Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30355
(759 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g14730.1 68417.m02265 transmembrane protein-related low simil... 55 4e-08
At1g03070.1 68414.m00281 expressed protein low similarity to N-m... 51 1e-06
At4g02690.1 68417.m00364 hypothetical protein low similarity to ... 49 3e-06
At4g15470.1 68417.m02364 expressed protein low similarity to N-m... 49 4e-06
At3g63310.1 68416.m07121 expressed protein low similarity to N-m... 48 9e-06
At2g16910.1 68415.m01948 basic helix-loop-helix (bHLH) family pr... 36 0.022
At4g36520.1 68417.m05185 trichohyalin-related low similarity to ... 33 0.27
At5g19520.1 68418.m02325 mechanosensitive ion channel domain-con... 32 0.36
At4g36970.1 68417.m05239 remorin family protein contains Pfam do... 32 0.36
At3g02050.1 68416.m00168 potassium transporter (KUP3) nearly ide... 31 0.63
At2g04620.1 68415.m00470 cation efflux family protein potential ... 31 0.63
At5g15300.1 68418.m01792 pentatricopeptide (PPR) repeat-containi... 30 1.9
At2g24070.1 68415.m02875 expressed protein contains Pfam domain,... 30 1.9
At5g23800.1 68418.m02794 agenet domain-containing protein contai... 29 2.5
At3g13772.1 68416.m01738 endomembrane protein 70, putative TM4 f... 29 3.4
At2g24170.1 68415.m02888 endomembrane protein 70, putative simil... 29 3.4
At1g76880.1 68414.m08946 trihelix DNA-binding protein, putative ... 29 3.4
At1g11310.1 68414.m01299 seven transmembrane MLO family protein ... 29 3.4
At1g76890.2 68414.m08948 trihelix DNA-binding protein / GT-2 fac... 29 4.4
At1g76890.1 68414.m08947 trihelix DNA-binding protein / GT-2 fac... 29 4.4
At1g75310.1 68414.m08748 DNAJ heat shock N-terminal domain-conta... 29 4.4
At2g42120.2 68415.m05210 DNA polymerase delta small subunit-rela... 28 5.9
At2g42120.1 68415.m05209 DNA polymerase delta small subunit-rela... 28 5.9
At5g10840.1 68418.m01259 endomembrane protein 70, putative TM4 f... 28 7.7
At1g77400.1 68414.m09013 expressed protein 28 7.7
>At4g14730.1 68417.m02265 transmembrane protein-related low
similarity to transmembrane protein OTMP [Ovis aries]
GI:9965379
Length = 235
Score = 55.2 bits (127), Expect = 4e-08
Identities = 30/84 (35%), Positives = 50/84 (59%)
Frame = +2
Query: 503 IRRAFIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMFWVAFIVLIVCLIAMAC 682
+R AFIRK+Y+IL QL+VT+G A+ + RP ++ + V F++L++ L+ +
Sbjct: 24 LRWAFIRKLYSILSLQLLVTVGVSAVVYFVRPIPEFITETHRGLAVFFVILLLPLLLLWP 83
Query: 683 CPDVRRKAPTNFIFLAIFTAAQNF 754
+K P N I L+IFT + +F
Sbjct: 84 LLAFEKKHPINCIVLSIFTLSISF 107
>At1g03070.1 68414.m00281 expressed protein low similarity to
N-methyl-D-aspartate receptor-associated protein
[Drosophila melanogaster] GI:567104; contains Pfam
profile PF01027: Uncharacterized protein family UPF0005
Length = 247
Score = 50.8 bits (116), Expect = 1e-06
Identities = 28/84 (33%), Positives = 44/84 (52%)
