Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30355
(759 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70753-11|CAA94766.1| 244|Caenorhabditis elegans Hypothetical p... 74 1e-13
Z70753-10|CAD44125.1| 296|Caenorhabditis elegans Hypothetical p... 67 1e-11
Z70753-1|CAD44126.1| 296|Caenorhabditis elegans Hypothetical pr... 67 1e-11
U28740-4|AAA68319.2| 276|Caenorhabditis elegans Temporarily ass... 45 5e-05
U23147-2|AAC46688.1| 918|Caenorhabditis elegans Hypothetical pr... 32 0.51
U80931-1|AAB37998.2| 343|Caenorhabditis elegans Hypothetical pr... 29 2.7
AF039053-9|AAN84838.1| 131|Caenorhabditis elegans Hypothetical ... 29 3.6
AF039053-8|AAC25878.1| 178|Caenorhabditis elegans Hypothetical ... 29 3.6
Z79759-5|CAB02140.2| 409|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z77657-1|CAB01144.1| 130|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z68108-2|CAA92135.1| 406|Caenorhabditis elegans Hypothetical pr... 29 4.7
U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical pr... 29 4.7
AF039052-4|AAF98630.1| 981|Caenorhabditis elegans Proteasome re... 29 4.7
Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical pr... 28 6.3
U56963-2|AAB38119.2| 326|Caenorhabditis elegans Neuropeptide-li... 28 6.3
U00065-8|AAL02473.1| 501|Caenorhabditis elegans Hypothetical pr... 28 6.3
U00065-7|AAL02474.1| 1090|Caenorhabditis elegans Hypothetical pr... 28 6.3
U00065-6|AAL02472.1| 1051|Caenorhabditis elegans Hypothetical pr... 28 6.3
L23648-7|AAA28031.2| 962|Caenorhabditis elegans Abnormal cell l... 28 6.3
AF408759-1|AAO27838.1| 279|Caenorhabditis elegans LIN-36 protein. 28 6.3
AF104917-1|AAD22772.1| 962|Caenorhabditis elegans LIN-36 protein. 28 6.3
Z83218-3|CAB05688.1| 330|Caenorhabditis elegans Hypothetical pr... 28 8.3
U88173-11|AAK21390.1| 329|Caenorhabditis elegans Hypothetical p... 28 8.3
U18385-1|AAA62505.1| 276|Caenorhabditis elegans collagen protein. 28 8.3
AC006834-6|AAF40004.1| 233|Caenorhabditis elegans Hypothetical ... 28 8.3
>Z70753-11|CAA94766.1| 244|Caenorhabditis elegans Hypothetical
protein F40F9.2 protein.
Length = 244
Score = 73.7 bits (173), Expect = 1e-13
Identities = 30/84 (35%), Positives = 53/84 (63%)
Frame = +2
Query: 488 FTEKSIRRAFIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMFWVAFIVLIVCL 667
F+ +++R AF+RKV+ ++ +T F + + P + WV N +++++A IV +V
Sbjct: 22 FSSQTVRAAFVRKVFMLVTIMFAITAAFCVIPMVSEPFQDWVKNNFWVYFIAIIVFLVVA 81
Query: 668 IAMACCPDVRRKAPTNFIFLAIFT 739
IA++CC ++RR+ P N I L IFT
Sbjct: 82 IALSCCGNLRRQFPVNIILLTIFT 105
>Z70753-10|CAD44125.1| 296|Caenorhabditis elegans Hypothetical
protein F40F9.1a protein.
Length = 296
Score = 66.9 bits (156), Expect = 1e-11
Identities = 30/98 (30%), Positives = 54/98 (55%)
Frame = +2
Query: 464 DGEVKGFDFTEKSIRRAFIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMFWVA 643
DG+ F F++K++R AF+RKV++++ L + + H T V +N ++ +
Sbjct: 67 DGKYS-FQFSDKTVRAAFVRKVFSLVFIMLCIVAAVTVIPWVHDDTMRMVRRNSALYLGS 125
Query: 644 FIVLIVCLIAMACCPDVRRKAPTNFIFLAIFTAAQNFL 757
+++ V +++ CC VRRK P N I IFT A + +
Sbjct: 126 YVIFFVTYLSLVCCEGVRRKFPVNLIVTGIFTLATSVM 163
>Z70753-1|CAD44126.1| 296|Caenorhabditis elegans Hypothetical
protein F40F9.1b protein.
