BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= maV30348 (696 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 03_05_0237 - 22235757-22236979,22238564-22238567 30 1.5 12_02_0512 - 19889845-19890468,19890958-19891413,19891727-19892215 30 2.0 11_06_0511 - 24434007-24436814 29 2.7 03_05_0489 - 24858483-24858637,24858811-24858921,24859013-248594... 29 2.7 07_01_0464 - 3504264-3504475,3504842-3505031,3505310-3505408,350... 29 4.7 12_02_0875 - 23920023-23920967,23921045-23921599,23921678-239220... 28 6.2 07_01_0395 + 2985513-2986018,2986227-2986268,2986494-2986521 28 6.2 07_01_0123 - 927691-929223,930050-930268 28 6.2 05_01_0152 + 1008642-1008719,1008797-1009300 28 6.2 04_04_1574 - 34536744-34537136,34541247-34541405,34541497-345424... 28 6.2 03_01_0622 + 4578018-4578043,4578397-4578526,4578738-4578794,457... 28 6.2 01_03_0050 + 11959421-11959736,11959892-11959960,11960641-119609... 28 6.2 08_02_0545 + 18470313-18470669,18470901-18471095,18471183-184713... 28 8.1 07_03_1415 + 26410999-26411148,26411228-26411290,26412623-264126... 28 8.1 07_01_0171 - 1198403-1199059,1200022-1200258 28 8.1 03_05_0461 + 24549079-24550464 28 8.1 >03_05_0237 - 22235757-22236979,22238564-22238567 Length = 408 Score = 30.3 bits (65), Expect = 1.5 Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 7/61 (11%) Frame = +2 Query: 53 KGLLLMDTTF--RDAHQSLLATR----VRTHDLLAVSPYVAHNFNNLYSLENWGGA-TFD 211 +G +LMD R H + L T+ +R H + +P + H F+ L L WGG T+D Sbjct: 316 QGNVLMDHALFLRLNHSACLPTQNLPGIRPHCIYFSAPVIIHAFDWLLGLRVWGGVRTYD 375 Query: 212 V 214 V Sbjct: 376 V 376 >12_02_0512 - 19889845-19890468,19890958-19891413,19891727-19892215 Length = 522 Score = 29.9 bits (64), Expect = 2.0 Identities = 20/88 (22%), Positives = 41/88 (46%), Gaps = 1/88 (1%) Frame = -3 Query: 505 RNVARIRDGGLDDAACLRGCLHAQY-QVRQVVQRIENSEDVHSCLDGHVAELEDDVVGIV 329 R V ++ L A ++ +A++ QV +++ + +E LD H+ L D ++G V Sbjct: 137 REVRKLLMVELLSARRVKAAWYARHEQVEKLLSTLRRAEGKPVALDEHILSLSDGIIGTV 196 Query: 328 GVADRVRAAEQHLERNVRDQLPHVVETL 245 + + + +N + L V+E L Sbjct: 197 AFGNIYGSDKFSQNKNFQHALDDVMEML 224 >11_06_0511 - 24434007-24436814 Length = 935 Score = 29.5 bits (63), Expect = 2.7 Identities = 20/65 (30%), Positives = 30/65 (46%) Frame = -3 Query: 577 STGLHQIVGQLRVILQVVFSFAGVRNVARIRDGGLDDAACLRGCLHAQYQVRQVVQRIEN 398 S LH I G +++ Q + SFA +R + G+D+ G L QV VV +I Sbjct: 847 SLRLHNISGISKLVFQAINSFANLRTLLLHEIDGVDELEIPNGSL-GSLQVLHVV-KISQ 904 Query: 397 SEDVH 383 +H Sbjct: 905 LNSIH 909 >03_05_0489 - 24858483-24858637,24858811-24858921,24859013-24859421, 24859746-24859800,24860042-24860318,24860442-24860562, 24860831-24861438,24861552-24861741 Length = 641 Score = 29.5 bits (63), Expect = 2.7 Identities = 