Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30354
         (712 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    24   1.1  
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    23   3.2  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    23   3.2  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    22   4.3  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   9.9  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    21   9.9  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    21   9.9  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   9.9  

>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 21/60 (35%), Positives = 32/60 (53%)
 Frame = -2

Query: 696 VSLRFFSMNSIASSFIASSKYSTQLPDLPFLKKLFSPLEGLLYVEVFFMLSKLKCLASSA 517
           V L FF + +IASS   +SKY+T+  ++   + + S  + LL   V  +L K KC    A
Sbjct: 5   VPLLFFVI-AIASSLAENSKYTTKYDNVDLDEIIKS--DRLLKNYVNCLLEKGKCTPDGA 61


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
 Frame = -1

Query: 316 DLVREIAEELNSEM*R--HGHVSRVAGYVEYLCSIQQSWWQTRQ 191
           +L ++I + L +E  +    H   V   + +L   + SWWQ  Q
Sbjct: 58  ELKKDIPDALQNECAKCNEKHKEGVRKVIRHLIKNKPSWWQELQ 101


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 6/19 (31%), Positives = 14/19 (73%)
 Frame = +3

Query: 153 IYRHRDMLKVTYRCRVCHQ 209
           ++R +  ++V ++C VCH+
Sbjct: 184 VHRAKPPMRVLHQCPVCHK 202


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +3

Query: 654 KKKRWNSWKKILAT 695
           KK++WNS  KIL T
Sbjct: 371 KKQQWNSLIKILKT 384


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = -3

Query: 101 IAASFSQRQISVLRTQYKRIFY*GVEKLRPRN 6
           I+ +FSQ  + ++      +F   +E L+P N
Sbjct: 99  ISFNFSQGPVKIMLQNATDLFIKSLESLKPGN 130


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +2

Query: 287 KLFGYFSDEVTFKEFWD 337
           +L+G F+DE     FW+
Sbjct: 97  RLYGIFADESKCDVFWN 113


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +2

Query: 287 KLFGYFSDEVTFKEFWD 337
           +L+G F+DE     FW+
Sbjct: 97  RLYGIFADESKCDVFWN 113


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/37 (24%), Positives = 17/37 (45%)
 Frame = +2

Query: 293 FGYFSDEVTFKEFWDLFKRDLVLHTPIFSHVKEAWEK 403
           FG  S  + + +  DL+K+      P+  H +  W +
Sbjct: 271 FGCLSTRLFYYQLTDLYKKIKKAFPPLSLHGQLLWRE 307


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,424
Number of Sequences: 336
Number of extensions: 3292
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)