Length = 296
Score = 66.9 bits (156), Expect = 1e-11
Identities = 30/98 (30%), Positives = 54/98 (55%)
Frame = +2
Query: 464 DGEVKGFDFTEKSIRRAFIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMFWVA 643
DG+ F F++K++R AF+RKV++++ L + + H T V +N ++ +
Sbjct: 67 DGKYS-FQFSDKTVRAAFVRKVFSLVFIMLCIVAAVTVIPWVHDDTMRMVRRNSALYLGS 125
Query: 644 FIVLIVCLIAMACCPDVRRKAPTNFIFLAIFTAAQNFL 757
+++ V +++ CC VRRK P N I IFT A + +
Sbjct: 126 YVIFFVTYLSLVCCEGVRRKFPVNLIVTGIFTLATSVM 163
>U28740-4|AAA68319.2| 276|Caenorhabditis elegans Temporarily
assigned gene nameprotein 132 protein.
Length = 276
Score = 45.2 bits (102), Expect = 5e-05
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Frame = +2
Query: 455 VGEDGEVKG-FDFTEKSIRRAFIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFM 631
V DG + G + IR AF+RKV I+ QL+ T+G A +Y+ P + Q
Sbjct: 52 VDADGILPGCVGKANRMIRIAFLRKVLGIVGFQLLFTIGICAA-IYNIPNSNQLLQKHA- 109
Query: 632 FWVAFIVLIVCLIAMACCPDVRRKAPTNFIFLAIFTAAQ 748
W+ F L+ + + R+ P N++ LA FTA Q
Sbjct: 110 -WIVFPNLLGSIALIIALHVYAREVPLNYVLLAAFTAVQ 147
>U23147-2|AAC46688.1| 918|Caenorhabditis elegans Hypothetical
protein C18H9.3 protein.
Length = 918
Score = 31.9 bits (69), Expect = 0.51
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Frame = +3
Query: 240 VDRTRKVDRTRKVDHTHRVEATRKVELTL-----QEERIPRVEHTRRADMRPLSLASNLH 404
+ +++V T+ +VEA +K E TL +EER +VE + A ++ ASN+
Sbjct: 715 ISTSKEVKHTKTAPWAAKVEAPQKSEKTLLEIQKEEERKFKVEQEKNAKLKAKEQASNIT 774
Query: 405 MAAQVTVNRA 434
AA + +++
Sbjct: 775 SAAAIAGDKS 784
>U80931-1|AAB37998.2| 343|Caenorhabditis elegans Hypothetical
protein T01B11.1 protein.
Length = 343
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +2
Query: 602 KVWVAQNPFMFWVAFIVLIV--CLIAMACCPDVRRKAPTNFIFLAIFTAA 745
K+W+ + FWV I +++ L+A A ++RK F+FL AA
Sbjct: 8 KLWMFISKCQFWVILITVLISLLLVAKAFYNLMKRKRSNYFVFLISIIAA 57
>AF039053-9|AAN84838.1| 131|Caenorhabditis elegans Hypothetical
protein C45H4.14b protein.
Length = 131
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/75 (18%), Positives = 36/75 (48%)
Frame = +3
Query: 252 RKVDRTRKVDHTHRVEATRKVELTLQEERIPRVEHTRRADMRPLSLASNLHMAAQVTVNR 431
+K+D +K + HR + R+ + +E+ + + + + + L + ++ R
Sbjct: 19 KKLDEKKKTEEKHRAKQERQAQKKGAKEQAKKEKAELKKEAKELLKKEKAEERKKESLKR 78
Query: 432 AISHRTTQSAKMAKS 476
+S ++ +AK AK+
Sbjct: 79 KLSEKSEPAAKKAKA 93
>AF039053-8|AAC25878.1| 178|Caenorhabditis elegans Hypothetical
protein C45H4.14a protein.
Length = 178
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/75 (18%), Positives = 36/75 (48%)
Frame = +3
Query: 252 RKVDRTRKVDHTHRVEATRKVELTLQEERIPRVEHTRRADMRPLSLASNLHMAAQVTVNR 431
+K+D +K + HR + R+ + +E+ + + + + + L + ++ R
Sbjct: 66 KKLDEKKKTEEKHRAKQERQAQKKGAKEQAKKEKAELKKEAKELLKKEKAEERKKESLKR 125
Query: 432 AISHRTTQSAKMAKS 476
+S ++ +AK AK+
Sbjct: 126 KLSEKSEPAAKKAKA 140
>Z79759-5|CAB02140.2| 409|Caenorhabditis elegans Hypothetical
protein ZK858.5 protein.
Length = 409
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 626 FMFWVAFIVLIVCLIAMACCPDVRRKAPT 712
F+FW + +++VC+I + C V K T
Sbjct: 210 FLFWSSLFLMLVCVILLGCSRKVADKQVT 238
>Z77657-1|CAB01144.1| 130|Caenorhabditis elegans Hypothetical
protein F08H9.2 protein.
Length = 130
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +3
Query: 159 TRRTNQITRACIRIKADRTLRAGRTRKVDRTRKVDRTRKV-DHTHRVEATRKV 314
T RTN +TR KA + R R+R R+R ++R R + R+V
Sbjct: 45 TTRTNSLTRRRSSTKAPSSARQSRSRSRSRSRSRSKSRSTSSRRSRSRSARRV 97
>Z68108-2|CAA92135.1| 406|Caenorhabditis elegans Hypothetical
protein T05A10.3 protein.
Length = 406
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Frame = +3
Query: 195 RIKADRTLRAGRTRKVDRTRKVDR-TRKVDHTHRVEATRK--VELTLQEERIPRVEHTRR 365
RI+ +R +++D R+++ + +++ R+E +K E+ QEE R+E RR
Sbjct: 232 RIEEERFRLEEEQKRLDEIRRLEEESLRLEEIRRIEEEKKRIEEIRRQEEEQQRIELERR 291
Query: 366 ADMRPL 383
+ R L
Sbjct: 292 EEERRL 297
>U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical protein
F42C5.10 protein.
Length = 1292
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/54 (24%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = -3
Query: 685 TARHRDETDYQHYEGHPEHEGILGHPD-FGRSVVQEQSDETHRHHQLTHQDRVH 527
T++H + +Y G H G + + + G+ V D+ H H+ H H
Sbjct: 896 TSQHSNAQEYSTVHGSQTHRGSVVYDEPHGQVVYDIPHDQEHHHYDTVHVQHHH 949
>AF039052-4|AAF98630.1| 981|Caenorhabditis elegans Proteasome
regulatory particle,non-atpase-like protein 1 protein.
Length = 981
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -2
Query: 251 GTVHLAGTPRPEGTVRLDSDTCSRNLVGPSSLVFP 147
G V++AGTP P GT + R+L G +S P
Sbjct: 651 GNVNVAGTPAPTGTPAVAPAAPRRDLPGAASAATP 685
>Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical
protein H13N06.5 protein.
Length = 462
Score = 28.3 bits (60), Expect = 6.3
Identities = 22/87 (25%), Positives = 32/87 (36%), Gaps = 4/87 (4%)
Frame = -3
Query: 709 RSFASHVGTARHRDETD-YQHYEGHPEHEGILGHPDFGRSVVQEQSDE---THRHHQLTH 542
++ A+ TA D + H GH G H G S +E+ H HH +H
Sbjct: 64 KAAAAEAATAAAHDHGHAHDHDHGHAHDHGH-AHDHHGHSHDEEEDHHHGHAHDHHGHSH 122
Query: 541 QDRVHLSDESPAYRFFSEIETLDFAIF 461
+D H A + E + F F
Sbjct: 123 EDHGHSHGAESAKQVGDEYQYTGFLSF 149
>U56963-2|AAB38119.2| 326|Caenorhabditis elegans Neuropeptide-like
protein protein16 protein.
Length = 326
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/66 (25%), Positives = 24/66 (36%)
Frame = -3
Query: 736 KDGQEYEVRRSFASHVGTARHRDETDYQHYEGHPEHEGILGHPDFGRSVVQEQSDETHRH 557
+D E++ R H + Q GHPEH V + + HRH
Sbjct: 174 EDHHEHQKRSEHVEHQAEMHEHQKRSTQEVSGHPEH----------HLVKRSGGEGGHRH 223
Query: 556 HQLTHQ 539
H+ T Q
Sbjct: 224 HRSTDQ 229
>U00065-8|AAL02473.1| 501|Caenorhabditis elegans Hypothetical
protein D1044.2b protein.
Length = 501
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +2
Query: 623 PFMFWVAFIVLIVCLIAMACCPDVRRKAPTNFIFLAIFTAA 745
P M +A++V++VC+ A+ CC RR + + A++ AA
Sbjct: 412 PVMIILAWLVILVCIGAVVCCK--RRNSRESSQLRAMYGAA 450
>U00065-7|AAL02474.1| 1090|Caenorhabditis elegans Hypothetical protein
D1044.2c protein.
Length = 1090
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +2
Query: 623 PFMFWVAFIVLIVCLIAMACCPDVRRKAPTNFIFLAIFTAA 745
P M +A++V++VC+ A+ CC RR + + A++ AA
Sbjct: 962 PVMIILAWLVILVCIGAVVCCK--RRNSRESSQLRAMYGAA 1000
>U00065-6|AAL02472.1| 1051|Caenorhabditis elegans Hypothetical protein
D1044.2a protein.
Length = 1051
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +2
Query: 623 PFMFWVAFIVLIVCLIAMACCPDVRRKAPTNFIFLAIFTAA 745
P M +A++V++VC+ A+ CC RR + + A++ AA
Sbjct: 962 PVMIILAWLVILVCIGAVVCCK--RRNSRESSQLRAMYGAA 1000
>L23648-7|AAA28031.2| 962|Caenorhabditis elegans Abnormal cell
lineage protein 36 protein.
Length = 962
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +1
Query: 589 PPTDQSLGGPKSLHVLGGLHSADSLSHRDGVLSRR 693
PPT S GG S V+G + + R VLSRR
Sbjct: 724 PPTSSSPGGIFSQRVMGAVAQEKGPAKRPSVLSRR 758
>AF408759-1|AAO27838.1| 279|Caenorhabditis elegans LIN-36 protein.
Length = 279
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +1
Query: 589 PPTDQSLGGPKSLHVLGGLHSADSLSHRDGVLSRR 693
PPT S GG S V+G + + R VLSRR
Sbjct: 41 PPTSSSPGGIFSQRVMGAVAQEKGPAKRPSVLSRR 75
>AF104917-1|AAD22772.1| 962|Caenorhabditis elegans LIN-36 protein.
Length = 962
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +1
Query: 589 PPTDQSLGGPKSLHVLGGLHSADSLSHRDGVLSRR 693
PPT S GG S V+G + + R VLSRR
Sbjct: 724 PPTSSSPGGIFSQRVMGAVAQEKGPAKRPSVLSRR 758
>Z83218-3|CAB05688.1| 330|Caenorhabditis elegans Hypothetical
protein C31A11.6 protein.
Length = 330
Score = 27.9 bits (59), Expect = 8.3
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = +2
Query: 530 YAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMFWVAFIVLIVCLIAMACCPDVRRKAP 709
Y I MC + V M F+ RPT V +F+ +F++LI+C + P + P
Sbjct: 96 YFIPMC-VSVLMTMNRFFIVIRPTDQRVFGQRRIFFYSFLILILC-FTLLLIPRL-SYCP 152
Query: 710 TNFI 721
NF+
Sbjct: 153 VNFL 156
>U88173-11|AAK21390.1| 329|Caenorhabditis elegans Hypothetical
protein F46F11.8 protein.
Length = 329
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +2
Query: 647 IVLIVCLIAMACCPDVRRKAPTNFIFLAIFTAAQN 751
++ I+C + AC PDV K+P + T QN
Sbjct: 261 LLKIICKLCNACFPDVFEKSPPAINTILAVTTPQN 295
>U18385-1|AAA62505.1| 276|Caenorhabditis elegans collagen protein.
Length = 276
Score = 27.9 bits (59), Expect = 8.3
Identities = 19/74 (25%), Positives = 30/74 (40%)
Frame = -3
Query: 739 RKDGQEYEVRRSFASHVGTARHRDETDYQHYEGHPEHEGILGHPDFGRSVVQEQSDETHR 560
+KD Q+++ A H+D+ + Q + H E + PD VQ+Q D
Sbjct: 85 QKDHQDFQDLLDQPEETEDADHQDQLEDQESKDHREMQEDQEPPD-----VQDQQDHVEN 139
Query: 559 HHQLTHQDRVHLSD 518
T QD + D
Sbjct: 140 QEPSTSQDSQDVQD 153
>AC006834-6|AAF40004.1| 233|Caenorhabditis elegans Hypothetical
protein ZK973.9 protein.
Length = 233
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -3
Query: 586 QEQSDETHRHHQLTHQDRVHLSD 518
Q ++DE +H QL H++ +HLS+
Sbjct: 32 QSRADEAIKHQQLLHRNLLHLSN 54
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,828,864
Number of Sequences: 27780
Number of extensions: 396228
Number of successful extensions: 1484
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1334
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1477
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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