Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30346
         (741 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF043700-1|AAB97571.2|  328|Caenorhabditis elegans Hypothetical ...    40   0.002
U58738-4|AAB00604.1|  358|Caenorhabditis elegans Hypothetical pr...    38   0.006
AF036692-9|AAB88330.1|  389|Caenorhabditis elegans Hypothetical ...    38   0.007
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ...    34   0.092
U67948-3|AAM51499.1| 1077|Caenorhabditis elegans Hypothetical pr...    31   0.65 
AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical...    31   0.86 
Z83219-3|CAD57687.1|  965|Caenorhabditis elegans Hypothetical pr...    31   1.1  
Z74026-2|CAD54122.1|  588|Caenorhabditis elegans Hypothetical pr...    30   2.0  
U10438-9|AAU87834.1|  616|Caenorhabditis elegans Hypothetical pr...    30   2.0  
AL132948-1|CAC51077.1|  735|Caenorhabditis elegans Hypothetical ...    30   2.0  
Z81553-9|CAB04500.2|  663|Caenorhabditis elegans Hypothetical pr...    28   6.0  
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p...    28   6.0  
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr...    28   6.0  
AL132863-1|CAB60573.1|  477|Caenorhabditis elegans Hypothetical ...    28   6.0  
AC006834-6|AAF40004.1|  233|Caenorhabditis elegans Hypothetical ...    28   6.0  
U41553-1|AAA83291.1| 1250|Caenorhabditis elegans Hypothetical pr...    28   8.0  
U10402-8|AAA19070.2| 1024|Caenorhabditis elegans Hypothetical pr...    28   8.0  
AL034392-5|CAE17989.1|  134|Caenorhabditis elegans Hypothetical ...    28   8.0  
AF016419-3|AAG24048.1|  529|Caenorhabditis elegans Hypothetical ...    28   8.0  

>AF043700-1|AAB97571.2|  328|Caenorhabditis elegans Hypothetical
           protein K09H9.4 protein.
          Length = 328

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 25/93 (26%), Positives = 43/93 (46%)
 Frame = +3

Query: 183 PIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKT 362
           PI      + LG  +  ++ F  H K   + A F L  ++      +K  +   + LYKT
Sbjct: 140 PIERKTITRDLGFLISEKLDFSEHWKKSINLAKFQLANIFNQYSTSNKKLM---ILLYKT 196

Query: 363 CIRPVMTYASVVFAHAARIQLKSFQIIQSRFCR 461
            IRP + Y +VV +   +   K+ + +Q+ F R
Sbjct: 197 FIRPRLEYGTVVSSPTKKSDEKAIESVQNAFTR 229


>U58738-4|AAB00604.1|  358|Caenorhabditis elegans Hypothetical
           protein F31A9.6 protein.
          Length = 358

 Score = 38.3 bits (85), Expect = 0.006
 Identities = 24/93 (25%), Positives = 43/93 (46%)
 Frame = +3

Query: 183 PIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKT 362
           PI      + LG  +  ++ F  H +   + A F L  ++      +K  +   + LYKT
Sbjct: 170 PIERKAITRDLGFLISEKLDFSDHWRKCINLAKFQLANMFNKYSTSNKKLM---ILLYKT 226

Query: 363 CIRPVMTYASVVFAHAARIQLKSFQIIQSRFCR 461
            IRP + Y +VV +   +   K+ + +Q+ F R
Sbjct: 227 FIRPRLEYGTVVSSPTKKSDEKTIESVQNAFTR 259


>AF036692-9|AAB88330.1|  389|Caenorhabditis elegans Hypothetical
           protein C44B12.7 protein.
          Length = 389

 Score = 37.9 bits (84), Expect = 0.007
 Identities = 22/74 (29%), Positives = 38/74 (51%)
 Frame = +3

Query: 183 PIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKT 362
           PI  +   + LG+  DS++TF+PHIK +    +  L R   ++     +       L+KT
Sbjct: 188 PISPSNIARDLGILTDSKLTFKPHIKKI---VSLALLRCKQLLKSFKSLCPEFYCNLFKT 244

Query: 363 CIRPVMTYASVVFA 404
            I P++ Y S V++
Sbjct: 245 YILPLIEYGSAVYS 258


>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
            protein F21E9.1 protein.
          Length = 1170

