Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30348
         (696 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81052-1|CAB02872.1| 1175|Caenorhabditis elegans Hypothetical pr...   300   7e-82
AF237467-1|AAF60326.1| 1175|Caenorhabditis elegans pyruvate carb...   300   7e-82
U00067-10|ABD94100.1|  247|Caenorhabditis elegans Hypothetical p...    29   3.2  
U00067-9|AAK20073.1|  364|Caenorhabditis elegans Hypothetical pr...    29   3.2  
U49829-6|AAA93387.1|  498|Caenorhabditis elegans Hypothetical pr...    28   7.3  

>Z81052-1|CAB02872.1| 1175|Caenorhabditis elegans Hypothetical protein
            D2023.2 protein.
          Length = 1175

 Score =  300 bits (736), Expect = 7e-82
 Identities = 137/217 (63%), Positives = 168/217 (77%)
 Frame = +2

Query: 2    ILDEGGPEAFAKAVRQHKGLLLMDTTFRDAHQSLLATRVRTHDLLAVSPYVAHNFNNLYS 181
            +L + GP  FAK VR   G ++ DTTFRDAHQSLLATRVRT+D+ A+SP+VA +FN L+S
Sbjct: 540  VLVQRGPTEFAKEVRSRPGCMITDTTFRDAHQSLLATRVRTYDMAAISPFVAQSFNGLFS 599

Query: 182  LENWGGATFDVALRFLHECPWERLHDMRQLIPNIPFQMLLRGANAVGYTNYPDNVVFKFC 361
            LENWGGATFDV++RFLHECPWERL  +R+LIPNIPFQ LLRGANA+GY+NYPDNV++KFC
Sbjct: 600  LENWGGATFDVSMRFLHECPWERLQTLRKLIPNIPFQCLLRGANAMGYSNYPDNVIYKFC 659

Query: 362  DMAVQAGMDIFRVFDSLNYLPNLVLGMXXXXXXXXXXXXXISYTGDVSDPSXXXXXXXXX 541
            ++AV+ GMD+FRVFDSLNYLPNL++GM             I+YTGDV+D S         
Sbjct: 660  ELAVKNGMDVFRVFDSLNYLPNLLVGMEAVGKAGGVVEAAIAYTGDVTDKSRDKYDLKYY 719

Query: 542  XXXXXXXVKAGTHVLAIKDMAGLLKPQAAKLLIGAIR 652
                   VKA  H+L+IKDMAG+LKP+AAKLLIGA+R
Sbjct: 720  LNLADQLVKAQAHILSIKDMAGVLKPEAAKLLIGALR 756


>AF237467-1|AAF60326.1| 1175|Caenorhabditis elegans pyruvate
            carboxylase protein.
          Length = 1175

 Score =  300 bits (736), Expect = 7e-82
 Identities = 137/217 (63%), Positives = 168/217 (77%)
 Frame = +2

Query: 2    ILDEGGPEAFAKAVRQHKGLLLMDTTFRDAHQSLLATRVRTHDLLAVSPYVAHNFNNLYS 181
            +L + GP  FAK VR   G ++ DTTFRDAHQSLLATRVRT+D+ A+SP+VA +FN L+S
Sbjct: 540  VLVQRGPTEFAKEVRSRPGCMITDTTFRDAHQSLLATRVRTYDMAAISPFVAQSFNGLFS 599

Query: 182  LENWGGATFDVALRFLHECPWERLHDMRQLIPNIPFQMLLRGANAVGYTNYPDNVVFKFC 361
            LENWGGATFDV++RFLHECPWERL  +R+LIPNIPFQ LLRGANA+GY+NYPDNV++KFC
Sbjct: 600  LENWGGATFDVSMRFLHECPWERLQTLRKLIPNIPFQCLLRGANAMGYSNYPDNVIYKFC 659

Query: 362  DMAVQAGMDIFRVFDSLNYLPNLVLGMXXXXXXXXXXXXXISYTGDVSDPSXXXXXXXXX 541
            ++AV+ GMD+FRVFDSLNYLPNL++GM             I+YTGDV+D S         
Sbjct: 660  ELAVKNGMDVFRVFDSLNYLPNLLVGMEAVGKAGGVVEAAIAYTGDVTDKSRDKYDLKYY 719

Query: 542  XXXXXXXVKAGTHVLAIKDMAGLLKPQAAKLLIGAIR 652
                   VKA  H+L+IKDMAG+LKP+AAKLLIGA+R
Sbjct: 720  LNLADQLVKAQAHILSIKDMAGVLKPEAAKLLIGALR 756


>U00067-10|ABD94100.1|  247|Caenorhabditis elegans Hypothetical
           protein F54E7.1b protein.
          Length = 247

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 314 AVGYTNYPDNVVFKFCDM 367
           +VGY NYP  V+FK C +
Sbjct: 7   SVGYLNYPTQVIFKCCKL 24


>U00067-9|AAK20073.1|  364|Caenorhabditis elegans Hypothetical
           protein F54E7.1a protein.
          Length = 364

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 314 AVGYTNYPDNVVFKFCDM 367
           +VGY NYP  V+FK C +
Sbjct: 124 SVGYLNYPTQVIFKCCKL 141


>U49829-6|AAA93387.1|  498|Caenorhabditis elegans Hypothetical
           protein F27D9.2 protein.
          Length = 498

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = -3

Query: 592 DSEHVSTGLHQIVGQLRVILQVVFSFAGVRNVARIR 485
           +S  ++ G+H + G +   + + F F GVR   + R
Sbjct: 303 ESVSINAGVHTVAGSIAAFMFICFIFTGVRRYMKNR 338


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,884,135
Number of Sequences: 27780
Number of extensions: 235825
Number of successful extensions: 893
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 807
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 889
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)