Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30352
         (744 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL110485-19|CAB60367.2|  529|Caenorhabditis elegans Hypothetical...    31   0.65 
U28941-6|AAC71101.2| 1788|Caenorhabditis elegans Hypothetical pr...    29   3.5  
AY314774-1|AAQ84881.1| 1757|Caenorhabditis elegans methuselah-li...    29   3.5  
Z75954-6|CAJ55257.1| 1145|Caenorhabditis elegans Hypothetical pr...    29   4.6  
Z75954-5|CAB00104.1| 1143|Caenorhabditis elegans Hypothetical pr...    29   4.6  
Z81485-5|CAB03976.1|  151|Caenorhabditis elegans Hypothetical pr...    28   8.0  

>AL110485-19|CAB60367.2|  529|Caenorhabditis elegans Hypothetical
           protein Y46G5A.24 protein.
          Length = 529

 Score = 31.5 bits (68), Expect = 0.65
 Identities = 13/48 (27%), Positives = 26/48 (54%)
 Frame = +2

Query: 473 VTKYCRYENNSNKYS*VVANIHYPYIEYDNKYNSYILRAVISLFTSNT 616
           V  YCR EN     + +++N+     +YD K+  Y+ R ++ +  S++
Sbjct: 320 VMDYCRIENAGKFDTLLISNMKTGEFQYDAKFLPYLTRVIVPMSVSSS 367


>U28941-6|AAC71101.2| 1788|Caenorhabditis elegans Hypothetical
           protein F31D5.5 protein.
          Length = 1788

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = +2

Query: 89  WRSQATAAVGAKTQMKAYSTEVTPRPLTMLTED-ELAMRE 205
           W + AT      T + A  T  TP+P T L ED  ++++E
Sbjct: 206 WWNAATGTTDKTTSVAAGGTTNTPKPFTFLLEDVNISLKE 245


>AY314774-1|AAQ84881.1| 1757|Caenorhabditis elegans methuselah-like
           protein MTH-1 protein.
          Length = 1757

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = +2

Query: 89  WRSQATAAVGAKTQMKAYSTEVTPRPLTMLTED-ELAMRE 205
           W + AT      T + A  T  TP+P T L ED  ++++E
Sbjct: 175 WWNAATGTTDKTTSVAAGGTTNTPKPFTFLLEDVNISLKE 214


>Z75954-6|CAJ55257.1| 1145|Caenorhabditis elegans Hypothetical
           protein F58H1.1b protein.
          Length = 1145

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
 Frame = +1

Query: 49  PITTRCWQQDFRTMEVPGNGCRW----SKDSDESIQHRS 153
           P  + C Q DFR M   G  C W     K +D+++ HR+
Sbjct: 379 PEPSVCCQFDFRRMPEGGKSCDWGIPPQKINDDNVAHRA 417


>Z75954-5|CAB00104.1| 1143|Caenorhabditis elegans Hypothetical
           protein F58H1.1a protein.
          Length = 1143

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
 Frame = +1

Query: 49  PITTRCWQQDFRTMEVPGNGCRW----SKDSDESIQHRS 153
           P  + C Q DFR M   G  C W     K +D+++ HR+
Sbjct: 377 PEPSVCCQFDFRRMPEGGKSCDWGIPPQKINDDNVAHRA 415


>Z81485-5|CAB03976.1|  151|Caenorhabditis elegans Hypothetical
           protein C49F5.5 protein.
          Length = 151

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -3

Query: 163 SWGYFCAVCFHLSLCSNGSRCL 98
           S G F     HL++C+NGS CL
Sbjct: 93  SCGLFKYTLSHLNMCTNGSHCL 114


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,742,796
Number of Sequences: 27780
Number of extensions: 348535
Number of successful extensions: 789
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 789
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)