Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30340
(814 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF387862-2|AAL56548.1| 942|Anopheles gambiae pol polyprotein pr... 25 2.8
AF387858-1|AAL58708.1| 209|Anopheles gambiae integrase protein. 25 2.8
AF387857-1|AAL58707.1| 215|Anopheles gambiae integrase protein. 25 2.8
AF387850-1|AAL58705.1| 209|Anopheles gambiae integrase protein. 25 2.8
DQ396551-1|ABD60146.1| 354|Anopheles gambiae adipokinetic hormo... 25 3.7
AY298745-1|AAQ63187.1| 354|Anopheles gambiae G-protein coupled ... 25 3.7
AJ010299-1|CAA09070.1| 722|Anopheles gambiae stat protein. 24 4.8
DQ230894-1|ABD94313.1| 315|Anopheles gambiae zinc finger protei... 24 6.4
DQ230893-1|ABD94311.1| 315|Anopheles gambiae zinc finger protei... 24 6.4
DQ342048-1|ABC69940.1| 847|Anopheles gambiae STIP protein. 23 8.5
AB090818-1|BAC57911.1| 285|Anopheles gambiae gag-like protein p... 23 8.5
>AF387862-2|AAL56548.1| 942|Anopheles gambiae pol polyprotein
protein.
Length = 942
Score = 25.0 bits (52), Expect = 2.8
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +2
Query: 689 FDDAIAE-LDTLNEDSYKDSTLIMQLLRD-NLTLWTSDTQGDGD 814
FDD + + L++ EDS D TLI + L D + ++ S + DGD
Sbjct: 334 FDDDVGDRLESEEEDS-TDETLIEEELTDTDSSMCDSTNEDDGD 376
>AF387858-1|AAL58708.1| 209|Anopheles gambiae integrase protein.
Length = 209
Score = 25.0 bits (52), Expect = 2.8
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +2
Query: 689 FDDAIAE-LDTLNEDSYKDSTLIMQLLRD-NLTLWTSDTQGDGD 814
FDD + + L++ EDS D TLI + L D + ++ S + DGD
Sbjct: 104 FDDDVGDRLESEEEDS-TDETLIEEELTDTDSSMCDSTNEDDGD 146
>AF387857-1|AAL58707.1| 215|Anopheles gambiae integrase protein.
Length = 215
Score = 25.0 bits (52), Expect = 2.8
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +2
Query: 689 FDDAIAE-LDTLNEDSYKDSTLIMQLLRD-NLTLWTSDTQGDGD 814
FDD + + L++ EDS D TLI + L D + ++ S + DGD
Sbjct: 110 FDDDVGDRLESEEEDS-TDETLIEEELTDTDSSMCDSTNEDDGD 152
>AF387850-1|AAL58705.1| 209|Anopheles gambiae integrase protein.
Length = 209
Score = 25.0 bits (52), Expect = 2.8
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +2
Query: 689 FDDAIAE-LDTLNEDSYKDSTLIMQLLRD-NLTLWTSDTQGDGD 814
FDD + + L++ EDS D TLI + L D + ++ S + DGD
Sbjct: 104 FDDDVGDRLESEEEDS-TDETLIEEELTDTDSSMCDSTNEDDGD 146
>DQ396551-1|ABD60146.1| 354|Anopheles gambiae adipokinetic hormone
receptor protein.
Length = 354
Score = 24.6 bits (51), Expect = 3.7
Identities = 10/21 (47%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
Frame = +3
Query: 534 IHRKHTKMLLKSARRK-CSPH 593
+ +KHTK LLK+ K C H
Sbjct: 329 VRKKHTKKLLKTTHEKSCGSH 349
>AY298745-1|AAQ63187.1| 354|Anopheles gambiae G-protein coupled
receptor protein.
Length = 354
Score = 24.6 bits (51), Expect = 3.7
Identities = 10/21 (47%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
Frame = +3
Query: 534 IHRKHTKMLLKSARRK-CSPH 593
+ +KHTK LLK+ K C H
Sbjct: 329 VRKKHTKKLLKTTHEKSCGSH 349
>AJ010299-1|CAA09070.1| 722|Anopheles gambiae stat protein.
Length = 722
Score = 24.2 bits (50), Expect = 4.8
Identities = 15/58 (25%), Positives = 25/58 (43%)
Frame = +2
Query: 278 WRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKV 451
W+V+ ++ + K + + +V K C V L+D LI K NP+ V
Sbjct: 274 WKVMKDVKDFIKLLLHKAFIVENQPPQVMKMNTRFCASVRLLIDNALIMKIGNPKVTV 331
>DQ230894-1|ABD94313.1| 315|Anopheles gambiae zinc finger protein
183 protein.
Length = 315
Score = 23.8 bits (49), Expect = 6.4
Identities = 10/26 (38%), Positives = 11/26 (42%)
Frame = +1
Query: 166 HGGRDEGSDGNRRRT*QRGEEPPFSC 243
HGG D D + EE PF C
Sbjct: 222 HGGDDSDGDDTKYEIHSDDEELPFKC 247
>DQ230893-1|ABD94311.1| 315|Anopheles gambiae zinc finger protein
183 protein.
Length = 315
Score = 23.8 bits (49), Expect = 6.4
Identities = 10/26 (38%), Positives = 11/26 (42%)
Frame = +1
Query: 166 HGGRDEGSDGNRRRT*QRGEEPPFSC 243
HGG D D + EE PF C
Sbjct: 222 HGGDDSDGDDTKYEIHSDDEELPFKC 247
>DQ342048-1|ABC69940.1| 847|Anopheles gambiae STIP protein.
Length = 847
Score = 23.4 bits (48), Expect = 8.5
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 659 LANLISHNKRLRNLTPDPALWGVWA 585
LAN + N+ R T + ++GVWA
Sbjct: 16 LANEFNPNRGRRRPTKNQQIYGVWA 40
>AB090818-1|BAC57911.1| 285|Anopheles gambiae gag-like protein
protein.
Length = 285
Score = 23.4 bits (48), Expect = 8.5
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +3
Query: 90 RPRCPSTRKNWCNVP 134
RPR PS R N N+P
Sbjct: 126 RPRTPSMRVNCTNIP 140
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 823,962
Number of Sequences: 2352
Number of extensions: 17050
Number of successful extensions: 90
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 84
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 86
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86071221
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -