Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30346
(741 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1102 - 23981362-23982219 34 0.10
06_03_1403 + 29923503-29923821,29924269-29924405,29924495-299246... 33 0.31
01_05_0160 + 18751512-18751960,18752082-18752553 31 0.96
03_03_0042 + 14009649-14009866,14011342-14011419,14011791-140119... 31 1.3
09_06_0351 + 22466160-22466217,22466514-22467052,22467186-224672... 30 1.7
05_05_0155 + 22787658-22787930,22788029-22788096,22789600-227899... 30 1.7
03_02_0402 - 8151448-8151669,8151916-8152417,8154537-8155105 30 1.7
11_04_0418 - 17443989-17444082,17445153-17445406,17445709-174457... 30 2.2
11_04_0320 + 16354122-16354226,16354652-16356859 30 2.2
10_08_0683 - 19860777-19861070,19861677-19861874,19862498-198626... 30 2.2
01_01_1067 + 8403584-8404195,8404532-8404693,8404837-8405346,840... 30 2.2
05_07_0200 - 28368890-28369021,28369169-28369303,28369918-283699... 26 2.7
12_02_1280 - 27517683-27517871,27517955-27518029,27518155-275183... 29 2.9
03_05_1040 + 29883071-29883212,29883372-29883439,29883504-29883806 29 3.9
06_01_1007 + 7846266-7846526,7848368-7848420,7849231-7849432,784... 29 5.1
05_04_0356 - 20584212-20584628,20584798-20584899,20585658-205857... 29 5.1
03_06_0770 + 36146919-36147761 29 5.1
03_02_0846 + 11712530-11712740,11713974-11714055,11714127-117142... 29 5.1
12_01_0368 + 2815424-2815658,2816898-2817120,2818329-2818680,281... 28 6.8
11_01_0345 + 2579602-2579836,2581262-2581484,2582822-2583173,258... 28 6.8
06_03_0867 + 25534760-25539620,25540662-25540857,25540957-255411... 28 6.8
06_03_0706 + 23719392-23719641,23720337-23720383,23720988-237210... 28 6.8
05_01_0536 - 4622767-4622865,4623550-4623673,4624571-4624685,462... 28 6.8
04_04_0951 + 29614196-29615275 28 6.8
04_04_0938 - 29525604-29526182 28 6.8
03_05_0919 - 28792790-28792915,28793090-28793155,28794345-287945... 28 6.8
03_02_0709 + 10583621-10583626,10583711-10584712,10585304-10585669 28 6.8
02_05_0211 - 26800089-26800439,26800458-26800649,26800721-268007... 28 6.8
02_01_0035 - 220036-221419,222050-222801 28 6.8
04_01_0354 - 4646826-4647314 24 8.6
12_02_0667 + 21682386-21682944,21683042-21683201,21683419-216834... 28 9.0
11_06_0676 + 26152192-26152367,26152669-26152708,26152857-261529... 28 9.0
11_04_0425 - 17522818-17522822,17522860-17522971,17523267-17523584 28 9.0
10_05_0101 - 9167383-9167679,9167883-9167961,9168161-9168326,916... 28 9.0
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 28 9.0
09_04_0402 - 17304828-17305622 28 9.0
07_01_1122 - 10359014-10359127,10359686-10359769,10360375-10361331 28 9.0
06_03_0049 + 15961706-15962017,15962952-15963851,15964769-159649... 28 9.0
01_05_0369 - 21468204-21468595,21471417-21471606,21471680-214718... 28 9.0
>07_03_1102 - 23981362-23982219
Length = 285
Score = 34.3 bits (75), Expect = 0.10
Identities = 21/57 (36%), Positives = 29/57 (50%)
Frame = +2
Query: 83 KGSPSEHHAEHPSPD*ARQHPRPRRSPNHDVRPAHTVGPEGQVLRRHPRQ*DDIPPP 253
K + S+H A HP P +Q +PRRS + + AH P Q+ R PR+ PP
Sbjct: 113 KSASSDHSAAHPPP---QQQQQPRRSLSSSLFYAHP-SPSPQLRTRPPRRSTGSAPP 165
>06_03_1403 +
29923503-29923821,29924269-29924405,29924495-29924647,
29924690-29925280,29925523-29925597,29925901-29926169,
29927238-29927331
Length = 545
Score = 32.7 bits (71), Expect = 0.31
