438,27054333-27054733 29 3.0
02_04_0470 - 23183925-23184743,23184929-23185153 29 3.0
03_02_0444 - 8543426-8543635,8543945-8544151,8544293-8544400,854... 29 4.0
03_01_0201 - 1592180-1592218,1592517-1592602,1592966-1593064,159... 29 4.0
10_01_0037 + 434995-436299 29 5.3
05_03_0122 - 8669422-8669609,8669759-8670111,8670669-8670824,867... 29 5.3
12_02_1123 - 26250300-26250362,26251988-26252042,26252128-262522... 28 7.0
12_02_0065 - 13109652-13110746,13110843-13111762,13139462-131395... 28 7.0
09_02_0325 + 7276650-7276770,7276979-7277055,7277146-7277188,727... 28 7.0
02_04_0090 - 19643182-19643322,19644192-19644335,19644563-196446... 28 7.0
10_08_0888 - 21317163-21317687,21318044-21318153,21318258-21318408 28 9.3
08_02_0969 - 23126389-23126670,23126764-23126947,23127017-231278... 28 9.3
08_01_0445 + 3942820-3943030,3943719-3943853,3943942-3944150,394... 28 9.3
04_04_1400 - 33259716-33260069,33260172-33260219,33260471-332605... 28 9.3
03_04_0105 - 17322276-17322399,17322516-17322740,17323388-173235... 28 9.3
02_02_0379 + 9565001-9565515,9565553-9565833,9565884-9566084,956... 28 9.3
02_01_0302 - 2021221-2023305 28 9.3
>03_05_1105 + 30438140-30438350,30438448-30438926
Length = 229
Score = 55.2 bits (127), Expect = 5e-08
Identities = 27/84 (32%), Positives = 49/84 (58%)
Frame = +2
Query: 503 IRRAFIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMFWVAFIVLIVCLIAMAC 682
+R AF+RKVYAIL Q+++T+ ++ ++ RP ++ P F + ++I+ I +
Sbjct: 15 LRWAFVRKVYAILSIQMLLTIAVASVVVFVRPVALFFVSTPAGFALYIFLIILPFIVLCP 74
Query: 683 CPDVRRKAPTNFIFLAIFTAAQNF 754
++ P N + LA+FTAA +F
Sbjct: 75 LYYYYQRHPVNLLLLALFTAAISF 98
>05_04_0254 -
19444409-19444621,19444724-19444887,19444974-19445087,
19446086-19446395
Length = 266
Score = 51.6 bits (118), Expect = 7e-07
Identities = 27/92 (29%), Positives = 47/92 (51%)
Frame = +2
Query: 479 GFDFTEKSIRRAFIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMFWVAFIVLI 658
G E ++R F+RKVY IL QL++T AL + H ++ +P + A ++ +
Sbjct: 43 GISRGESALRWGFVRKVYGILAAQLLLTTAVSALTVLHPTLNATLSSSPTL---ALVLAV 99
Query: 659 VCLIAMACCPDVRRKAPTNFIFLAIFTAAQNF 754
+ + M + K P NF++L +FT +F
Sbjct: 100 LPFVLMVPLYHYQHKHPHNFVYLGLFTLCLSF 131
>03_06_0292 -
32886148-32886354,32886997-32887154,32887265-32887378,
32887660-32887924
Length = 247
Score = 48.8 bits (111), Expect = 5e-06
Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +2
Query: 503 IRRAFIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMFWVAFIVLIVC-LIAMA 679
+R AFIRKVY I+ QL+VT+ P K + VA++++I+ LI M
Sbjct: 32 LRWAFIRKVYVIVSVQLLVTVAVAGAVNLVEPIKTFFQARTPEVLVAYVIIIISPLIMML 91
Query: 680 CCPDVRRKAPTNFIFLAIFTAAQNF 754
R K P N FL +FT +F
Sbjct: 92 PMIYFRNKHPINLFFLLLFTVCISF 116
>07_01_0554 -
4121692-4121895,4121991-4122148,4123241-4123354,
4123824-4124082
Length = 244
Score = 39.5 bits (88), Expect = 0.003
