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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30348
         (696 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0237 - 22235757-22236979,22238564-22238567                       30   1.5  
12_02_0512 - 19889845-19890468,19890958-19891413,19891727-19892215     30   2.0  
11_06_0511 - 24434007-24436814                                         29   2.7  
03_05_0489 - 24858483-24858637,24858811-24858921,24859013-248594...    29   2.7  
07_01_0464 - 3504264-3504475,3504842-3505031,3505310-3505408,350...    29   4.7  
12_02_0875 - 23920023-23920967,23921045-23921599,23921678-239220...    28   6.2  
07_01_0395 + 2985513-2986018,2986227-2986268,2986494-2986521           28   6.2  
07_01_0123 - 927691-929223,930050-930268                               28   6.2  
05_01_0152 + 1008642-1008719,1008797-1009300                           28   6.2  
04_04_1574 - 34536744-34537136,34541247-34541405,34541497-345424...    28   6.2  
03_01_0622 + 4578018-4578043,4578397-4578526,4578738-4578794,457...    28   6.2  
01_03_0050 + 11959421-11959736,11959892-11959960,11960641-119609...    28   6.2  
08_02_0545 + 18470313-18470669,18470901-18471095,18471183-184713...    28   8.1  
07_03_1415 + 26410999-26411148,26411228-26411290,26412623-264126...    28   8.1  
07_01_0171 - 1198403-1199059,1200022-1200258                           28   8.1  
03_05_0461 + 24549079-24550464                                         28   8.1  

>03_05_0237 - 22235757-22236979,22238564-22238567
          Length = 408

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 7/61 (11%)
 Frame = +2

Query: 53  KGLLLMDTTF--RDAHQSLLATR----VRTHDLLAVSPYVAHNFNNLYSLENWGGA-TFD 211
           +G +LMD     R  H + L T+    +R H +   +P + H F+ L  L  WGG  T+D
Sbjct: 316 QGNVLMDHALFLRLNHSACLPTQNLPGIRPHCIYFSAPVIIHAFDWLLGLRVWGGVRTYD 375

Query: 212 V 214
           V
Sbjct: 376 V 376


>12_02_0512 - 19889845-19890468,19890958-19891413,19891727-19892215
          Length = 522

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 20/88 (22%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
 Frame = -3

Query: 505 RNVARIRDGGLDDAACLRGCLHAQY-QVRQVVQRIENSEDVHSCLDGHVAELEDDVVGIV 329
           R V ++    L  A  ++   +A++ QV +++  +  +E     LD H+  L D ++G V
Sbjct: 137 REVRKLLMVELLSARRVKAAWYARHEQVEKLLSTLRRAEGKPVALDEHILSLSDGIIGTV 196

Query: 328 GVADRVRAAEQHLERNVRDQLPHVVETL 245
              +   + +    +N +  L  V+E L
Sbjct: 197 AFGNIYGSDKFSQNKNFQHALDDVMEML 224


>11_06_0511 - 24434007-24436814
          Length = 935

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 20/65 (30%), Positives = 30/65 (46%)
 Frame = -3

Query: 577  STGLHQIVGQLRVILQVVFSFAGVRNVARIRDGGLDDAACLRGCLHAQYQVRQVVQRIEN 398
            S  LH I G  +++ Q + SFA +R +      G+D+     G L    QV  VV +I  
Sbjct: 847  SLRLHNISGISKLVFQAINSFANLRTLLLHEIDGVDELEIPNGSL-GSLQVLHVV-KISQ 904

Query: 397  SEDVH 383
               +H
Sbjct: 905  LNSIH 909


>03_05_0489 -
           24858483-24858637,24858811-24858921,24859013-24859421,
           24859746-24859800,24860042-24860318,24860442-24860562,
           24860831-24861438,24861552-24861741
          Length = 641

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 15/34 (44%), Positives = 17/34 (50%)
 Frame = +1

Query: 16  WPRGLRQSGPAAQGSAPDGHDVPGRAPVAAGH*G 117
           W   L  SGPA   SA  G D+  +AP A G  G
Sbjct: 12  WATQLSASGPATAPSAGAGFDLNSQAPAAEGFPG 45


>07_01_0464 - 3504264-3504475,3504842-3505031,3505310-3505408,
            3505561-3505653,3505926-3506891,3507267-3507485,
            3508038-3508247,3508371-3508630,3508956-3510737,
            3510796-3511009
          Length = 1414

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 15/43 (34%), Positives = 19/43 (44%)
 Frame = +2

Query: 92   HQSLLATRVRTHDLLAVSPYVAHNFNNLYSLENWGGATFDVAL 220
            H  LL     T D   VSP + HNF       NWG  ++D  +
Sbjct: 948  HIELLVNAGITQD---VSPVIPHNFIEALKKYNWGAFSYDARI 987


>12_02_0875 -
           23920023-23920967,23921045-23921599,23921678-23922083,
           23922175-23922452
          Length = 727

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = +1

Query: 184 RELGRSYIRRGLEIPPRVSVGASPRHEAADPEHSVPDVAPRR 309
           RE+ +  I R + +      GA P   AADP    P V P+R
Sbjct: 686 REVAQGGILRAVAVAAAAHRGAPPEPRAADPASWPPLVVPQR 727


>07_01_0395 + 2985513-2986018,2986227-2986268,2986494-2986521
          Length = 191

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 17/41 (41%), Positives = 19/41 (46%)
 Frame = -3