Frame = +2
Query: 503 IRRAFIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMFWVAFIVLIVCLIAMAC 682
+R FIRKVY+I+ QL+ T+ + ++ RP V+ A + +++I LI M
Sbjct: 34 LRWGFIRKVYSIIAFQLLATIAVASTVVFVRPIAVFFATTSAGLALWIVLIITPLIVMCP 93
Query: 683 CPDVRRKAPTNFIFLAIFTAAQNF 754
+K P N++ L IFT A F
Sbjct: 94 LYYYHQKHPVNYLLLGIFTVALAF 117
>At4g02690.1 68417.m00364 hypothetical protein low similarity to
N-methyl-D-aspartate receptor-associated protein
[Drosophila melanogaster] GI:567104, NMDA receptor
glutamate-binding subunit [Rattus sp.] GI:8248741;
contains Pfam profile PF01027: Uncharacterized protein
family UPF0005
Length = 248
Score = 49.2 bits (112), Expect = 3e-06
Identities = 27/85 (31%), Positives = 44/85 (51%)
Frame = +2
Query: 503 IRRAFIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMFWVAFIVLIVCLIAMAC 682
+R FIRKVY+I+ QL+ T+ A + RP ++ A + +++I LI +
Sbjct: 34 LRWGFIRKVYSIIAFQLLATVAVAATVVTVRPIALFFATTGLGLALYIVIIITPLIVLCP 93
Query: 683 CPDVRRKAPTNFIFLAIFTAAQNFL 757
+K P N++ L IFT A F+
Sbjct: 94 LYYYHQKHPVNYLLLGIFTLALAFV 118
>At4g15470.1 68417.m02364 expressed protein low similarity to
N-methyl-D-aspartate receptor-associated protein
[Drosophila melanogaster] GI:567104; contains Pfam
profile PF01027: Uncharacterized protein family UPF0005
Length = 256
Score = 48.8 bits (111), Expect = 4e-06
Identities = 32/100 (32%), Positives = 48/100 (48%)
Frame = +2
Query: 455 VGEDGEVKGFDFTEKSIRRAFIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMF 634
VGE G + E +R FIRKVY IL QL++T A+ + + P + +P
Sbjct: 29 VGEATLYPGLSYGENQLRWGFIRKVYGILSAQLLLTTLISAVVVLNPPVNDLLTGSP--- 85
Query: 635 WVAFIVLIVCLIAMACCPDVRRKAPTNFIFLAIFTAAQNF 754
+ + IV I + +K P N I LA+FT + +F
Sbjct: 86 GILLFLCIVPFILIWPLHIYHQKHPVNLILLALFTVSLSF 125
>At3g63310.1 68416.m07121 expressed protein low similarity to
N-methyl-D-aspartate receptor-associated protein
[Drosophila melanogaster] GI:567104; contains Pfam
profile PF01027: Uncharacterized protein family UPF0005
Length = 239
Score = 47.6 bits (108), Expect = 9e-06
Identities = 27/84 (32%), Positives = 43/84 (51%)
Frame = +2
Query: 503 IRRAFIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMFWVAFIVLIVCLIAMAC 682
+R +FIRKVY+I+ QL+VT+ A + V+ F + ++++ LI M
Sbjct: 25 LRWSFIRKVYSIISIQLLVTIAVAATVVKVHSISVFFTTTTAGFALYILLILTPLIVMCP 84
Query: 683 CPDVRRKAPTNFIFLAIFTAAQNF 754
+K P N++ L IFT A F
Sbjct: 85 LYYYHQKHPVNYLLLGIFTVALAF 108
>At2g16910.1 68415.m01948 basic helix-loop-helix (bHLH) family
protein
Length = 571
Score = 36.3 bits (80), Expect = 0.022
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -3
Query: 673 RDETDYQHYEGHPEHEGILGHPDFGRSVVQEQSDETHRHHQ 551
++E DYQHY+ H H G H F + QS H HHQ
Sbjct: 527 KNEVDYQHYDDHQHHNG--HHHPFDHQM--NQSAHHHHHHQ 563
>At4g36520.1 68417.m05185 trichohyalin-related low similarity to
SP|Q07283 Trichohyalin {Homo sapiens}
Length = 1400
Score = 32.7 bits (71), Expect = 0.27