Identities = 24/84 (28%), Positives = 40/84 (47%)
Frame = +2
Query: 503 IRRAFIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMFWVAFIVLIVCLIAMAC 682
+R A IRK+Y IL QL++T A+ + R + + + ++I+ I +
Sbjct: 31 MRWALIRKIYVILSMQLLLTAAVAAVVVKVRAISHFFVSSHAGLGLYIFLIILPFIVLCP 90
Query: 683 CPDVRRKAPTNFIFLAIFTAAQNF 754
+K P N I L +FT A +F
Sbjct: 91 LYYYHQKHPVNLILLGLFTVAISF 114
>07_01_0553 - 4119782-4119988,4120160-4120320,4120861-4121155
Length = 220
Score = 39.5 bits (88), Expect = 0.003
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Frame = +2
Query: 452 SVGEDGEVKGFDFTEKSIRRAFIRKVYAILMCQLMVTMGFIALFLYHRPT--KVWVAQNP 625
+VG G + +R AFIRKVYAI+ QL+VT+ IA +Y P + ++A+ P
Sbjct: 25 AVGVAGVACTYMIERPELRWAFIRKVYAIVATQLVVTVA-IAAAVYSVPAIRRFFLARTP 83
Query: 626 FMFWVAFIVLIVCLIA 673
+V++ LIA
Sbjct: 84 ASLAAFVLVIVAPLIA 99
>03_06_0293 -
32889813-32890019,32890144-32890301,32891310-32891423,
32891531-32891777
Length = 241
Score = 39.1 bits (87), Expect = 0.004
Identities = 24/84 (28%), Positives = 38/84 (45%)
Frame = +2
Query: 503 IRRAFIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMFWVAFIVLIVCLIAMAC 682
+R A I K+Y IL QL +T A + R + + F + +L + LI +
Sbjct: 27 LRWALIHKIYVILSVQLAMTAAVAAFVVKVRGVSEFFVSSNAGFALYIFLLFLPLIVLCP 86
Query: 683 CPDVRRKAPTNFIFLAIFTAAQNF 754
+K P N + L +FT A +F
Sbjct: 87 LRYYHQKHPVNLLLLGLFTVAISF 110
>11_06_0192 +
21128298-21128829,21129341-21129407,21131169-21131211,
21131301-21131367,21131613-21131770,21131863-21132057
Length = 353
Score = 38.3 bits (85), Expect = 0.007
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +2
Query: 503 IRRAFIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMFWVAFIVLIVCLIAMAC 682
+R AF+RKVY IL Q VT + RP + A W+ ++ +++C C
Sbjct: 79 LRWAFVRKVYCILALQFAVTAAIAVVAWAVRPIPRFFAAGSLASWLVYLAILLCPFIGLC 138
>01_07_0095 +
41053562-41053603,41054609-41054846,41055064-41055312,
41055419-41055469,41056044-41056256,41056305-41056367,
41056422-41056474,41056953-41057067,41057150-41057404,
41057531-41058618
Length = 788
Score = 35.1 bits (77), Expect = 0.061
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = +2
Query: 488 FTEKSIRRAFIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMFWVAFIVLIVCL 667
FT S+R AFI +Y L+ Q M F++ + PT + + +FW F+V +
Sbjct: 297 FTSASVRLAFITIIYPCLILQYMGQAAFLSKNILDMPTGFYDSIPGPIFWPVFVVATLAA 356
Query: 668 I 670
+
Sbjct: 357 V 357
>04_04_0885 - 29086426-29086767
Length = 113
Score = 33.9 bits (74), Expect = 0.14
Identities = 31/98 (31%), Positives = 41/98 (41%), Gaps = 7/98 (7%)
Frame = +1
Query: 136 QNGFGKTKLEGPT-KLRE---HVSESRRTVPSG---RGVPARWTVPARWTVPARWTIPTG 294
+ G +T GP + RE + RRT P+G R A W A T A PT
Sbjct: 20 RTGASRTAAHGPADRQRESHARMGVPRRTSPAGTIQRRAFAGWNASAHHTSSAAPPRPTA 79
Query: 295 WRLPARWSLPSRRSVSPGWSIPAGRICAPSAWLPTCIW 408
RL A + R VS G + P A +AW + +W