15/34 (44%), Positives = 17/34 (50%) Frame = +1 Query: 16 WPRGLRQSGPAAQGSAPDGHDVPGRAPVAAGH*G 117 W L SGPA SA G D+ +AP A G G Sbjct: 12 WATQLSASGPATAPSAGAGFDLNSQAPAAEGFPG 45 >07_01_0464 - 3504264-3504475,3504842-3505031,3505310-3505408, 3505561-3505653,3505926-3506891,3507267-3507485, 3508038-3508247,3508371-3508630,3508956-3510737, 3510796-3511009 Length = 1414 Score = 28.7 bits (61), Expect = 4.7 Identities = 15/43 (34%), Positives = 19/43 (44%) Frame = +2 Query: 92 HQSLLATRVRTHDLLAVSPYVAHNFNNLYSLENWGGATFDVAL 220 H LL T D VSP + HNF NWG ++D + Sbjct: 948 HIELLVNAGITQD---VSPVIPHNFIEALKKYNWGAFSYDARI 987 >12_02_0875 - 23920023-23920967,23921045-23921599,23921678-23922083, 23922175-23922452 Length = 727 Score = 28.3 bits (60), Expect = 6.2 Identities = 15/42 (35%), Positives = 20/42 (47%) Frame = +1 Query: 184 RELGRSYIRRGLEIPPRVSVGASPRHEAADPEHSVPDVAPRR 309 RE+ + I R + + GA P AADP P V P+R Sbjct: 686 REVAQGGILRAVAVAAAAHRGAPPEPRAADPASWPPLVVPQR 727 >07_01_0395 + 2985513-2986018,2986227-2986268,2986494-2986521 Length = 191 Score = 28.3 bits (60), Expect = 6.2 Identities = 17/41 (41%), Positives = 19/41 (46%) Frame = -3 Query: 571 GLHQIVGQLRVILQVVFSFAGVRNVARIRDGGLDDAACLRG 449 G IVG LR V GV +V GG+D A C RG Sbjct: 57 GDKSIVGGLRGGGSVARELGGVGSVVGFVGGGVDPAGCARG 97 >07_01_0123 - 927691-929223,930050-930268 Length = 583 Score = 28.3 bits (60), Expect = 6.2 Identities = 11/26 (42%), Positives = 15/26 (57%) Frame = -2 Query: 98 TGARPGTSCPSGADPCAAGPLWRRPR 21 + A G + +G D C AG +WRR R Sbjct: 24 SAAGDGAAKEAGGDSCGAGRIWRRRR 49 >05_01_0152 + 1008642-1008719,1008797-1009300 Length = 193 Score = 28.3 bits (60), Expect = 6.2 Identities = 12/22 (54%), Positives = 14/22 (63%) Frame = -2 Query: 80 TSCPSGADPCAAGPLWRRPRGH 15 T P+G D A G LWRRP G+ Sbjct: 96 TDAPAG-DEAATGELWRRPDGY 116 >04_04_1574 - 34536744-34537136,34541247-34541405,34541497-34542411, 34543642-34543731,34544324-34544390,34544483-34544676, 34544770-34545510,34545596-34545661,34545783-34545908, 34545978-34546073,34546153-34546521,34546602-34546724, 34546802-34546906,34547394-34547531,34547665-34547760, 34548018-34548275 Length = 1311 Score = 28.3 bits (60), Expect = 6.2 Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 3/60 (5%) Frame = -3 Query: 433 YQVRQVVQRIENSEDVHSCLDGHVAELEDDVVG---IVGVADRVRAAEQHLERNVRDQLP 263 YQ+ V ++ E E V + ++ AE+ED + +V V D++ EQ +++++LP Sbjct: 85 YQILGVTEKAEKDEIVKAAMELKNAEIEDGYMAEALLVDVRDKL-LFEQEYAGSIKEKLP 143 >03_01_0622 + 4578018-4578043,4578397-4578526,4578738-4578794, 4579666-4579827 Length = 124 Score = 28.3 bits (60), Expect = 6.2 Identities = 15/62 (24%), Positives = 30/62 (48%) Frame = -3 Query: 400 NSEDVHSCLDGHVAELEDDVVGIVGVADRVRAAEQHLERNVRDQLPHVVETLPRTLVEES 