Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30352
(744 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 27 0.19
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 27 0.19
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 27 0.19
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 27 0.19
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 26 0.43
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 26 0.43
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 24 1.7
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 24 1.7
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 24 1.7
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 24 1.7
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 24 1.7
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 24 1.7
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 24 1.7
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 24 1.7
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 24 1.7
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 23 2.3
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 22 7.0
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 22 7.0
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 22 7.0
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 21 9.2
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 21 9.2
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 9.2
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 27.1 bits (57), Expect = 0.19
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -1
Query: 447 MLQVHYTL*LYSNDIQYSILRGHCDLKCLHEYLIFP 340
++ VH+ L +Y N ++R H L C IFP
Sbjct: 159 LIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFP 194
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 27.1 bits (57), Expect = 0.19
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -1
Query: 447 MLQVHYTL*LYSNDIQYSILRGHCDLKCLHEYLIFP 340
++ VH+ L +Y N ++R H L C IFP
Sbjct: 159 LIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFP 194
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 27.1 bits (57), Expect = 0.19
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -1
Query: 447 MLQVHYTL*LYSNDIQYSILRGHCDLKCLHEYLIFP 340
++ VH+ L +Y N ++R H L C IFP
Sbjct: 210 LIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFP 245
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 27.1 bits (57), Expect = 0.19
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -1
Query: 447 MLQVHYTL*LYSNDIQYSILRGHCDLKCLHEYLIFP 340
++ VH+ L +Y N ++R H L C IFP
Sbjct: 159 LIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFP 194
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 25.8 bits (54), Expect = 0.43
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +2
Query: 488 RYENNSNKYS*VVANIHYPYIEYDNKYNS 574
R E +K + ++++ +Y Y Y+N YNS
Sbjct: 292 RTERERSKETKIISSNNYNYKNYNNNYNS 320
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 25.8 bits (54), Expect = 0.43
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +2
Query: 488 RYENNSNKYS*VVANIHYPYIEYDNKYNS 574
R E +K + ++++ +Y Y Y+N YNS
Sbjct: 303 RTERERSKETKIISSNNYNYKNYNNNYNS 331
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 23.8 bits (49), Expect = 1.7
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +2
Query: 446 ISKLPNSDAVTKYCRYENNSNKYS-*VVANIHY 541
IS L N+ + Y Y NN N Y+ + NI+Y
Sbjct: 82 ISSLSNNYNYSNYNNYNNNYNNYNKKLYYNINY 114
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 23.8 bits (49), Expect = 1.7
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +2
Query: 446 ISKLPNSDAVTKYCRYENNS--NKYS*VVANIHY 541
IS L N+ + Y Y NN+ N Y + NI+Y
Sbjct: 82 ISSLSNNYNYSNYNNYNNNNNYNNYKKLYYNINY 115
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.8 bits (49), Expect = 1.7
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +2
Query: 446 ISKLPNSDAVTKYCRYENNS--NKYS*VVANIHY 541
IS L N+ + Y Y NN+ N Y + NI+Y
Sbjct: 82 ISSLSNNYNYSNYNNYNNNNNYNNYKKLYYNINY 115
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.8 bits (49), Expect = 1.7
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +2
Query: 446 ISKLPNSDAVTKYCRYENNS--NKYS*VVANIHY 541
IS L N+ + Y Y NN+ N Y + NI+Y
Sbjct: 82 ISSLSNNYNYSNYNNYNNNNNYNNYKKLYYNINY 115
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.8 bits (49), Expect = 1.7
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +2
Query: 446 ISKLPNSDAVTKYCRYENNS--NKYS*VVANIHY 541
IS L N+ + Y Y NN+ N Y + NI+Y
Sbjct: 82 ISSLSNNYNYSNYNNYNNNNNYNNYKKLYYNINY 115
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.8 bits (49), Expect = 1.7
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +2
Query: 446 ISKLPNSDAVTKYCRYENNS--NKYS*VVANIHY 541
IS L N+ + Y Y NN+ N Y + NI+Y
Sbjct: 82 ISSLSNNYNYSNYNNYNNNNNYNNYKKLYYNINY 115
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.8 bits (49), Expect = 1.7
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +2
Query: 446 ISKLPNSDAVTKYCRYENNS--NKYS*VVANIHY 541
IS L N+ + Y Y NN+ N Y + NI+Y
Sbjct: 82 ISSLSNNYNYSNYNNYNNNNNYNNYKKLYYNINY 115
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.8 bits (49), Expect = 1.7
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +2
Query: 446 ISKLPNSDAVTKYCRYENNS--NKYS*VVANIHY 541
IS L N+ + Y Y NN+ N Y + NI+Y
Sbjct: 82 ISSLSNNYNYSNYNNYNNNNNYNNYKKLYYNINY 115
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 23.8 bits (49), Expect = 1.7
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +2
Query: 446 ISKLPNSDAVTKYCRYENNSNKYS 517
IS L N+ + Y Y NN N Y+
Sbjct: 315 ISSLSNNYKYSNYNNYNNNYNNYN 338
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 2.3
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +2
Query: 446 ISKLPNSDAVTKYCRYENNS--NKYS*VVANIHY 541
+S L N+ + Y Y NN+ N Y + NI+Y
Sbjct: 82 VSSLSNNYNYSNYNNYNNNNNYNNYKKLYYNINY 115
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 21.8 bits (44), Expect = 7.0
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = -1
Query: 522 TYEYLFELFSYLQYFVTASLLG 457
TY Y F Y+ F+T + G
Sbjct: 224 TYRYGFSFLLYVSGFITTEVAG 245
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 21.8 bits (44), Expect = 7.0
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = +1
Query: 49 PITTRCWQQDFR 84
P+ CW +DFR
Sbjct: 387 PVIYACWSRDFR 398
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.8 bits (44), Expect = 7.0
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +2
Query: 86 QWRSQATAAVGAKTQMKAYSTEVTPRPLTMLTEDELAMRETS 211
QWR A V KTQ++ Y E+ + +LA TS
Sbjct: 36 QWRKPKPAMVEEKTQLR-YLEELNALRTELGASTKLATDTTS 76
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 21.4 bits (43), Expect = 9.2
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = -1
Query: 435 HYTL*LYSNDIQYSILRGHCDLKCLHEYLIFPH 337
HY L LY + +++ L C +LI+PH
Sbjct: 141 HY-LWLYKDKTILYMVKLTLKLSCAMNFLIYPH 172
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.4 bits (43), Expect = 9.2
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -1
Query: 291 YETNSKDFNKRLYVIQY 241
Y N+ ++NK+LY Y
Sbjct: 104 YNYNNNNYNKKLYYKNY 120
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.4 bits (43), Expect = 9.2
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +2
Query: 497 NNSNKYS*VVANIHYPYIEYDNKYNS 574
+N+N Y N +Y Y+N YN+
Sbjct: 324 HNNNNYKYNYNNNNYNNNNYNNNYNN 349
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,641
Number of Sequences: 438
Number of extensions: 4811
Number of successful extensions: 27
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23266665
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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