Query: 571 GLHQIVGQLRVILQVVFSFAGVRNVARIRDGGLDDAACLRG 449
           G   IVG LR    V     GV +V     GG+D A C RG
Sbjct: 57  GDKSIVGGLRGGGSVARELGGVGSVVGFVGGGVDPAGCARG 97


>07_01_0123 - 927691-929223,930050-930268
          Length = 583

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -2

Query: 98  TGARPGTSCPSGADPCAAGPLWRRPR 21
           + A  G +  +G D C AG +WRR R
Sbjct: 24  SAAGDGAAKEAGGDSCGAGRIWRRRR 49


>05_01_0152 + 1008642-1008719,1008797-1009300
          Length = 193

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = -2

Query: 80  TSCPSGADPCAAGPLWRRPRGH 15
           T  P+G D  A G LWRRP G+
Sbjct: 96  TDAPAG-DEAATGELWRRPDGY 116


>04_04_1574 -
           34536744-34537136,34541247-34541405,34541497-34542411,
           34543642-34543731,34544324-34544390,34544483-34544676,
           34544770-34545510,34545596-34545661,34545783-34545908,
           34545978-34546073,34546153-34546521,34546602-34546724,
           34546802-34546906,34547394-34547531,34547665-34547760,
           34548018-34548275
          Length = 1311

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
 Frame = -3

Query: 433 YQVRQVVQRIENSEDVHSCLDGHVAELEDDVVG---IVGVADRVRAAEQHLERNVRDQLP 263
           YQ+  V ++ E  E V + ++   AE+ED  +    +V V D++   EQ    +++++LP
Sbjct: 85  YQILGVTEKAEKDEIVKAAMELKNAEIEDGYMAEALLVDVRDKL-LFEQEYAGSIKEKLP 143


>03_01_0622 +
           4578018-4578043,4578397-4578526,4578738-4578794,
           4579666-4579827
          Length = 124

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 15/62 (24%), Positives = 30/62 (48%)
 Frame = -3

Query: 400 NSEDVHSCLDGHVAELEDDVVGIVGVADRVRAAEQHLERNVRDQLPHVVETLPRTLVEES 221
           +S ++   +D   A+L+D +VG+ G   ++R   Q ++   + Q    +  L  TL +  
Sbjct: 21  SSSEISLQIDPITADLDDHIVGLRGQVRKLRGVAQEIQTEAKYQ-NDFISQLQMTLTKAQ 79

Query: 220 QG 215
            G
Sbjct: 80  AG 81


>01_03_0050 +
           11959421-11959736,11959892-11959960,11960641-11960979,
           11961090-11961152,11962472-11962962,11963773-11964441
          Length = 648

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
 Frame = -3

Query: 142 DGEQVVGPH--PSGQQRLVRVPERRVH 68
           D EQ  G    P G+QRLV +PER VH
Sbjct: 38  DEEQQEGEDTAPCGEQRLVLLPERSVH 64


>08_02_0545 +
           18470313-18470669,18470901-18471095,18471183-18471362,
           18471462-18471656,18472081-18472179,18472271-18472780,
           18472896-18473225
          Length = 621

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
 Frame = -3

Query: 424 RQVVQ-RIENSEDVHSCLDGHVAELEDDVVGIVGVADRVRAAEQHLE--RNVRDQLPHVV 254
           RQ V+ +I+  ED    +DG +A L+DD+       D+   A   L   R++ +   H  
Sbjct: 257 RQAVRDKIKVLEDQIHAVDGEIAALQDDLTAATARKDKAFEALNELRKTRDLNNTSFHQY 316

Query: 253 ETLPRTLVE-ESQGHVE 206
            T+  ++ +  ++G VE
Sbjct: 317 RTISNSVRDLSARGEVE 333


>07_03_1415 +
           26410999-26411148,26411228-26411290,26412623-26412694,
           26412798-26412905,26413023-26413103,26413176-26413229,
           26413282-26413315,26413405-26413451,26413538-26413747,
           26413861-26413962,26414240-26414356,26414460-26414531,
           26414645-26414719,26414866-26414970
          Length = 429

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +1

Query: 541 HEAGRRSGEGRYSRARYQRHGRTAEAPGCEVAD 639
           +E GR  GEG + + +  RH  T  A   ++ D
Sbjct: 6   YEMGRALGEGHFGKVKLARHADTGAAFAIKILD 38


>07_01_0171 - 1198403-1199059,1200022-1200258
          Length = 297

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 17/65 (26%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
 Frame = -3

Query: 403 ENSEDVHSCLDGHVAELEDDVVGIVGVADRVRAAEQHLE--RNVRDQLPHVVETLPRTLV 230
           E  E V    DG   E E++V  +VG+++ + + E+ L   ++++ Q  +  ET+  + +
Sbjct: 38  EGGEAVKRLCDGEEGEEEEEVESLVGISNALESLERQLASLQDLQHQQRYERETI-LSQI 96

Query: 229 EESQG 215
           + S+G
Sbjct: 97  DRSRG 101


>03_05_0461 + 24549079-24550464
          Length = 461

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = +1

Query: 196 RSYIRRGLEIPPRVSVGASPRHEAA 270
           R+ +RR LE PP  + G SP H+AA
Sbjct: 367 RNIVRRPLEFPPDAAGGGSP-HDAA 390


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,829,239
Number of Sequences: 37544
Number of extensions: 320400
Number of successful extensions: 1305
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1305
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1780264028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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