Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30346
         (741 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.    27   0.24 
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    25   0.75 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   0.75 
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          24   1.7  
AF442147-1|AAL35348.1|   33|Apis mellifera abaecin precursor pro...    24   1.7  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   5.3  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   5.3  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    22   7.0  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    22   7.0  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   7.0  

>U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.
          Length = 53

 Score = 26.6 bits (56), Expect = 0.24
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +3

Query: 114 IPLPTRRVNTPAPAVRPITMFDQPIPWAPKVKY 212
           +PLP    N P P  RP   F    P+ PK+K+
Sbjct: 21  VPLP----NVPQPGRRPFPTFPGQGPFNPKIKW 49


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 25.0 bits (52), Expect = 0.75
 Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
 Frame = +2

Query: 5   SYHHGTVVPEVAHRHQPHEKHSGALQKGS-PSEHHAEHPSPD*ARQHPRPRRSPNHDV 175
           S+ H T     +H   PH +HS  L   S P+     H +P     HP P  +P   V
Sbjct: 424 SHIHATPHHHHSHAATPHHQHSTPLAHSSYPAAIQIGH-TP---HHHPHPPETPGPQV 477


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 25.0 bits (52), Expect = 0.75
 Identities = 13/55 (23%), Positives = 22/55 (40%)
 Frame = +2

Query: 17  GTVVPEVAHRHQPHEKHSGALQKGSPSEHHAEHPSPD*ARQHPRPRRSPNHDVRP 181
           G +  E   RH   + H   LQ  +  +HH  +      +Q  + +R     +RP
Sbjct: 131 GLIKQETLQRHHHLQNHHHHLQSTAVQDHHRPYQQQQ-QQQQRQQQRQEERRLRP 184


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -2

Query: 308 HRVETS*NEGGTVAYRLNVGAEC 240
           ++VET+    GT  +R+N+G EC
Sbjct: 452 NKVETT--HSGTSLFRINLGIEC 472


>AF442147-1|AAL35348.1|   33|Apis mellifera abaecin precursor
           protein.
          Length = 33

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +3

Query: 114 IPLPTRRVNTPAPAVRPITMFDQPIPWAPKV 206
           +PLP    N P P  RP   F    P+ PK+
Sbjct: 7   VPLP----NVPQPGRRPFPTFPGQGPFNPKI 33


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 8/30 (26%), Positives = 17/30 (56%)
 Frame = +3

Query: 24  WFRKWRIDINPTKSTAVLFKRGRPPNTTLS 113
           W +  +I++NP+ +  V  KR   P+  ++
Sbjct: 841 WLKGGKIELNPSTNYRVTVKREVTPDGVIA 870


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 8/30 (26%), Positives = 17/30 (56%)
 Frame = +3

Query: 24  WFRKWRIDINPTKSTAVLFKRGRPPNTTLS 113
           W +  +I++NP+ +  V  KR   P+  ++
Sbjct: 837 WLKGGKIELNPSTNYRVTVKREVTPDGVIA 866


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -2

Query: 197 GPRYGLVEHRDWANGGG 147
           GPR GL+    W  GGG
Sbjct: 152 GPRNGLLPLLVWIYGGG 168


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -2

Query: 197 GPRYGLVEHRDWANGGG 147
           GPR GL+    W  GGG
Sbjct: 152 GPRNGLLPLLVWIYGGG 168


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 18/59 (30%), Positives = 23/59 (38%), Gaps = 6/59 (10%)
 Frame = +2

Query: 5   SYHHGTVVPEVAHRHQ---PHEKHSGALQ---KGSPSEHHAEHPSPD*ARQHPRPRRSP 163
           SYH     P   H H+   PH +H         G P  HH  H +   + QH   R+ P
Sbjct: 315 SYHPHQHHPSQYHPHRGSSPHHQHGNHTMGPTMGPPHHHH-HHQTQ--SLQHLHYRQPP 370


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 236,680
Number of Sequences: 438
Number of extensions: 5565
Number of successful extensions: 16
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23144850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)