221 +S ++ +D A+L+D +VG+ G ++R Q ++ + Q + L TL + Sbjct: 21 SSSEISLQIDPITADLDDHIVGLRGQVRKLRGVAQEIQTEAKYQ-NDFISQLQMTLTKAQ 79 Query: 220 QG 215 G Sbjct: 80 AG 81 >01_03_0050 + 11959421-11959736,11959892-11959960,11960641-11960979, 11961090-11961152,11962472-11962962,11963773-11964441 Length = 648 Score = 28.3 bits (60), Expect = 6.2 Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 2/27 (7%) Frame = -3 Query: 142 DGEQVVGPH--PSGQQRLVRVPERRVH 68 D EQ G P G+QRLV +PER VH Sbjct: 38 DEEQQEGEDTAPCGEQRLVLLPERSVH 64 >08_02_0545 + 18470313-18470669,18470901-18471095,18471183-18471362, 18471462-18471656,18472081-18472179,18472271-18472780, 18472896-18473225 Length = 621 Score = 27.9 bits (59), Expect = 8.1 Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 4/77 (5%) Frame = -3 Query: 424 RQVVQ-RIENSEDVHSCLDGHVAELEDDVVGIVGVADRVRAAEQHLE--RNVRDQLPHVV 254 RQ V+ +I+ ED +DG +A L+DD+ D+ A L R++ + H Sbjct: 257 RQAVRDKIKVLEDQIHAVDGEIAALQDDLTAATARKDKAFEALNELRKTRDLNNTSFHQY 316 Query: 253 ETLPRTLVE-ESQGHVE 206 T+ ++ + ++G VE Sbjct: 317 RTISNSVRDLSARGEVE 333 >07_03_1415 + 26410999-26411148,26411228-26411290,26412623-26412694, 26412798-26412905,26413023-26413103,26413176-26413229, 26413282-26413315,26413405-26413451,26413538-26413747, 26413861-26413962,26414240-26414356,26414460-26414531, 26414645-26414719,26414866-26414970 Length = 429 Score = 27.9 bits (59), Expect = 8.1 Identities = 11/33 (33%), Positives = 17/33 (51%) Frame = +1 Query: 541 HEAGRRSGEGRYSRARYQRHGRTAEAPGCEVAD 639 +E GR GEG + + + RH T A ++ D Sbjct: 6 YEMGRALGEGHFGKVKLARHADTGAAFAIKILD 38 >07_01_0171 - 1198403-1199059,1200022-1200258 Length = 297 Score = 27.9 bits (59), Expect = 8.1 Identities = 17/65 (26%), Positives = 36/65 (55%), Gaps = 2/65 (3%) Frame = -3 Query: 403 ENSEDVHSCLDGHVAELEDDVVGIVGVADRVRAAEQHLE--RNVRDQLPHVVETLPRTLV 230 E E V DG E E++V +VG+++ + + E+ L ++++ Q + ET+ + + Sbjct: 38 EGGEAVKRLCDGEEGEEEEEVESLVGISNALESLERQLASLQDLQHQQRYERETI-LSQI 96 Query: 229 EESQG 215 + S+G Sbjct: 97 DRSRG 101 >03_05_0461 + 24549079-24550464 Length = 461 Score = 27.9 bits (59), Expect = 8.1 Identities = 13/25 (52%), Positives = 17/25 (68%) Frame = +1 Query: 196 RSYIRRGLEIPPRVSVGASPRHEAA 270 R+ +RR LE PP + G SP H+AA Sbjct: 367 RNIVRRPLEFPPDAAGGGSP-HDAA 390 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,829,239 Number of Sequences: 37544 Number of extensions: 320400 Number of successful extensions: 1305 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 1273 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1305 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1780264028 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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