Identities = 27/90 (30%), Positives = 41/90 (45%)
Frame = +3
Query: 195 RIKADRTLRAGRTRKVDRTRKVDRTRKVDHTHRVEATRKVELTLQEERIPRVEHTRRADM 374
R+K +R L + RKV+ R+ +R R+ D A + L ER+ + A+
Sbjct: 1137 RLKRERDLEMEQLRKVEEEREREREREKDRM----AFDQRALADARERLEKA----CAEA 1188
Query: 375 RPLSLASNLHMAAQVTVNRAISHRTTQSAK 464
R SL L M A++ RA R T A+
Sbjct: 1189 REKSLPDKLSMEARLRAERAAVERATSEAR 1218
>At5g19520.1 68418.m02325 mechanosensitive ion channel
domain-containing protein / MS ion channel
domain-containing protein contains Pfam profile PF00924:
Mechanosensitive ion channel
Length = 742
Score = 32.3 bits (70), Expect = 0.36
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +1
Query: 535 DPDVSADGDDGFHRSVPVPPTDQSLGGPKSLHVLGGLHSADSLSHRDGVLSRRETQSS 708
+P S D D G +S PVPP S+ P+ G +H + +G++ R+ S
Sbjct: 32 NPLASPDSDAGIEKSKPVPPI--SIPTPEIYKFSGSVHKPPKIPSPEGLVRRKSLSRS 87
>At4g36970.1 68417.m05239 remorin family protein contains Pfam
domain, PF03763: Remorin, C-terminal region
Length = 427
Score = 32.3 bits (70), Expect = 0.36
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Frame = +1
Query: 181 REHV-SESRRTVP--SGRGVPARWTVPARWTVPARWTIPTGWRLPARWSLPSRRSVS 342
R H+ S S T P SGR +P++W RW T P G L + S RR S
Sbjct: 49 RRHIGSSSALTTPFYSGRAIPSKWEDAERWICSPVSTYPQGVCLNSSVSSEQRRQKS 105
>At3g02050.1 68416.m00168 potassium transporter (KUP3) nearly
identical to potassium transporter KUP3p [Arabidopsis
thaliana] gi|6742169|gb|AAF19432; similar to tiny root
hair 1 protein [Arabidopsis thaliana]
gi|11181958|emb|CAC16137; KUP/HAK/KT Transporter family
member, PMID:11500563
Length = 789
Score = 31.5 bits (68), Expect = 0.63
Identities = 19/61 (31%), Positives = 28/61 (45%)
Frame = +2
Query: 488 FTEKSIRRAFIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMFWVAFIVLIVCL 667
FT SIR AF VY L+ Q M F++ L P + + +FW F++ +
Sbjct: 294 FTSVSIRVAFAVVVYPCLVVQYMGQAAFLSKNLGSIPNSFYDSVPDPVFWPVFVIATLAA 353
Query: 668 I 670
I
Sbjct: 354 I 354
>At2g04620.1 68415.m00470 cation efflux family protein potential
member of the cation diffusion facilitator (CDF) family,
or cation efflux (CE) family, see PMID:11500563
Length = 798
Score = 31.5 bits (68), Expect = 0.63
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = -3
Query: 676 HRDETDYQHYEGHPEHEGILGHPDFGRSVVQEQSDETHRHHQLTHQDRVHLSD 518
H++E +QH + H +HE H D + + D H H H++ H D
Sbjct: 565 HKNEEHHQHSDSH-KHEEHHQHSDSHKHEEHHEHDHHHHSHSHKHEECNHNHD 616
>At5g15300.1 68418.m01792 pentatricopeptide (PPR) repeat-containing
protein contains INTERPRO:IPR002885 PPR repeats
Length = 548
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +1
Query: 421 R*TGLYPTERLSRRRWRSQGFRFH*KIYTQGF 516
R T + + S+ WRS GF FH K+ GF
Sbjct: 112 RYTFTFVLKACSKLEWRSNGFAFHGKVVRHGF 143
>At2g24070.1 68415.m02875 expressed protein contains Pfam domain,
PF04484: Family of unknown function (DUF566)
Length = 609
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/51 (37%), Positives = 22/51 (43%)
Frame = +1
Query: 193 SESRRTVPSGRGVPARWTVPARWTVPARWTIPTGWRLPARWSLPSRRSVSP 345
S SR + S +R P+R P R P G R R S P R VSP
Sbjct: 310 SPSRSSFSSSSSSNSRGMSPSRGVSPMRGLSPVGNRSLVRSSTPPSRGVSP 360
>At5g23800.1 68418.m02794 agenet domain-containing protein contains
Pfam PF05641: Agenet domain
Length = 552
Score = 29.5 bits (63), Expect = 2.5
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = +3
Query: 186 ACIRIKADRTLRAGRTRKVDRTRKVDRTRKVDHTHRVEATRKV-EL-TLQEERIPRVEHT 359
A +RI TLR ++RK+D + + + +VE RK+ EL L EE + +
Sbjct: 459 AQLRINKLLTLRGMQSRKMDELKGAKKVTAEKESVKVENERKILELQRLNEEMAKEIAQS 518
Query: 360 RRADMRPLSLASNLHMAAQVTVN 428
+ + L N+ + Q T +
Sbjct: 519 MSCEGKILQQLDNMKLEFQATAS 541
>At3g13772.1 68416.m01738 endomembrane protein 70, putative TM4
family;
Length = 641
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/55 (23%), Positives = 32/55 (58%)
Frame = +2
Query: 515 FIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMFWVAFIVLIVCLIAMA 679
+++ V++IL+ ++ G + + L+ T +W+ Q ++F FIV ++ ++ A
Sbjct: 495 YMKPVFSILIGGIL-PFGAVFIELFFILTSIWLNQFYYIFGFLFIVFLILIVTCA 548
>At2g24170.1 68415.m02888 endomembrane protein 70, putative similar
to MURA transposase of maize Mutator transposon
Length = 637
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/55 (25%), Positives = 31/55 (56%)
Frame = +2
Query: 515 FIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMFWVAFIVLIVCLIAMA 679
++ +++IL+ ++ G + + L+ T +W+ Q ++F FIV I+ +I A
Sbjct: 491 YMNPIFSILIGGIL-PFGAVFIELFFILTSIWLHQFYYIFGFLFIVFIILIITCA 544
>At1g76880.1 68414.m08946 trihelix DNA-binding protein, putative
similar to DNA-binding protein DF1 [Pisum sativum]
GI:13646986
Length = 603
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = -3
Query: 586 QEQSDETHRHHQLTHQDRVHLSDESPAYRFFSEIETLD 473
+E+ + +++H+ T + R S E YRFF ++E L+
Sbjct: 111 KEKFENVYKYHKRTKEGRTGKS-EGKTYRFFDQLEALE 147
>At1g11310.1 68414.m01299 seven transmembrane MLO family protein /
MLO-like protein 2 (MLO2) idenctical to membrane protein
Mlo2 [Arabidopsis thaliana] gi|14091574|gb|AAK53795;
similar to Mlo [Hordeum vulgare subsp. vulgare]
gi|1877221|emb|CAB06083 SWISS-PROT:P93766
Length = 573
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/62 (32%), Positives = 24/62 (38%), Gaps = 2/62 (3%)
Frame = -3
Query: 649 YEGHPEHEGILGHPDFGRSVVQEQSDETHRHHQLTHQ--DRVHLSDESPAYRFFSEIETL 476
Y GH HE P+ Q Q ET HH L H+ + V S E P R +
Sbjct: 515 YSGHGHHEHQFWDPES-----QHQEAETSTHHSLAHESSEPVLASVELPPIRTSKSLRDF 569
Query: 475 DF 470
F
Sbjct: 570 SF 571
>At1g76890.2 68414.m08948 trihelix DNA-binding protein / GT-2 factor
(GT2) identical to GT2 factor [Arabidopsis thaliana]
GI:416490, GI:2664202 (DNA binding factor GT-2 from
Arabidopsis)
Length = 575
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = -3
Query: 586 QEQSDETHRHHQLTHQDRVHLSDESPAYRFFSEIETLD 473
+E+ + +++H+ T + R S E YRFF E+E +
Sbjct: 91 KEKFENVYKYHKRTKEGRTGKS-EGKTYRFFEELEAFE 127
>At1g76890.1 68414.m08947 trihelix DNA-binding protein / GT-2 factor
(GT2) identical to GT2 factor [Arabidopsis thaliana]
GI:416490, GI:2664202 (DNA binding factor GT-2 from
Arabidopsis)
Length = 498
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = -3
Query: 586 QEQSDETHRHHQLTHQDRVHLSDESPAYRFFSEIETLD 473
+E+ + +++H+ T + R S E YRFF E+E +
Sbjct: 14 KEKFENVYKYHKRTKEGRTGKS-EGKTYRFFEELEAFE 50
>At1g75310.1 68414.m08748 DNAJ heat shock N-terminal domain-containing
protein low similarity to SP|Q27974 Auxilin {Bos taurus};
contains Pfam profile PF00226: DnaJ domain
Length = 1448
Score = 28.7 bits (61), Expect = 4.4
Identities = 22/104 (21%), Positives = 48/104 (46%), Gaps = 5/104 (4%)
Frame = +3
Query: 201 KADRTLRAGRTRKVDRTRKVDRTRKV---DHTHRVEATRKVELTLQEERIPRVEHTRRAD 371
+ + + R+ + D T + + + +H +++ TR+ E ++ER+ VE R +
Sbjct: 1122 EGEESCRSSMEEEGDATSDISQNKAETVEEHLKKIDETREKERERKQERV-MVERAIR-E 1179
Query: 372 MRPLSLASNLHMAAQVTVN--RAISHRTTQSAKMAKSRVSISLK 497
R + A + A + + +A++HR K K V ++ K
Sbjct: 1180 ARERAFADAMERAGKTAMEKAKAVAHRREVPRKSEKGSVEVNDK 1223
>At2g42120.2 68415.m05210 DNA polymerase delta small subunit-related
similar to DNA polymerase delta small subunit SP:Q9LRE5
from [Oryza sativa]
Length = 440
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
Frame = -2
Query: 371 IRPAGMLHPGDTLLLE---GKLHLAGS-LHPVGMVHLAGTV 261
++P +HP D L+LE G++ LAGS L P +++ G V
Sbjct: 105 VKPHNFMHPDDNLILEDESGRVKLAGSALSPA--IYVTGVV 143
>At2g42120.1 68415.m05209 DNA polymerase delta small subunit-related
similar to DNA polymerase delta small subunit SP:Q9LRE5
from [Oryza sativa]
Length = 441
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
Frame = -2
Query: 371 IRPAGMLHPGDTLLLE---GKLHLAGS-LHPVGMVHLAGTV 261
++P +HP D L+LE G++ LAGS L P +++ G V
Sbjct: 106 VKPHNFMHPDDNLILEDESGRVKLAGSALSPA--IYVTGVV 144
>At5g10840.1 68418.m01259 endomembrane protein 70, putative TM4
family;
Length = 648
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/55 (21%), Positives = 31/55 (56%)
Frame = +2
Query: 515 FIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMFWVAFIVLIVCLIAMA 679
++ V++IL+ ++ G + + L+ T +W+ Q ++F F+V ++ ++ A
Sbjct: 502 YMNPVFSILIGGIL-PFGAVFIELFFILTSIWLNQFYYIFGFLFLVFVILIVTCA 555
>At1g77400.1 68414.m09013 expressed protein
Length = 232
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 313 WSLPSRRSVSPGWSIP 360
W++ SRRSVSP W P
Sbjct: 192 WTVSSRRSVSPRWESP 207
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,058,911
Number of Sequences: 28952
Number of extensions: 371525
Number of successful extensions: 1252
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1248
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1692519896
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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