Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30353
         (734 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    23   1.9  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    23   1.9  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   5.9  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   7.8  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   7.8  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   7.8  

>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -2

Query: 496 TDGPSVFRNLYICCFFVCVFYW 431
           T  P +F NL +  + +CV  W
Sbjct: 165 TGTPIIFHNLTLITYSLCVISW 186


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -2

Query: 496 TDGPSVFRNLYICCFFVCVFYW 431
           T  P +F NL +  + +CV  W
Sbjct: 165 TGTPIIFHNLTLITYSLCVISW 186


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 11/67 (16%)
 Frame = -1

Query: 593 SIISKRFIVMNRWKA*KTKGRSSTELV----KYCSVDRR-SQCFSE------LVYMLFFC 447
           SII  RF+++NR+           ELV    K C +  R S+   +      L+ +L F 
Sbjct: 183 SIIRNRFVILNRYIEESISKYKHAELVMPLCKSCDLHHRLSKLIKQLNATYGLILLLMFT 242

Query: 446 MCFLLVV 426
             F+ +V
Sbjct: 243 SHFIFIV 249


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -3

Query: 732 KILDFLRSSRINITILC 682
           K+L + R S+ N+ +LC
Sbjct: 238 KVLGYQRHSKQNVALLC 254


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 471 TCIYAVFLYVFF 436
           TCIY   LY++F
Sbjct: 42  TCIYLTSLYIWF 53


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 471 TCIYAVFLYVFF 436
           TCIY   LY++F
Sbjct: 42  TCIYLTSLYIWF 53


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,425
Number of Sequences: 336
Number of extensions: 4757
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19675845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)