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +1
Query: 76 SSKGVALRTPR*ASLSRLGASTPPPPPFAQSRC 174
SS G+A R P S SR GA++PPP F C
Sbjct: 57 SSSGLAARVPEHRS-SRYGAASPPPSSFTDGSC 88
>01_05_0160 + 18751512-18751960,18752082-18752553
Length = 306
Score = 31.1 bits (67), Expect = 0.96
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = -2
Query: 170 RDWANGGGGGVDAPSRERDAQRGVRRATPF--EEHRCAFRGVD 48
RD GGGGG D A++ R+ P+ EEHR G+D
Sbjct: 115 RDERKGGGGGYDGGKSCSKAEQERRKGIPWTEEEHRLFLLGLD 157
>03_03_0042 +
14009649-14009866,14011342-14011419,14011791-14011955,
14012071-14012138,14012219-14012258,14013579-14013690,
14013859-14013942
Length = 254
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +2
Query: 74 ALQKGSPSEHHAEHPSPD*ARQHPRPRRSPNHDVRPAHTVGPEGQVLRRH 223
++ + S +H+ PSP AR+ R R D P ++ P GQ R H
Sbjct: 166 SVSRSPRSRYHSYSPSPSPARRDYRDHRD---DYSPGESLSPHGQDKRHH 212
>09_06_0351 +
22466160-22466217,22466514-22467052,22467186-22467293,
22467391-22467546,22467916-22468131,22468639-22468776,
22468880-22468981,22469089-22469146,22469346-22469408,
22469543-22469640
Length = 511
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +3
Query: 528 ISKYLQSASMRHFDKAARHENPLIVAAGNYIPDPADRMESSRRRPK-HVISDP 683
+S Y +S SM F +AR P++ ++ NY+ RRR + + SDP
Sbjct: 53 VSNYSRSTSMERFQLSARFHQPVVDSSTNYLTRWFYNANLKRRRIECFLTSDP 105
>05_05_0155 +
22787658-22787930,22788029-22788096,22789600-22789915,
22790207-22790323
Length = 257
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/60 (30%), Positives = 20/60 (33%), Gaps = 2/60 (3%)
Frame = +2
Query: 89 SPSEHHAEHPSPD*ARQHPRP--RRSPNHDVRPAHTVGPEGQVLRRHPRQ*DDIPPPH*D 262
+P H HP HP P P+H P H P HP P PH D
Sbjct: 25 APPPPHLRHPHHHPPHHHPHPPHHHPPHHPHPPHHPHPPHHPHPPHHPHPPHHHPHPHPD 84
>03_02_0402 - 8151448-8151669,8151916-8152417,8154537-8155105
Length = 430
Score = 30.3 bits (65), Expect = 1.7
Identities = 21/71 (29%), Positives = 28/71 (39%), Gaps = 5/71 (7%)
Frame = +2
Query: 56 HEKHSGALQKGSPSEHHAEHPSPD*ARQHPRPRRSPNHDVRPAHTVGPEGQ-----VLRR 220
H + A Q + H H P P P SP+H V A T P Q + R
Sbjct: 15 HRRRGSAAQGHGHHQVHGHHHQPSSPPPPPPPESSPSHYVFAAATPYPPPQYTNPNLPRY 74
Query: 221 HPRQ*DDIPPP 253
+P+ + PPP
Sbjct: 75 YPQYGNYYPPP 85
>11_04_0418 -
17443989-17444082,17445153-17445406,17445709-17445783,
17446156-17446377,17446789-17446941,17447031-17447167,
17447615-17447933
Length = 417
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +1
Query: 76 SSKGVALRTPR*ASLSRLGASTPPPPPFAQSRC 174
SS G+A R P S S GA++PPP F C
Sbjct: 57 SSSGLAARVPEHRS-SGYGAASPPPSSFTDGSC 88
>11_04_0320 + 16354122-16354226,16354652-16356859
Length = 770
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 158 NGGGGGVDAPSRERDAQRGVRRAT 87
NGGGGG++AP R D Q + T
Sbjct: 48 NGGGGGMEAPLRPLDVQEAMTMLT 71
>10_08_0683 -
19860777-19861070,19861677-19861874,19862498-19862659,
19862763-19862911,19863089-19863236,19863317-19863385,
19863471-19863719,19863937-19864131,19864444-19864560,
19864978-19866537
Length = 1046
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +2
Query: 2 RSYHHGTVVPEVAHRHQPHEKHSGALQKGSPSEHHAEHPSP 124
RS+H P + QP+ HS LQ P H +P P
Sbjct: 48 RSFHGYPSAPPPQPQPQPYAHHSAPLQPYPPPPQHHAYPPP 88
>01_01_1067 +
8403584-8404195,8404532-8404693,8404837-8405346,
8405434-8405493,8405721-8406137,8406576-8407100
Length = 761
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = +1
Query: 91 ALRTPR*ASLSRLGASTPPPPPFAQSRCSTSPYRG 195
ALR R S + A PPPPP AQ P RG
Sbjct: 3 ALRFVRGISPAASAAPQPPPPPVAQRHHQQQPSRG 37
>05_07_0200 -
28368890-28369021,28369169-28369303,28369918-28369947,
28370019-28370093,28370222-28370333,28370440-28370621,
28370723-28370854,28372193-28373479
Length = 694
Score = 25.8 bits (54), Expect(2) = 2.7
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +1
Query: 73 CSSKGVALRTPR*ASLSRLGASTPPPPP 156
CSS A R+ R LS+L PPPPP
Sbjct: 287 CSSDTAASRS-RLPELSKLPPIPPPPPP 313
Score = 22.2 bits (45), Expect(2) = 2.7
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +1
Query: 133 ASTPPPPPFAQSRCSTS 183
A PPPPP A+ TS
Sbjct: 341 APPPPPPPAAKRTSRTS 357
>12_02_1280 -
27517683-27517871,27517955-27518029,27518155-27518318,
27518424-27518538,27518783-27519074,27519162-27519318,
27519438-27519510,27520309-27520377,27520471-27520694,
27520800-27520981,27521067-27522064,27522335-27522580
Length = 927
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +2
Query: 41 HRHQ-PHEKHSGALQKGSPSEHHAEHPSPD*ARQHPRPR 154
HR P + HS + SPS HH+ S D AR H R R
Sbjct: 161 HRKSYPKDSHSKEQSRRSPSRHHS---SQDHARHHSRSR 196
>03_05_1040 + 29883071-29883212,29883372-29883439,29883504-29883806
Length = 170
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 63 STAVLFKRGRPPNTTLSIPLPTRR 134
S FKRG PP + +PLP R+
Sbjct: 118 SNGYAFKRGNPPEGIVEVPLPPRQ 141
>06_01_1007 +
7846266-7846526,7848368-7848420,7849231-7849432,
7849526-7849609,7850005-7850188,7850605-7850741,
7850875-7850939,7851093-7851762
Length = 551
Score = 28.7 bits (61), Expect = 5.1
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
Frame = -2
Query: 281 GGTVAYRLNVGAECHPTVEGDA*VLDLRG-----PRYGLVEHRDWANGGGGG 141
GG A + GA+ H VL LR P + +V+ R WA+GGGGG
Sbjct: 397 GGRPAAYVVSGAQLHVKAHESTSVLHLRLLYTELPGHSVVQSR-WAHGGGGG 447
>05_04_0356 -
20584212-20584628,20584798-20584899,20585658-20585705,
20586046-20586186,20586315-20586437,20587166-20587252,
20587630-20587742,20587844-20587943,20588217-20588601,
20588841-20588917,20589501-20589593,20589697-20589774,
20590923-20591246
Length = 695
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 127 LGASTPPPPPFAQSRCSTSPYRG 195
LGA+ PPPPP A ++ + +P G
Sbjct: 82 LGAALPPPPPAAAAQPAVAPLPG 104
>03_06_0770 + 36146919-36147761
Length = 280
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -3
Query: 202 FGAHGMGWSNIVIGRTAGAGVLTRLVGRGML 110
+ HG G + + G +AGAGV+ +VG +L
Sbjct: 141 YARHGGGANELAAGYSAGAGVVAEMVGTFVL 171
>03_02_0846 +
11712530-11712740,11713974-11714055,11714127-11714226,
11714311-11714406,11714492-11714542,11714685-11714750,
11715413-11715514,11716099-11716167,11716251-11716334,
11716531-11716626,11717216-11717268,11718808-11718945,
11719003-11719435
Length = 526
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +1
Query: 121 SRLGASTPPPPPFAQSRCSTSPY 189
S A+ PPPPP AQ + PY
Sbjct: 3 SAASAAAPPPPPTAQPHMAAPPY 25
>12_01_0368 +
2815424-2815658,2816898-2817120,2818329-2818680,
2819354-2819620
Length = 358
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 199 GAHGMGWSNIVIGRTAGAGVLTRLV 125
G+ G GW + VIG A G+LT L+
Sbjct: 283 GSSGWGWVSNVIGAGASLGILTSLM 307
>11_01_0345 +
2579602-2579836,2581262-2581484,2582822-2583173,
2583894-2584125,2584683-2585266
Length = 541
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 199 GAHGMGWSNIVIGRTAGAGVLTRLV 125
G+ G GW + VIG A G+LT L+
Sbjct: 283 GSSGWGWVSNVIGAGASLGILTSLM 307
>06_03_0867 +
25534760-25539620,25540662-25540857,25540957-25541104,
25541673-25541751,25542151-25542238,25542330-25542600,
25542676-25542718,25542801-25542904,25543374-25543790
Length = 2068
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/57 (28%), Positives = 22/57 (38%)
Frame = +2
Query: 11 HHGTVVPEVAHRHQPHEKHSGALQKGSPSEHHAEHPSPD*ARQHPRPRRSPNHDVRP 181
HH +P+ H H H H + HH + P+P P P P H + P
Sbjct: 54 HHQYHLPD--HHHHHHHHHPPPRVQHHHHHHHQQLPAP--TPPPPPPPPLPQHRLEP 106
>06_03_0706 +
23719392-23719641,23720337-23720383,23720988-23721060,
23721323-23721540,23721868-23722170,23722322-23722399,
23723064-23723549,23723875-23724312
Length = 630
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -2
Query: 176 EHRDWANGGG-GGVDAPSRERDAQRGVRRATPF 81
E D A G G GG PSR R +RG+ RA+P+
Sbjct: 18 EGEDAAGGYGVGGAGGPSR-RPPRRGLNRASPY 49
>05_01_0536 -
4622767-4622865,4623550-4623673,4624571-4624685,
4624784-4625028,4625081-4625316
Length = 272
Score = 28.3 bits (60), Expect = 6.8
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Frame = +3
Query: 444 QSRFCRIAV-GAPWFVRNVDLHDDLDLESISKYLQSASMRHFD--KAARHENPLI--VAA 608
+++F ++AV GAP ++R VDL + + LQ HF K E L+ V+
Sbjct: 118 KAKFVKVAVDGAP-YLRKVDLEAYRGYDQLLAALQDKFFSHFTIRKLGNEEMKLVDAVSG 176
Query: 609 GNYIPDPADR 638
Y+P D+
Sbjct: 177 NEYVPTYEDK 186
>04_04_0951 + 29614196-29615275
Length = 359
Score = 28.3 bits (60), Expect = 6.8
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +3
Query: 102 TTLSIPLPTRRVNTPAPAVRPITMFDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAA 281
TT S PL V P P++ I +QP P P+ + D +FR + +V +R+A
Sbjct: 162 TTPSCPLCRATVTLPHPSISAILAAEQPPPPEPRSR------DRSRSFRVEMGSVSNRSA 215
>04_04_0938 - 29525604-29526182
Length = 192
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -2
Query: 185 GLVEHRDWANGGGGGVDAPSRERDAQRGVRRATPFEEH 72
GLV + GGGG DA + + ++ V RA P E+
Sbjct: 46 GLVARCACSRRGGGGPDAAAANKGVKKSVLRAIPTVEY 83
>03_05_0919 -
28792790-28792915,28793090-28793155,28794345-28794530,
28794604-28795141,28795290-28795363
Length = 329
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -2
Query: 155 GGGGGVDAPSRERDAQRGVR 96
GGGGG D +R+ DA +G+R
Sbjct: 188 GGGGGGDGVARDDDAPKGLR 207
>03_02_0709 + 10583621-10583626,10583711-10584712,10585304-10585669
Length = 457
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = -2
Query: 167 DWANGGGGGVDAPSRERDAQRGVRRATPFEEHRCAFRGVDVDAPLPEPLSHGGSC 3
D GGGGG ++P+R A +++ P+ F + + L +PL SC
Sbjct: 57 DGGGGGGGGYNSPAR---ASSPLQKQIPYCRDAGDFSSLTWASTLEKPLESPSSC 108
>02_05_0211 -
26800089-26800439,26800458-26800649,26800721-26800792,
26800941-26801126
Length = 266
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -2
Query: 161 ANGGGGGVDAPSRERDAQRGVRRATPFEEHR 69
A GGGGG + P+ +Q G RRA+ E R
Sbjct: 214 AAGGGGGGEDPAVAEASQSGKRRASSSESGR 244
>02_01_0035 - 220036-221419,222050-222801
Length = 711
Score = 28.3 bits (60), Expect = 6.8
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +2
Query: 41 HRHQPHEKHSGALQKGSPSEHHAEHP 118
H HQ H++ + +P HH HP
Sbjct: 115 HHHQKHQQQPPPPARWAPQHHHHHHP 140
>04_01_0354 - 4646826-4647314
Length = 162
Score = 23.8 bits (49), Expect(2) = 8.6
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 103 PR*ASLSRLGASTPPPPP 156
