Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30352
         (744 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    24   1.1  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   2.0  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    22   6.0  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    22   6.0  

>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -2

Query: 587 LLKCMNYIYYHTLCMGNEYWR 525
           LL  +N +Y  TLC    YWR
Sbjct: 103 LLFVINVLYVLTLCYAVYYWR 123


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +1

Query: 580 FKSGNFIVYLKHTYYYLITYVARLFIISCE 669
           F +G F    K+  + LI  VA  F+IS +
Sbjct: 735 FSAGGFFDIRKNLIFSLIANVAMYFVISVQ 764


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/19 (42%), Positives = 14/19 (73%), Gaps = 3/19 (15%)
 Frame = +1

Query: 595 FIVYLKHTYY---YLITYV 642
           + +Y++HTYY   Y IT++
Sbjct: 60  YSIYVRHTYYRRLYTITHL 78


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/19 (42%), Positives = 14/19 (73%), Gaps = 3/19 (15%)
 Frame = +1

Query: 595 FIVYLKHTYY---YLITYV 642
           + +Y++HTYY   Y IT++
Sbjct: 60  YSIYVRHTYYRRLYTITHL 78


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,792
Number of Sequences: 336
Number of extensions: 4107
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)