Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30338
(758 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L21936-1|AAA20683.1| 664|Homo sapiens succinate dehydrogenase f... 316 7e-86
D30648-1|BAA06332.1| 664|Homo sapiens flavoprotein subunit of c... 316 7e-86
BC001380-1|AAH01380.1| 664|Homo sapiens succinate dehydrogenase... 316 7e-86
AF171030-1|AAD51006.1| 664|Homo sapiens succinate dehydrogenase... 316 7e-86
AB208991-1|BAD92228.1| 670|Homo sapiens succinate dehydrogenase... 316 7e-86
DQ402982-1|ABD77315.1| 550|Homo sapiens succinate dehydrogenase... 300 4e-81
BC062438-1|AAH62438.1| 144|Homo sapiens SDHALP2 protein protein. 231 3e-60
BC053551-1|AAH53551.1| 148|Homo sapiens SDHALP2 protein protein. 227 3e-59
BC041016-1|AAH41016.1| 519|Homo sapiens SDHA protein protein. 105 2e-22
>L21936-1|AAA20683.1| 664|Homo sapiens succinate dehydrogenase
flavoprotein subunit protein.
Length = 664
Score = 316 bits (775), Expect = 7e-86
Identities = 149/235 (63%), Positives = 170/235 (72%)
Frame = +2
Query: 47 VRTESSIMSTLMKAAVSRSPASLASYLYRNIHVAASGATSKDASVTTNMTKAYTVIDHKH 226
VR S ++S A P L + R H G A V+ +++ Y V+DH+
Sbjct: 4 VRGLSRLLSARRLALAKAWPTVLQTGT-RGFHFTVDGNKRASAKVSDSISAQYPVVDHEF 62
Query: 227 DXXXXXXXXXXXXXXXXXVQEGFKTAVVTKLFPTRSHTVAAQGGINAALGNMEEDSWLWH 406
D + GF TA VTKLFPTRSHTVAAQGGINAALGNMEED+W WH
Sbjct: 63 DAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEEDNWRWH 122
Query: 407 MYDTVKGSDWLGDQDAIHYMTKEAPHAVIELDNYGMPFSRTPEGKIYQRAFGGQSLKFGK 586
YDTVKGSDWLGDQDAIHYMT++AP AV+EL+NYGMPFSRT +GKIYQRAFGGQSLKFGK
Sbjct: 123 FYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENYGMPFSRTEDGKIYQRAFGGQSLKFGK 182
Query: 587 GGQAHRCCAVADRTGHSLLHTLYGQSLRYDCEYFIEYFALDLLMEDGVCKGCIAI 751
GGQAHRCC VADRTGHSLLHTLYG+SLRYD YF+EYFALDLLME+G C+G IA+
Sbjct: 183 GGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIAL 237
>D30648-1|BAA06332.1| 664|Homo sapiens flavoprotein subunit of
complex II protein.
Length = 664
Score = 316 bits (775), Expect = 7e-86
Identities = 149/235 (63%), Positives = 170/235 (72%)
Frame = +2
Query: 47 VRTESSIMSTLMKAAVSRSPASLASYLYRNIHVAASGATSKDASVTTNMTKAYTVIDHKH 226
VR S ++S A P L + R H G A V+ +++ Y V+DH+
Sbjct: 4 VRGLSRLLSARRLALAKAWPTVLQTGT-RGFHFTVDGNKRASAKVSDSISAQYPVVDHEF 62
Query: 227 DXXXXXXXXXXXXXXXXXVQEGFKTAVVTKLFPTRSHTVAAQGGINAALGNMEEDSWLWH 406
D + GF TA VTKLFPTRSHTVAAQGGINAALGNMEED+W WH
Sbjct: 63 DAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEEDNWRWH 122
Query: 407 MYDTVKGSDWLGDQDAIHYMTKEAPHAVIELDNYGMPFSRTPEGKIYQRAFGGQSLKFGK 586
YDTVKGSDWLGDQDAIHYMT++AP AV+EL+NYGMPFSRT +GKIYQRAFGGQSLKFGK
Sbjct: 123 FYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENYGMPFSRTEDGKIYQRAFGGQSLKFGK 182
Query: 587 GGQAHRCCAVADRTGHSLLHTLYGQSLRYDCEYFIEYFALDLLMEDGVCKGCIAI 751
GGQAHRCC VADRTGHSLLHTLYG+SLRYD YF+EYFALDLLME+G C+G IA+
Sbjct: 183 GGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIAL 237
>BC001380-1|AAH01380.1| 664|Homo sapiens succinate dehydrogenase
complex, subunit A, flavoprotein (Fp) protein.
Length = 664
Score = 316 bits (775), Expect = 7e-86
Identities = 149/235 (63%), Positives = 170/235 (72%)
Frame = +2
Query: 47 VRTESSIMSTLMKAAVSRSPASLASYLYRNIHVAASGATSKDASVTTNMTKAYTVIDHKH 226
VR S ++S A P L + R H G A V+ +++ Y V+DH+
Sbjct: 4 VRGLSRLLSARRLALAKAWPTVLQTGT-RGFHFTVDGNKRASAKVSDSISAQYPVVDHEF 62
Query: 227 DXXXXXXXXXXXXXXXXXVQEGFKTAVVTKLFPTRSHTVAAQGGINAALGNMEEDSWLWH 406
D + GF TA VTKLFPTRSHTVAAQGGINAALGNMEED+W WH
Sbjct: 63 DAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEEDNWRWH 122
Query: 407 MYDTVKGSDWLGDQDAIHYMTKEAPHAVIELDNYGMPFSRTPEGKIYQRAFGGQSLKFGK 586
YDTVKGSDWLGDQDAIHYMT++AP AV+EL+NYGMPFSRT +GKIYQRAFGGQSLKFGK
Sbjct: 123 FYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENYGMPFSRTEDGKIYQRAFGGQSLKFGK 182
Query: 587 GGQAHRCCAVADRTGHSLLHTLYGQSLRYDCEYFIEYFALDLLMEDGVCKGCIAI 751
GGQAHRCC VADRTGHSLLHTLYG+SLRYD YF+EYFALDLLME+G C+G IA+
Sbjct: 183 GGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIAL 237
>AF171030-1|AAD51006.1| 664|Homo sapiens succinate dehydrogenase
flavoprotein subunit protein.
Length = 664
Score = 316 bits (775), Expect = 7e-86
Identities = 149/235 (63%), Positives = 170/235 (72%)
Frame = +2
Query: 47 VRTESSIMSTLMKAAVSRSPASLASYLYRNIHVAASGATSKDASVTTNMTKAYTVIDHKH 226
VR S ++S A P L + R H G A V+ +++ Y V+DH+
Sbjct: 4 VRGLSRLLSARRLALAKAWPTVLQTGT-RGFHFTVDGNKRASAKVSDSISAQYPVVDHEF 62
Query: 227 DXXXXXXXXXXXXXXXXXVQEGFKTAVVTKLFPTRSHTVAAQGGINAALGNMEEDSWLWH 406
D + GF TA VTKLFPTRSHTVAAQGGINAALGNMEED+W WH
Sbjct: 63 DAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEEDNWRWH 122
Query: 407 MYDTVKGSDWLGDQDAIHYMTKEAPHAVIELDNYGMPFSRTPEGKIYQRAFGGQSLKFGK 586
YDTVKGSDWLGDQDAIHYMT++AP AV+EL+NYGMPFSRT +GKIYQRAFGGQSLKFGK
Sbjct: 123 FYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENYGMPFSRTEDGKIYQRAFGGQSLKFGK 182
Query: 587 GGQAHRCCAVADRTGHSLLHTLYGQSLRYDCEYFIEYFALDLLMEDGVCKGCIAI 751
GGQAHRCC VADRTGHSLLHTLYG+SLRYD YF+EYFALDLLME+G C+G IA+
Sbjct: 183 GGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIAL 237
>AB208991-1|BAD92228.1| 670|Homo sapiens succinate dehydrogenase
complex, subunit A, flavoprotein precursor variant
protein.
Length = 670
Score = 316 bits (775), Expect = 7e-86
Identities = 149/235 (63%), Positives = 170/235 (72%)
Frame = +2
Query: 47 VRTESSIMSTLMKAAVSRSPASLASYLYRNIHVAASGATSKDASVTTNMTKAYTVIDHKH 226
VR S ++S A P L + R H G A V+ +++ Y V+DH+
Sbjct: 10 VRGLSRLLSARRLALAKAWPTVLQTGT-RGFHFTVDGNKRASAKVSDSISAQYPVVDHEF 68
Query: 227 DXXXXXXXXXXXXXXXXXVQEGFKTAVVTKLFPTRSHTVAAQGGINAALGNMEEDSWLWH 406
D + GF TA VTKLFPTRSHTVAAQGGINAALGNMEED+W WH
Sbjct: 69 DAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEEDNWRWH 128
Query: 407 MYDTVKGSDWLGDQDAIHYMTKEAPHAVIELDNYGMPFSRTPEGKIYQRAFGGQSLKFGK 586
YDTVKGSDWLGDQDAIHYMT++AP AV+EL+NYGMPFSRT +GKIYQRAFGGQSLKFGK
Sbjct: 129 FYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENYGMPFSRTEDGKIYQRAFGGQSLKFGK 188
Query: 587 GGQAHRCCAVADRTGHSLLHTLYGQSLRYDCEYFIEYFALDLLMEDGVCKGCIAI 751
GGQAHRCC VADRTGHSLLHTLYG+SLRYD YF+EYFALDLLME+G C+G IA+
Sbjct: 189 GGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIAL 243
>DQ402982-1|ABD77315.1| 550|Homo sapiens succinate dehydrogenase
complex subunit A protein.
