Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30345
         (716 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_16011| Best HMM Match : Sugar_tr (HMM E-Value=0)                    61   8e-10
SB_47688| Best HMM Match : ATP_synt_H (HMM E-Value=7)                  42   5e-04
SB_7879| Best HMM Match : Sugar_tr (HMM E-Value=0.03)                  33   0.23 
SB_745| Best HMM Match : Aa_trans (HMM E-Value=0.047)                  29   5.0  
SB_58068| Best HMM Match : 7tm_1 (HMM E-Value=0.0018)                  28   6.6  
SB_31763| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.6  
SB_37067| Best HMM Match : Mgm101p (HMM E-Value=2.94273e-44)           28   8.7  

>SB_16011| Best HMM Match : Sugar_tr (HMM E-Value=0)
          Length = 512

 Score = 61.3 bits (142), Expect = 8e-10
 Identities = 36/114 (31%), Positives = 59/114 (51%)
 Frame = -1

Query: 467 LAIGLFLHHFLYFIIGAGPMPLSGIITGEIFPLADRGLCSIISRITCSIYLFGDIKSAPY 288
           LAI   +   L F +  GP+P   ++  EIFPL  RG+ S IS +      F   K+   
Sbjct: 397 LAITSIVVFNLVFALAWGPVPW--LVMSEIFPLQARGIASSISTLCNWSLAFAVTKTFVN 454

Query: 287 LFTIVGVEGVFGLYGLILAYSLVVTLIYLPETKDRTLQEVEDGFRGYAIGEREE 126
           +   + ++G +  YG +     +  L+++PETK +TL+++E  F G  +  REE
Sbjct: 455 IEDAITIQGTYWFYGGLSFLGFLFVLMFVPETKGKTLEQIERLFDGTLVTPREE 508


>SB_47688| Best HMM Match : ATP_synt_H (HMM E-Value=7)
          Length = 124

 Score = 41.9 bits (94), Expect = 5e-04
 Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
 Frame = -1

Query: 401 SGIITGEIFPLADRGLC-SIISRITCSIYLFGDIKSAPYLFTIVGVEGVFGLYGLILAYS 225
           S ++  EIFP   +G   S+ + +     +F        L +I G  G F  YGLI   +
Sbjct: 2   SWLLLSEIFPSGIKGRAFSLATVLNWGTNVFVSFTFLDLLGSI-GTSGTFFFYGLICVIA 60

Query: 224 LVVTLIYLPETKDRTLQEV 168
           +V    Y+PETK++TL+++
Sbjct: 61  IVFIYKYVPETKNKTLEQI 79


>SB_7879| Best HMM Match : Sugar_tr (HMM E-Value=0.03)
          Length = 201

 Score = 33.1 bits (72), Expect = 0.23
 Identities = 13/36 (36%), Positives = 23/36 (63%)
 Frame = -1

Query: 257 FGLYGLILAYSLVVTLIYLPETKDRTLQEVEDGFRG 150
           F ++  ++A     T  ++PETK RT++++ D FRG
Sbjct: 145 FIVFMALVAIFWTFTFFFVPETKGRTIEDITDHFRG 180


>SB_745| Best HMM Match : Aa_trans (HMM E-Value=0.047)
          Length = 261

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 23/97 (23%), Positives = 44/97 (45%), Gaps = 5/97 (5%)
 Frame = -1

Query: 434 YFIIGAGPMPLSGIITGEIFPLADRGLCSIISRITCSIY-----LFGDIKSAPYLFTIVG 270
           +F+  A     +  + G+++P+    L +II+  T SI      + G +      FT+V 
Sbjct: 120 WFVWAASYFTAAKSLLGDLWPIPSVALIAIIALFTYSIAEVAPAIEGSMSDRSQ-FTVVI 178

Query: 269 VEGVFGLYGLILAYSLVVTLIYLPETKDRTLQEVEDG 159
           V        +  ++ LV  L+Y  +T+D  +  + DG
Sbjct: 179 VITYIIEATIKCSFGLVAVLVYSTDTQDVVINNLPDG 215


>SB_58068| Best HMM Match : 7tm_1 (HMM E-Value=0.0018)
          Length = 241

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = -2

Query: 265 KEFLVCMV*FLHIV-WS*L*FIYRKLKTELFKKSKMGLGDTLSANGRKR 122
           K F VCM  FL+ V  + +  +Y  +  +LFKK   G GD    N +KR
Sbjct: 33  KYFAVCMFVFLYAVPLALMAVLYSIICRKLFKKEMGGGGDEQINNKKKR 81


>SB_31763| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 396

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = -2

Query: 265 KEFLVCMV*FLHIV-WS*L*FIYRKLKTELFKKSKMGLGDTLSANGRKR 122
           K F VCM  FL+ V  + +  +Y  +  +LFKK   G GD    N +KR
Sbjct: 188 KYFAVCMFVFLYAVPLALMAVLYSIICRKLFKKEMGGGGDEQINNKKKR 236


>SB_37067| Best HMM Match : Mgm101p (HMM E-Value=2.94273e-44)
          Length = 319

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = -1

Query: 212 LIYLPETKDRTLQEVEDGFRGYAIGEREEALELK 111
           LIYLPE K R +  V  G  G+A+  R ++L+ +
Sbjct: 104 LIYLPEIKYRRILNVAFGPGGWALVPRGDSLQFQ 137


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,579,964
Number of Sequences: 59808
Number of extensions: 461511
Number of successful extensions: 910
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 910
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1901817086
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)