Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30337
(803 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_52992| Best HMM Match : No HMM Matches (HMM E-Value=.) 80 2e-15
SB_34003| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 1e-11
SB_56228| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_9774| Best HMM Match : DUF1572 (HMM E-Value=9.7) 29 3.3
SB_35587| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_50667| Best HMM Match : LIM (HMM E-Value=0.95) 29 4.4
SB_38051| Best HMM Match : LIM (HMM E-Value=0.34) 29 5.8
SB_18835| Best HMM Match : MORN (HMM E-Value=0.94) 29 5.8
SB_56500| Best HMM Match : Tctex-1 (HMM E-Value=0.0079) 28 7.7
SB_13097| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_49562| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_39062| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
>SB_52992| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 516
Score = 79.8 bits (188), Expect = 2e-15
Identities = 51/130 (39%), Positives = 73/130 (56%), Gaps = 9/130 (6%)
Frame = +1
Query: 367 KKITTTDTAIHFKKLK-----SVKLGIDDYQKFLDDLAKNKKVELDEIKKKLTT-C-GQP 525
+K T+TDT I F + + K+ + ++ L A+ K D++ K C G+
Sbjct: 388 QKFTSTDTDIIFSRTEVKPKTERKINFNQFKVALGLCAEKKFGSKDQVGKLTEKICKGKG 447
Query: 526 GITSHVTKSPAAAAAVDRLTDTSKYTGSHRQRFDETGKGKGIAGRKDLVD--GSGYVTGY 699
TS TK+ V+RLTDT YTGSH++RFD++GKGKGI GR D D GYV Y
Sbjct: 448 PATSGATKA-VKVGGVERLTDTKCYTGSHKERFDKSGKGKGIEGRVDRDDKAAQGYVGNY 506
Query: 700 QHKDTYNKSH 729
+ + TY+K+H
Sbjct: 507 KGEGTYDKTH 516
>SB_34003| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 207
Score = 67.3 bits (157), Expect = 1e-11
Identities = 43/111 (38%), Positives = 61/111 (54%), Gaps = 6/111 (5%)
Frame = +1
Query: 334 KWMKQAKVIDGKKITTTDTAIHFKK--LKSV---KLGIDDYQKFLDDLAKNKKVELDEIK 498
K + K+ D KK T D+ I F + +KS K+ ++ L A+ K + +++
Sbjct: 34 KLFRDLKIYD-KKFTQIDSDIIFNRPEVKSKSERKVNFSQFKAALSLCAEKKYGKREDVI 92
Query: 499 KKLTT-CGQPGITSHVTKSPAAAAAVDRLTDTSKYTGSHRQRFDETGKGKG 648
K + C G + T A AVDRLTDT KYTGSH++RFDETGKG+G
Sbjct: 93 KLVDKICEGKGPVASKTTKVVKAGAVDRLTDTRKYTGSHKERFDETGKGRG 143
>SB_56228| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 969
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 490 EIKKKLTTCGQPGITSHVTKSPAAAAAVDRLTD 588
E +KK T CG + TKS A ++DRL D
Sbjct: 915 ETEKKCTVCGAQLLLQGYTKSHAQCFSIDRLDD 947
>SB_9774| Best HMM Match : DUF1572 (HMM E-Value=9.7)
Length = 504
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = -1
Query: 134 FCASVDIFLYKCLMYLCDDIIYYASESVADRRLSDAL 24
F AS DI +CL D +IY AS + D L D L
Sbjct: 153 FIASEDILQIQCLYPDTDSVIYIASPAALDPPLGDYL 189
>SB_35587| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 953
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 490 EIKKKLTTCGQPGITSHVTKSPAAAAAVDRLTDT 591
+ +KK T CG P + TKS ++DRL D+
Sbjct: 899 DAEKKCTVCGTPLLFQGYTKSHPQCFSIDRLDDS 932
>SB_50667| Best HMM Match : LIM (HMM E-Value=0.95)
Length = 318
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 490 EIKKKLTTCGQPGITSHVTKSPAAAAAVDRLTDT 591
++ KK T CG + TKS ++DRL DT
Sbjct: 264 DVDKKCTVCGTQLLLQGYTKSHLQCFSIDRLDDT 297
>SB_38051| Best HMM Match : LIM (HMM E-Value=0.34)
Length = 168
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 490 EIKKKLTTCGQPGITSHVTKSPAAAAAVDRLTDTSKY 600
+ +KK T CG + TKS ++DRL D+ Y
Sbjct: 114 DAEKKCTVCGTQLLLQGYTKSHPQCFSIDRLDDSQVY 150
>SB_18835| Best HMM Match : MORN (HMM E-Value=0.94)
Length = 53
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +1
Query: 586 DTSKYTGSHRQRFDETGKGKGIAGRKDLVDGSGYVTGYQH 705
D +Y G + + G+GK + G DL GS Y G +H
Sbjct: 13 DIGEYEGDRNELGERHGQGKALHGNGDLYTGS-YWNGKRH 51
>SB_56500| Best HMM Match : Tctex-1 (HMM E-Value=0.0079)
Length = 502
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +2
Query: 293 PSPMEKPSRSRKATNG*SKPKSLMERK*QQRTRP 394
P P P SRK + G KP SL E K ++ T P
Sbjct: 296 PPPTPPPKPSRKHSLGTRKPISLQESKQRRNTDP 329
>SB_13097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 607
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +1
Query: 532 TSHVTKSPAAAAAVDRLTDTSKYTGSHRQRFDETGK 639
TS V KS AA DR + TGS Q+ TGK
Sbjct: 304 TSGVPKSSAALLLSDRHLPSKNSTGSSSQKISVTGK 339
>SB_49562| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 734
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 385 DTAIHFKKLKSVKLGIDDYQKFLDDLAKNKKVELDEIKKKL 507
D+ F++L LG+DD + ++D N K D KKKL
Sbjct: 400 DSEQMFQQLNHEVLGVDDDEDSVNDEENNSKTGNDLYKKKL 440
>SB_39062| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 256
Score = 28.3 bits (60), Expect = 7.7
Identities = 24/89 (26%), Positives = 35/89 (39%), Gaps = 1/89 (1%)
Frame = +1
Query: 220 TSSKSEDXXXXXXXXXXXXXXXGDPKSDGKAITLSQSDKWMKQA-KVIDGKKITTTDTAI 396
T +K+ED PKS KA DK K+ K D K +T + +
Sbjct: 8 TPTKTEDRVPAKKRKLSETKLKSSPKS-AKATPSKTGDKQRKKTPKDQDTNKGSTDNADV 66
Query: 397 HFKKLKSVKLGIDDYQKFLDDLAKNKKVE 483
K+ K KL DY F +L + ++
Sbjct: 67 EIKRDKQGKLVFPDYPDFKPNLTPKEVMQ 95
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,175,438
Number of Sequences: 59808
Number of extensions: 514847
Number of successful extensions: 1830
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1824
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2227723674
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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