Sbjct: 80 TRLAAVAARDDHRVVSAGGATPP----AATAWKASALW 113
>01_05_0710 + 24492337-24493053
Length = 238
Score = 33.9 bits (74), Expect = 0.14
Identities = 20/49 (40%), Positives = 29/49 (59%)
Frame = -3
Query: 445 RWDIARFTVTCAAICRLEARLRGRISALRVCSTRGIRSSWRVSSTLRVA 299
R D A F V A +CRLE R ++ALR + GIR+S ++ ++R A
Sbjct: 153 RPDSATFAVAVAGLCRLEDP-RNALAALREMAVDGIRTSAKLRESVRDA 200
>09_03_0089 + 12265916-12267232
Length = 438
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/54 (35%), Positives = 24/54 (44%)
Frame = +1
Query: 556 GDDGFHRSVPVPPTDQSLGGPKSLHVLGGLHSADSLSHRDGVLSRRETQSSDEL 717
G H + P P + LGG SL GGL S+D+L H + DEL
Sbjct: 330 GGARLHDASPSPSFSEFLGGGISLTDGGGLMSSDALHHHLPTRNDAHHHGGDEL 383
>07_03_1631 -
28258897-28259984,28260518-28260772,28260861-28260975,
28261097-28261149,28261238-28261498,28262122-28262175,
28262294-28262536,28262830-28263073,28263877-28263909
Length = 781
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/61 (24%), Positives = 28/61 (45%)
Frame = +2
Query: 488 FTEKSIRRAFIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMFWVAFIVLIVCL 667
FT SIR AF+ +Y L+ Q M F++ + + + +FW F++ +
Sbjct: 290 FTAASIRLAFVGAIYPCLVLQYMGQAAFLSRNMSAVEDSFYQSVPRSLFWPVFVIATLAA 349
Query: 668 I 670
+
Sbjct: 350 V 350
>04_03_0444 - 16006619-16006733,16006754-16007048,16008265-16008967
Length = 370
Score = 30.3 bits (65), Expect = 1.7
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = +1
Query: 178 LREHVSESRRTVPSGRGVPARW--TVPARWTVPARWTIPTGWRLP-ARWSLPSRRSVSPG 348
L ++++ SR SGR W T + P + LP +R + RRSVSP
Sbjct: 139 LHQYIAISRTLTSSGRVTTTTWSSTSDVAFLPPLPLQVVELRLLPGSRPVIDQRRSVSPT 198
Query: 349 WSIPAGRICAPSAWLPT 399
S +GR+ +AW T
Sbjct: 199 TSTSSGRV-TTTAWFST 214
>04_01_0031 + 381389-381841
Length = 150
Score = 30.3 bits (65), Expect = 1.7
Identities = 23/65 (35%), Positives = 26/65 (40%), Gaps = 5/65 (7%)
Frame = +1
Query: 181 REHVSESRRTVP--SGR---GVPARWTVPARWTVPARWTIPTGWRLPARWSLPSRRSVSP 345
R H S R +P GR GVP T RW P T+ W LP S P + P
Sbjct: 42 RRHGSWGRLPLPRTDGRTRTGVPPPRTRERRWCTPRTSTLRREWALPDTASPPPPLPLEP 101
Query: 346 GWSIP 360
S P
Sbjct: 102 APSAP 106
>08_01_0651 +
5622786-5624165,5624720-5624881,5624984-5625173,
5625253-5625284
Length = 587
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 598 DQSLGGPKSLHVLGGLHSADSLSHRDGVLSRRETQS 705
D++LGG LH L S + L+H V+ RE++S
Sbjct: 434 DKTLGGQNVLHSLSNARSLELLAHSGEVVLSRESRS 469
>04_04_0824 -
28399144-28399385,28400193-28400312,28400422-28400453,
28400531-28400625,28400713-28400786,28400883-28401018,
28401096-28401333,28401508-28401555,28401593-28401780,
28401862-28401983,28402061-28402226,28402321-28402443,
28403068-28403139,28403244-28403351,28404212-28404328,
28404458-28404596,28404702-28404808,28404904-28405013,
28405141-28405274,28405348-28405497,28405571-28405791,
28405868-28406677,28410261-28410473