Length = 550
Score = 300 bits (736), Expect = 4e-81
Identities = 132/156 (84%), Positives = 144/156 (92%)
Frame = +2
Query: 284 QEGFKTAVVTKLFPTRSHTVAAQGGINAALGNMEEDSWLWHMYDTVKGSDWLGDQDAIHY 463
+ GF TA VTKLFPTRSHTVAAQGGINAALGNMEED+W WH YDTVKGSDWLGDQDAIHY
Sbjct: 17 EAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEEDNWRWHFYDTVKGSDWLGDQDAIHY 76
Query: 464 MTKEAPHAVIELDNYGMPFSRTPEGKIYQRAFGGQSLKFGKGGQAHRCCAVADRTGHSLL 643
MT++AP AV+EL+NYGMPFSRT +GKIYQRAFGGQSLKFGKGGQAHRCC VADRTGHSLL
Sbjct: 77 MTEQAPAAVVELENYGMPFSRTEDGKIYQRAFGGQSLKFGKGGQAHRCCCVADRTGHSLL 136
Query: 644 HTLYGQSLRYDCEYFIEYFALDLLMEDGVCKGCIAI 751
HTLYG+SLRYD YF+EYFALDLLME+G C+G IA+
Sbjct: 137 HTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIAL 172
>BC062438-1|AAH62438.1| 144|Homo sapiens SDHALP2 protein protein.
Length = 144
Score = 231 bits (564), Expect = 3e-60
Identities = 97/124 (78%), Positives = 112/124 (90%)
Frame = +2
Query: 380 MEEDSWLWHMYDTVKGSDWLGDQDAIHYMTKEAPHAVIELDNYGMPFSRTPEGKIYQRAF 559
MEED+W WH YDTVKGSDWLGDQDAIHY+T++AP A++E++NYGMPFSRT +GKIYQRAF
Sbjct: 1 MEEDNWRWHFYDTVKGSDWLGDQDAIHYVTEQAPTAMVEVENYGMPFSRTEDGKIYQRAF 60
Query: 560 GGQSLKFGKGGQAHRCCAVADRTGHSLLHTLYGQSLRYDCEYFIEYFALDLLMEDGVCKG 739
GG SLKFGKGGQAHRCC VADRTGHS+LHTLYG+SLRYD F+EYFALDLLME+G C+G
Sbjct: 61 GGHSLKFGKGGQAHRCCCVADRTGHSILHTLYGRSLRYDTSCFVEYFALDLLMENGECRG 120
Query: 740 CIAI 751
A+
Sbjct: 121 VFAL 124
>BC053551-1|AAH53551.1| 148|Homo sapiens SDHALP2 protein protein.
Length = 148
Score = 227 bits (556), Expect = 3e-59
Identities = 96/124 (77%), Positives = 111/124 (89%)
Frame = +2
Query: 380 MEEDSWLWHMYDTVKGSDWLGDQDAIHYMTKEAPHAVIELDNYGMPFSRTPEGKIYQRAF 559
MEED+W WH YDTVKGSDWLGDQDAIHY+T++AP A++E++NYGMPFSRT +GKIYQRAF
Sbjct: 1 MEEDNWRWHFYDTVKGSDWLGDQDAIHYVTEQAPTAMVEVENYGMPFSRTEDGKIYQRAF 60
Query: 560 GGQSLKFGKGGQAHRCCAVADRTGHSLLHTLYGQSLRYDCEYFIEYFALDLLMEDGVCKG 739
GG SLKFGKG QAHRCC VADRTGHS+LHTLYG+SLRYD F+EYFALDLLME+G C+G
Sbjct: 61 GGHSLKFGKGRQAHRCCCVADRTGHSILHTLYGRSLRYDTSCFVEYFALDLLMENGECRG 120
Query: 740 CIAI 751
A+
Sbjct: 121 VFAL 124
>BC041016-1|AAH41016.1| 519|Homo sapiens SDHA protein protein.
Length = 519
Score = 105 bits (252), Expect = 2e-22
Identities = 56/127 (44%), Positives = 67/127 (52%)
Frame = +2
Query: 47 VRTESSIMSTLMKAAVSRSPASLASYLYRNIHVAASGATSKDASVTTNMTKAYTVIDHKH 226
VR S ++S A P L + R H G A V+ +++ Y V+DH+
Sbjct: 4 VRGLSRLLSARRLALAKAWPTVLQTGT-RGFHFTVDGNKRASAKVSDSISAQYPVVDHEF 62
Query: 227 DXXXXXXXXXXXXXXXXXVQEGFKTAVVTKLFPTRSHTVAAQGGINAALGNMEEDSWLWH 406
D + GF TA VTKLFPTRSHTVAAQGGINAALGNMEED+W WH
Sbjct: 63 DAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEEDNWRWH 122
Query: 407 MYDTVKG 427
YDT G
Sbjct: 123 FYDTSTG 129
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,516,713
Number of Sequences: 237096
Number of extensions: 2490529
Number of successful extensions: 10908
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10718
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10908
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9183116696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -