Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30352
         (744 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7SI75 Cluster: Prenylcystein carboxymethyl transferase...    36   0.80 
UniRef50_Q92I70 Cluster: Uncharacterized protein RC0550; n=6; Ri...    34   3.2  
UniRef50_Q9ZDC8 Cluster: Uncharacterized protein RP403; n=2; Ric...    34   3.2  
UniRef50_P32584 Cluster: Protein-S-isoprenylcysteine O-methyltra...    33   5.6  
UniRef50_Q0TSD0 Cluster: Putative uncharacterized protein; n=1; ...    33   9.8  

>UniRef50_Q7SI75 Cluster: Prenylcystein carboxymethyl transferase;
           n=6; Trichocomaceae|Rep: Prenylcystein carboxymethyl
           transferase - Emericella nidulans (Aspergillus nidulans)
          Length = 322

 Score = 36.3 bits (80), Expect = 0.80
 Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
 Frame = -1

Query: 501 LFSYLQYFVTASLLGNLLMLQVHYTL*LYSNDIQYSILRGHCDLKCLHEYLIFPH-ILFK 325
           LF +L+Y++TA+   N     +   L L SN   Y++      L+CL  Y+ FPH   FK
Sbjct: 118 LFHFLEYYITAA--HNTRYADISAFL-LSSNGWAYNVAHSSAALECLLGYVFFPHDSYFK 174

Query: 324 FSYS 313
           F+ S
Sbjct: 175 FTAS 178


>UniRef50_Q92I70 Cluster: Uncharacterized protein RC0550; n=6;
           Rickettsia|Rep: Uncharacterized protein RC0550 -
           Rickettsia conorii
          Length = 838

 Score = 34.3 bits (75), Expect = 3.2
 Identities = 13/33 (39%), Positives = 24/33 (72%)
 Frame = +3

Query: 219 FNDLKLNDIELHTIFC*NPLNWFRRLFKFIIYC 317
           FNDL +N+I++  I   N  N++++++KF+ YC
Sbjct: 106 FNDLIINNIDIKLIEVYNNSNYWQKIYKFLEYC 138


>UniRef50_Q9ZDC8 Cluster: Uncharacterized protein RP403; n=2;
           Rickettsia|Rep: Uncharacterized protein RP403 -
           Rickettsia prowazekii
          Length = 870

 Score = 34.3 bits (75), Expect = 3.2
 Identities = 13/33 (39%), Positives = 24/33 (72%)
 Frame = +3

Query: 219 FNDLKLNDIELHTIFC*NPLNWFRRLFKFIIYC 317
           FNDL +N+I++  I   N  N++++++KF+ YC
Sbjct: 106 FNDLIINNIDIKLIEVYNNSNYWQKIYKFLEYC 138


>UniRef50_P32584 Cluster: Protein-S-isoprenylcysteine
           O-methyltransferase; n=4; Saccharomycetaceae|Rep:
           Protein-S-isoprenylcysteine O-methyltransferase -
           Saccharomyces cerevisiae (Baker's yeast)
          Length = 239

 Score = 33.5 bits (73), Expect = 5.6
 Identities = 22/63 (34%), Positives = 31/63 (49%)
 Frame = -1

Query: 501 LFSYLQYFVTASLLGNLLMLQVHYTL*LYSNDIQYSILRGHCDLKCLHEYLIFPHILFKF 322
           LF +L+Y++TA        L+VH    L +N   Y        L+CL E  +FP +   F
Sbjct: 58  LFHFLEYYITAKYNP----LKVHSESFLLNNGKSYMAAHSFAILECLVESFLFPDLKI-F 112

Query: 321 SYS 313
           SYS
Sbjct: 113 SYS 115


>UniRef50_Q0TSD0 Cluster: Putative uncharacterized protein; n=1;
           Clostridium perfringens ATCC 13124|Rep: Putative
           uncharacterized protein - Clostridium perfringens
           (strain ATCC 13124 / NCTC 8237 / Type A)
          Length = 437

 Score = 32.7 bits (71), Expect = 9.8
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +2

Query: 467 DAVTKYCRYENNSNKYS*VVANIHYPYIEYDNKYNSYI 580
           D    Y +YEN   K   + ++  YP+I Y  K+N YI
Sbjct: 16  DVKKNYLKYENLIKKPKWIASHGFYPFIHYKIKFNKYI 53


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 706,929,673
Number of Sequences: 1657284
Number of extensions: 13830505
Number of successful extensions: 29361
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 28240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29346
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60911752460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)