Length = 1254
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = +1
Query: 508 QGFHPKGVRDPDVSADGDDGFHRSVPVPPTDQSLGGPKSLHVLGG 642
QG H G P+ G G H PP Q GG S H GG
Sbjct: 150 QGSHHPGGGPPEYQGRGGPGSHHPGGGPPDYQGRGGSGSHHPGGG 194
>04_01_0082 +
897026-897028,897101-897350,898454-898608,898686-898967,
899078-899160,899335-899485,899896-899952,900279-900479
Length = 393
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/81 (24%), Positives = 33/81 (40%)
Frame = -3
Query: 757 QKVLRCRKDGQEYEVRRSFASHVGTARHRDETDYQHYEGHPEHEGILGHPDFGRSVVQEQ 578
QKV C ++Y++ F SH+ + H DY + + G+ + Q+Q
Sbjct: 199 QKVFFCSLCNKQYKLAHEFESHLSSYDHNHRKDYISDKFTVVTTEVQGN-ERNAKQQQQQ 257
Query: 577 SDETHRHHQLTHQDRVHLSDE 515
+ HR Q Q+ S E
Sbjct: 258 PADAHRKQQQQKQEPSESSSE 278
>08_02_0041 + 11531010-11531366,11531409-11531657
Length = 201
Score = 29.5 bits (63), Expect = 3.0
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 14/78 (17%)
Frame = -3
Query: 715 VRRSFASHVGTARHRDETDYQHYEGHPEHEGI-------LGHPDF-GRSVV------QEQ 578
+RR+ HV R + H+ G +H+ + L P F G+ V+ +EQ
Sbjct: 115 MRRNMRRHVHPRRGAVLGNGGHHRGRHDHDDLDNVARVKLSVPKFTGKDVLDAYLYWEEQ 174
Query: 577 SDETHRHHQLTHQDRVHL 524
D+ R H L+HQ RV+L
Sbjct: 175 CDQIFRVHNLSHQRRVNL 192
>04_04_0760 -
27837170-27837328,27837441-27837504,27837812-27838160,
27838906-27838960,27839489-27839821
Length = 319
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +3
Query: 147 WKN*TRRTNQITRACIRIKADRTLRAGRTRKVDRTRKVDRTRKV 278
W+ ++ NQ+ R+C R+ A R + T+K D ++ + KV
Sbjct: 90 WQQQQQQHNQLNRSCSRVLAQRLCKGTDTQKKDAALEILKEIKV 133
>04_04_0662 - 27051508-27051828,27051878-27053438,27054333-27054733
Length = 760
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = -3
Query: 586 QEQSDETHRHHQLTHQDRVHLSDESPAYRFFSEIETLDFA 467
+E+ + H++++ T + R D +YRFF+E+E L A
Sbjct: 149 KEKFENVHKYYKRTKEGRAGRQD-GKSYRFFTELEALHAA 187
>02_04_0470 - 23183925-23184743,23184929-23185153
Length = 347
Score = 29.5 bits (63), Expect = 3.0
Identities = 21/85 (24%), Positives = 35/85 (41%)
Frame = +1
Query: 136 QNGFGKTKLEGPTKLREHVSESRRTVPSGRGVPARWTVPARWTVPARWTIPTGWRLPARW 315
++G G L + H + P+G+ P R A ++P G R+ RW
Sbjct: 114 KSGGGDLILLRERPIVHHTCQPPHPKPAGKATPRRGRWVATSSLPPSLPAQPGMRVAHRW 173
Query: 316 SLPSRRSVSPGWSIPAGRICAPSAW 390
S R++ P P+ R + S+W
Sbjct: 174 SPAKARALPPP---PSLRYPSRSSW 195
>03_02_0444 -
8543426-8543635,8543945-8544151,8544293-8544400,
8544744-8544803,8544914-8544989,8545190-8545347,
8545479-8545541,8545653-8545737,8546423-8547438
Length = 660
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = -3
Query: 352 STRGIRSSWRVSSTLRVASTLWVWSTLRVRSTLRVRSTLRVRPALRVRSALILIHALV 179
S R +R+S R +S++ V +W W +R + ST + LIL H+L+
Sbjct: 578 SIRSMRTSSRSNSSILVLLIMWSWPGRTIRYREAILSTAQSSTPTIAFHLLILSHSLL 635
>03_01_0201 -
1592180-1592218,1592517-1592602,1592966-1593064,
1593131-1593232,1593398-1593525,1593602-1593693,
1593798-1593869,1593964-1594032,1594116-1594199,
1594292-1594407,1594752-1594875,1594947-1595053,
1595725-1595875
Length = 422
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
Frame = -2
Query: 371 IRPAGMLHPGDTLLLE---GKLHLAGSLHPVGMV 279
++P +HP D L+LE G++ LAG++ P V
Sbjct: 93 VKPHNFMHPDDHLILEDESGRVTLAGAIPPAAYV 126
>10_01_0037 + 434995-436299
Length = 434
Score = 28.7 bits (61), Expect = 5.3
Identities = 18/49 (36%), Positives = 20/49 (40%), Gaps = 8/49 (16%)
Frame = +1
Query: 358 PAGRICAPSAWLPTCIWRRRLR*TGLYPTERLSR--------RRWRSQG 480
P GR C LP +WR R P R+ RRWRSQG
Sbjct: 263 PLGRRCTDFQLLPAALWRCRTAALPYAPHRRVRAYLPLSTRGRRWRSQG 311
>05_03_0122 -
8669422-8669609,8669759-8670111,8670669-8670824,
8670999-8671168,8672133-8672297,8673190-8673384,
8673506-8673634,8673759-8673980
Length = 525
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +1
Query: 202 RRTVPSGRGVPARWTVPARWTVPARWTIPTGWRLPARW-SLPSR 330
R+T PS P+ + +P R W + GW LP+ + ++P++
Sbjct: 28 RKTPPSPPPPPSSFGLPVRAVCLGGWLVTEGWILPSLFDAIPNK 71
>12_02_1123 -
26250300-26250362,26251988-26252042,26252128-26252224,
26252364-26253048,26253354-26253721,26253931-26254074,
26254925-26255276
Length = 587
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +3
Query: 243 DRTRKVDRTR-KVDHTHRVEATRKVELTLQEERIPRVE 353
DR + V R + D+ HRVE T+K L Q E RVE
Sbjct: 218 DRKKDVPPPRMQFDNVHRVEKTKKHSLVNQAEAQNRVE 255
>12_02_0065 -
13109652-13110746,13110843-13111762,13139462-13139528,
13139607-13139675,13139877-13140020,13140100-13140171,
13140316-13140387,13140466-13140558,13140655-13140726,
13140809-13140925
Length = 906
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/30 (53%), Positives = 17/30 (56%)
Frame = +1
Query: 247 VPARWTVPARWTIPTGWRLPARWSLPSRRS 336
V A PAR P+ WR P R S PSRRS
Sbjct: 6 VAAAAAAPARSRWPS-WRTPPRSSTPSRRS 34
>09_02_0325 +
7276650-7276770,7276979-7277055,7277146-7277188,
7277276-7277333,7277922-7277991,7278202-7278670,
7278895-7278959
Length = 300
Score = 28.3 bits (60), Expect = 7.0
Identities = 19/58 (32%), Positives = 23/58 (39%)
Frame = +1
Query: 577 SVPVPPTDQSLGGPKSLHVLGGLHSADSLSHRDGVLSRRETQSSDELHIPGHLYGSAK 750
S P P ++ G S GG + A RD LSR E + D PG S K
Sbjct: 179 STPAPTSESPTQGVPSNRDNGGQNEATKSPQRDDSLSRHEPLTPDSNCQPGSPTASPK 236
>02_04_0090 -
19643182-19643322,19644192-19644335,19644563-19644626,
19644710-19644796,19645371-19645513,19645706-19645771,
19645954-19646046,19646165-19646230,19646363-19646433,
19646882-19646982,19647217-19647317,19647421-19647528,
19647639-19648064
Length = 536
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/52 (28%), Positives = 19/52 (36%)
Frame = -2
Query: 434 SPVHRNLRRHMQVGSQAEGAHIRPAGMLHPGDTLLLEGKLHLAGSLHPVGMV 279
SP H +L H++V G H P D G + G P G V
Sbjct: 35 SPYHHHLHLHLRVAHHHHGRHPHPPSPRWRHDVRARAGTIQAPGLARPGGAV 86
>10_08_0888 - 21317163-21317687,21318044-21318153,21318258-21318408
Length = 261
Score = 27.9 bits (59), Expect = 9.3
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +1
Query: 157 KLEGPTKLREHVSESRRTVPSGRGVPARW 243
+L+GP LR VSES +TV + + +PA W
Sbjct: 221 RLQGPFSLRM-VSESGQTVIAHQVIPANW 248
>08_02_0969 -
23126389-23126670,23126764-23126947,23127017-23127834,
23127953-23128642
Length = 657
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +1
Query: 526 GVRDPDVSADGDDGFHRSVPVPPTDQSLGGPKS 624
G DP AD +DG P PP+ G +S
Sbjct: 549 GTLDPMADADANDGSQMQTPAPPSPAGEGRRRS 581
>08_01_0445 +
3942820-3943030,3943719-3943853,3943942-3944150,
3944258-3944464
Length = 253
Score = 27.9 bits (59), Expect = 9.3
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +1
Query: 460 RRWRSQGFRFH*KIYTQGFHPKGVRDPDVSADGDDGFHRSVPVPPTD 600
RR +GFR F+P G D +S D DD P PPT+
Sbjct: 42 RRAAEEGFRLR-----VAFNPSGNFDLSLSTDQDDAPQVEPPPPPTE 83
>04_04_1400 -
33259716-33260069,33260172-33260219,33260471-33260596,
33260850-33260900,33260963-33261055,33261217-33261272,
33261465-33261522,33262306-33262365,33262513-33262623,
33263368-33263949,33264026-33264097
Length = 536
Score = 27.9 bits (59), Expect = 9.3
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
Frame = +1
Query: 571 HRSVPVPPTDQ----SLGGPKSLHVLGGLHSADSLSHRDGVL 684
H++ P PP DQ SLG S L LH++ S S D +L
Sbjct: 17 HQASPPPPIDQQAAESLGKSPSASDLTALHASSSSSAADALL 58
>03_04_0105 -
17322276-17322399,17322516-17322740,17323388-17323588,
17324705-17324794,17324945-17325059,17325238-17325439
Length = 318
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 29 WLCSSKATKIVFVK*INCEVHCVEV*TSGDCKWNFNKTA-LEKLNSKD 169
W C+ +A+ +F+ + ++H + + DC W F +EK KD
Sbjct: 105 WTCTCRASDSIFIDCYSDDLHYAHIQSLLDCSWWFRVVRDVEKDLKKD 152
>02_02_0379 +
9565001-9565515,9565553-9565833,9565884-9566084,
9566253-9566309,9566955-9567019,9567199-9567420
Length = 446
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +1
Query: 295 WRLPARWSLPSRRSVSPGWSIPAGRICA-PSAWLPTCIWRRRLR 423
+RL RW P R S++P + P + A P A +P R++R
Sbjct: 150 YRLSPRWRSPDRLSITPTTAAPPATVLASPHAPMPLPDEPRKVR 193
>02_01_0302 - 2021221-2023305
Length = 694
Score = 27.9 bits (59), Expect = 9.3
Identities = 17/57 (29%), Positives = 24/57 (42%)
Frame = +1
Query: 214 PSGRGVPARWTVPARWTVPARWTIPTGWRLPARWSLPSRRSVSPGWSIPAGRICAPS 384
P G P+ + P+ T P+ + P G P+ S PS + P S P PS
Sbjct: 486 PPGSTTPSYPSPPSSSTTPSYHSPPQGHTTPSHPSPPSSSTAPPSHSPPQSTPTHPS 542
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,493,277
Number of Sequences: 37544
Number of extensions: 496086
Number of successful extensions: 1780
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1767
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2027850416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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