PR L L S PPPPP
Sbjct: 81 PRPHPLPNLNLSPPPPPP 98
Score = 22.6 bits (46), Expect(2) = 8.6
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +1
Query: 142 PPPPPFAQSRC 174
PPPPP Q +C
Sbjct: 100 PPPPPQQQQQC 110
>12_02_0667 +
21682386-21682944,21683042-21683201,21683419-21683467,
21683570-21683683,21683794-21684294,21684594-21684980,
21685074-21685172,21685380-21685478,21685817-21685890,
21686387-21687023
Length = 892
Score = 27.9 bits (59), Expect = 9.0
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = -2
Query: 182 LVEHRDWANGGGGGVD--APSRERDAQRGVRRATPFEE 75
+ + NGGGGG A R D++ RR+T F+E
Sbjct: 1 MASREESGNGGGGGATPAADYRSSDSRSSSRRSTRFKE 38
>11_06_0676 +
26152192-26152367,26152669-26152708,26152857-26152966,
26153886-26153934,26154157-26154206,26154606-26155150,
26155583-26155743,26156231-26156440,26156525-26156690,
26156765-26156869,26157465-26157760
Length = 635
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -2
Query: 173 HRDWANGGGGGVDAPSRERDAQRGV 99
H D A GGGGGV +P +R + G+
Sbjct: 26 HVDAAAGGGGGVASPRGKRQLRSGM 50
>11_04_0425 - 17522818-17522822,17522860-17522971,17523267-17523584
Length = 144
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +2
Query: 146 RPRRSPNHDVRPAHTVGPEGQVLRRHPRQ 232
R R D RP H PE RR PR+
Sbjct: 62 RAARQHGEDRRPVHAGAPEADAARRSPRR 90
>10_05_0101 -
9167383-9167679,9167883-9167961,9168161-9168326,
9169201-9169299,9169969-9171361
Length = 677
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +2
Query: 350 TLQNLHTPRHDLCKCSVRSR 409
T+QNL+ PR DLC+ S S+
Sbjct: 5 TIQNLYAPRADLCEPSCSSK 24
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +1
Query: 97 RTPR*ASLSRLGASTPPPPPFAQSRCSTSP 186
RTP A+ S G PPPPP + + P
Sbjct: 677 RTPTGAATSSKGPPPPPPPPLPPANRTNGP 706
>09_04_0402 - 17304828-17305622
Length = 264
Score = 27.9 bits (59), Expect = 9.0
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +1
Query: 136 STPPPPPFAQSRCSTSP 186
+TPPPPP + STSP
Sbjct: 23 TTPPPPPLLSTSTSTSP 39
>07_01_1122 - 10359014-10359127,10359686-10359769,10360375-10361331
Length = 384
Score = 27.9 bits (59), Expect = 9.0
Identities = 16/36 (44%), Positives = 17/36 (47%)
Frame = +2
Query: 86 GSPSEHHAEHPSPD*ARQHPRPRRSPNHDVRPAHTV 193
G+ S HHA P RQ RPRR RP H V
Sbjct: 72 GALSTHHAAQPR----RQRSRPRRQRGGAGRPPHPV 103
>06_03_0049 +
15961706-15962017,15962952-15963851,15964769-15964913,
15964969-15965705
Length = 697
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -1
Query: 588 SRVVPLYRSGAWTPTADTY*WTLSPGRH 505
S +V +Y +G W PT D WT +P RH
Sbjct: 569 STLVQMYEAG-WAPTGDATGWTQAP-RH 594
>01_05_0369 -
21468204-21468595,21471417-21471606,21471680-21471867,
21484028-21484580
Length = 440
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -2
Query: 155 GGGGGVDAPSRERDAQRGVRRATPFEEHR 69
GGGG D P R + +G RR + + R
Sbjct: 312 GGGGAADRPGRRKGRPKGRRRRRGWRDRR 340
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,174,048
Number of Sequences: 37544
Number of extensions: 683032
Number of successful extensions: 3812
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 3261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3748
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1957111448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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