Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30337
         (803 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    25   0.71 
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    24   1.2  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   2.2  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    23   2.8  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   6.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   6.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   6.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   6.6  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   8.7  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   8.7  

>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 25.0 bits (52), Expect = 0.71
 Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
 Frame = +1

Query: 562 AAAVDRLTDTSKYTGSHRQRF-DETGKGKGIAGRKDLVDGSGYVTGY 699
           A  V R+ D SK  GS+  R  DE   G    G +D  D +GY   Y
Sbjct: 356 AFQVKRVPDPSKRKGSYIFRLPDENNNGGFWVGYED-TDTAGYKASY 401


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 13/50 (26%), Positives = 22/50 (44%)
 Frame = +1

Query: 286 GDPKSDGKAITLSQSDKWMKQAKVIDGKKITTTDTAIHFKKLKSVKLGID 435
           GDP      +TL   D W++  + +  + I T +    F  +K    G+D
Sbjct: 21  GDPTERDLIVTLDDRDLWLR-FECLTNEMIVTKNGRRMFPVVKVTAAGLD 69


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
 Frame = +1

Query: 301 DGKAITLSQSDKWMKQAKVIDGKKITTTDTAIH-FKKLKSVKLGIDDYQKFLDDLAKNKK 477
           D + + L+ S + ++Q K++   +       +  F++L   K   D Y+KF +  +KN K
Sbjct: 379 DSEDLPLNISREMLQQNKILKVIRKNLVKKCLELFEELAEDK---DGYKKFYEQFSKNIK 435

Query: 478 VELDE 492
           + + E
Sbjct: 436 LGIHE 440


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 14/46 (30%), Positives = 21/46 (45%)
 Frame = -1

Query: 680 DPSTKSFLPAIPFPFPVSSKRCLCEPVYLLVSVNRSTAAAAAGDFV 543
           D + K+  P    PF    + C+ +   LLVS  +   A+   DFV
Sbjct: 416 DENKKNLTPYTYLPFGEGPRNCIGQRFALLVS--KVALASVVKDFV 459


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 465 REII*KLLVVVDAEFYRFE 409
           R +  K L VVD ++Y FE
Sbjct: 594 RRVAQKYLRVVDPDYYEFE 612


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 465 REII*KLLVVVDAEFYRFE 409
           R +  K L VVD ++Y FE
Sbjct: 594 RRVAQKYLRVVDPDYYEFE 612


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 465 REII*KLLVVVDAEFYRFE 409
           R +  K L VVD ++Y FE
Sbjct: 594 RRVAQKYLRVVDPDYYEFE 612


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 465 REII*KLLVVVDAEFYRFE 409
           R +  K L VVD ++Y FE
Sbjct: 594 RRVAQKYLRVVDPDYYEFE 612


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 9/24 (37%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
 Frame = +3

Query: 534 ITRYKITGS-RSGRRSIDRHKQIY 602
           IT Y +      GR+ + +H+QIY
Sbjct: 11  ITDYDLNNEFYRGRKKLSKHQQIY 34


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -3

Query: 507 QLLLNFVKFHFF 472
           Q ++ F+K+HFF
Sbjct: 81  QFIVRFMKYHFF 92


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,193
Number of Sequences: 336
Number of extensions: 3971
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21895259
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)