 Score = 34.3 bits (75), Expect = 0.092
 Identities = 23/74 (31%), Positives = 36/74 (48%)
 Frame = +3

Query: 183  PIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKT 362
            PI  +  V+ LG+  D ++ F  HI  V   +   + R   ++   S  S +    LYKT
Sbjct: 969  PITPSSTVRDLGLITDCKLKFEHHIVKV---SCLAMLRSKQILKAFSSNSPKFYAHLYKT 1025

Query: 363  CIRPVMTYASVVFA 404
             + P+M Y S V+A
Sbjct: 1026 YVAPIMNYCSEVYA 1039


>U67948-3|AAM51499.1| 1077|Caenorhabditis elegans Hypothetical protein
            M02E1.1a protein.
          Length = 1077

 Score = 31.5 bits (68), Expect = 0.65
 Identities = 17/57 (29%), Positives = 26/57 (45%)
 Frame = +3

Query: 108  LSIPLPTRRVNTPAPAVRPITMFDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRA 278
            ++ PLP+     P+  VRP T FD  IP+     ++G     + T    +   R RA
Sbjct: 890  MATPLPSFNGRPPS-VVRPRTAFDMNIPYGTDSNFIGAKQFKKNTLSVEMTNARQRA 945


>AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical
           protein Y75B8A.13 protein.
          Length = 1420

 Score = 31.1 bits (67), Expect = 0.86
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = +3

Query: 81  KRGRPPNTTLSIPLPTRRVNTPAPAVRPITMFDQPIPWAP 200
           K  +PP   + +PLP RR +   P V P  +   P P  P
Sbjct: 233 KTTKPPQHLIILPLPPRRASPAPPRVIPHVIMQPPRPRPP 272


>Z83219-3|CAD57687.1|  965|Caenorhabditis elegans Hypothetical
           protein C31C9.6 protein.
          Length = 965

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 14/46 (30%), Positives = 20/46 (43%)
 Frame = +3

Query: 63  STAVLFKRGRPPNTTLSIPLPTRRVNTPAPAVRPITMFDQPIPWAP 200
           ST   +    PP T    P P  R+  P+P+ +P  +   P P  P
Sbjct: 449 STGTSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPP 494


>Z74026-2|CAD54122.1|  588|Caenorhabditis elegans Hypothetical
           protein B0240.4 protein.
          Length = 588

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 123 PTRRVNTPAPAVRPITMFDQPIPW 194
           P R V++P    +PIT+FDQ + W
Sbjct: 46  PNRTVSSPRVQQKPITIFDQIVDW 69


>U10438-9|AAU87834.1|  616|Caenorhabditis elegans Hypothetical
           protein B0280.13 protein.
          Length = 616

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 14/46 (30%), Positives = 20/46 (43%)
 Frame = +3

Query: 63  STAVLFKRGRPPNTTLSIPLPTRRVNTPAPAVRPITMFDQPIPWAP 200
           ST   +    PP T    P P  R+  P+P+ +P  +   P P  P
Sbjct: 456 STGPSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPP 501


>AL132948-1|CAC51077.1|  735|Caenorhabditis elegans Hypothetical
           protein Y39B6A.1 protein.
          Length = 735

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 19/60 (31%), Positives = 22/60 (36%), Gaps = 1/60 (1%)
 Frame = +2

Query: 11  HHGTVVPEVAHRHQP-HEKHSGALQKGSPSEHHAEHPSPD*ARQHPRPRRSPNHDVRPAH 187
           HHG       H H P H  H G  + G+   HH  H SP     H     +P H     H
Sbjct: 525 HHGH---HGEHHHAPAHHGHHG--EHGTHHGHHGSHHSPAHHGHHGEHHHAPAHHGHHGH 579



 Score = 29.1 bits (62), Expect = 3.5
 Identities = 18/54 (33%), Positives = 21/54 (38%), Gaps = 1/54 (1%)
 Frame = +2

Query: 11  HHGTVVPEVAHRHQP-HEKHSGALQKGSPSEHHAEHPSPD*ARQHPRPRRSPNH 169
           HHG       H H P H  H G  + G+   HH  H SP     H     +P H
Sbjct: 467 HHGH---HGEHHHAPAHHGHHG--EHGTHHGHHGSHHSPAHHGHHGEHHHAPAH 515


>Z81553-9|CAB04500.2|  663|Caenorhabditis elegans Hypothetical
           protein F56H6.11 protein.
          Length = 663

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = -3

Query: 139 LTRLVGRGMLSVVFGGRPLLKSTAVLFVGLMSMRHFRNHCPM 14
           LT  VG G+L ++    PLL +  + ++G +S   +  H P+
Sbjct: 275 LTATVGTGLLMLLSENNPLLSNKVLTYIGDISYSLYLVHWPI 316


>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
            protein 44, isoform f protein.
          Length = 6994

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +3

Query: 504  HDDLDLESISKYLQSASMRHFDKAARHENPLIVAAGNYI 620
            H D + E+ ++ + S   RH  +    E+P IV +G YI
Sbjct: 5374 HSDEEDENDAEVIDSEFYRHSQEQNNEEDPSIVESGEYI 5412


>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
            protein.
          Length = 6994

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +3

Query: 504  HDDLDLESISKYLQSASMRHFDKAARHENPLIVAAGNYI 620
            H D + E+ ++ + S   RH  +    E+P IV +G YI
Sbjct: 5374 HSDEEDENDAEVIDSEFYRHSQEQNNEEDPSIVESGEYI 5412


>AL132863-1|CAB60573.1|  477|Caenorhabditis elegans Hypothetical
           protein Y37H2A.1 protein.
          Length = 477

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = +2

Query: 29  PEVAHRHQPHEKHSGALQKGSPSEHHAEHPSPD*ARQHPRPRRS 160
           P V   HQ  + H+  L   +P+ HH+  P P   R+   P+ +
Sbjct: 68  PAVHQHHQMVQVHTRRLGGAAPTMHHSRPPPPPLDRRPMSPQNA 111


>AC006834-6|AAF40004.1|  233|Caenorhabditis elegans Hypothetical
           protein ZK973.9 protein.
          Length = 233

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 14/46 (30%), Positives = 19/46 (41%)
 Frame = +2

Query: 44  RHQPHEKHSGALQKGSPSEHHAEHPSPD*ARQHPRPRRSPNHDVRP 181
           +H P + H    Q+G P+ HH +   P  A   P     P H   P
Sbjct: 100 QHSPQQGHPHP-QQGLPAAHHRQQMMPPQAAPSPGGPMQPPHGFAP 144


>U41553-1|AAA83291.1| 1250|Caenorhabditis elegans Hypothetical protein
            ZK1193.2 protein.
          Length = 1250

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 14/44 (31%), Positives = 25/44 (56%)
 Frame = -2

Query: 686  GRIRDDVFWATSTAFHSVRRIGNVVTGGHDERVLVSCRFIEVAH 555
            G I D++++AT  A   V  IGN ++ GHD   ++   +  ++H
Sbjct: 1065 GSISDEMYYATVGA---VNTIGNAISIGHDHSRILLGTYDAISH 1105


>U10402-8|AAA19070.2| 1024|Caenorhabditis elegans Hypothetical
           protein C34E10.8 protein.
          Length = 1024

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
 Frame = +3

Query: 99  NTTLSIPLPTRRVNTPAPAVRPITMFDQP----IPWAPK 203
           + TL+ PLP R    PA  +RP  M   P    +P+ PK
Sbjct: 369 SNTLTAPLPRRYQGPPAQVLRPPQMGPPPGINQVPYQPK 407


>AL034392-5|CAE17989.1|  134|Caenorhabditis elegans Hypothetical
           protein Y40B1A.5 protein.
          Length = 134

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 627 PADRMESSRRRPKHVISDPPDP 692
           P     ++RRR +HV+S PP P
Sbjct: 4   PVVEFTTARRRKRHVVSTPPPP 25


>AF016419-3|AAG24048.1|  529|Caenorhabditis elegans Hypothetical
           protein F07G11.3 protein.
          Length = 529

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +3

Query: 117 PLPTRRVNTPAPAVRPITMFDQPIPWAPKVKYLG 218
           PLP   +N  +P VRP+  F     + P  K LG
Sbjct: 42  PLPPPTINIESPPVRPLKAFISSAYYYPTSKSLG 75


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,303,222
Number of Sequences: 27780
Number of extensions: 475465
Number of successful extensions: 1796
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1788
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)