Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30337
(803 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88308-6|AAB42320.1| 180|Caenorhabditis elegans Hypothetical pr... 104 6e-23
U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog (hedg... 34 0.14
AF024502-2|AAK77623.1| 591|Caenorhabditis elegans Hypothetical ... 33 0.32
Z83223-6|CAB05719.1| 884|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z81538-6|CAB04387.1| 884|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical pr... 29 2.9
AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical... 29 2.9
Z68760-15|CAL44969.1| 462|Caenorhabditis elegans Hypothetical p... 29 3.9
Z68760-13|CAD30434.1| 423|Caenorhabditis elegans Hypothetical p... 29 3.9
Z68760-12|CAD27623.1| 436|Caenorhabditis elegans Hypothetical p... 29 3.9
Z68760-11|CAA92997.2| 438|Caenorhabditis elegans Hypothetical p... 29 3.9
X68070-1|CAA48207.1| 438|Caenorhabditis elegans Lin-3 protein. 29 3.9
U70856-2|AAB09164.1| 461|Caenorhabditis elegans Hypothetical pr... 29 3.9
AL032641-9|CAL44964.1| 462|Caenorhabditis elegans Hypothetical ... 29 3.9
AL032641-7|CAD30455.1| 423|Caenorhabditis elegans Hypothetical ... 29 3.9
AL032641-6|CAD27613.1| 436|Caenorhabditis elegans Hypothetical ... 29 3.9
AL032641-5|CAA21649.2| 438|Caenorhabditis elegans Hypothetical ... 29 3.9
Z92808-1|CAB07266.2| 606|Caenorhabditis elegans Hypothetical pr... 29 5.1
AF016682-9|AAB66189.3| 441|Caenorhabditis elegans Hypothetical ... 29 5.1
AF016682-8|AAO38605.1| 422|Caenorhabditis elegans Hypothetical ... 29 5.1
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 28 6.8
AF101315-2|AAC69228.1| 990|Caenorhabditis elegans Hypothetical ... 28 6.8
AF016424-8|AAB65328.2| 467|Caenorhabditis elegans Hypothetical ... 28 6.8
AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf famil... 28 9.0
AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical... 28 9.0
AF098995-11|AAC67488.2| 415|Caenorhabditis elegans Hypothetical... 28 9.0
AF024502-3|AAB70373.1| 836|Caenorhabditis elegans Hypothetical ... 28 9.0
AC024791-5|AAF60661.2| 468|Caenorhabditis elegans Hypothetical ... 28 9.0
>U88308-6|AAB42320.1| 180|Caenorhabditis elegans Hypothetical
protein C32E8.3 protein.
Length = 180
Score = 104 bits (250), Expect = 6e-23
Identities = 60/143 (41%), Positives = 82/143 (57%), Gaps = 10/143 (6%)
Frame = +1
Query: 331 DKWMKQAKVIDGKKITTTDTAIHFKKLKSVK--LGIDDYQKFL----DDLAKNKKV---- 480
DKW+K A V+D K IT T T I F K+ K D+ +K L +D A+ K
Sbjct: 38 DKWLKDAGVLDNKAITGTMTGIAFSKVTGPKKKATFDETKKVLAFVAEDRARQSKKPIQD 97
Query: 481 ELDEIKKKLTTCGQPGITSHVTKSPAAAAAVDRLTDTSKYTGSHRQRFDETGKGKGIAGR 660
ELD I +KL P + + AA RLTD +KYTG+H++RFD GKGKG +GR
Sbjct: 98 ELDAITEKLAKLEAPSVGGAAKAN--AAGVYSRLTDHTKYTGAHKERFDAEGKGKGKSGR 155
Query: 661 KDLVDGSGYVTGYQHKDTYNKSH 729
D + +GYV Y++KD+Y+K+H
Sbjct: 156 ADTTENTGYVGAYKNKDSYDKTH 178
>U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 6 protein.
Length = 559
Score = 33.9 bits (74), Expect = 0.14
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
Frame = +2
Query: 215 MERPVRARIAPYLSRKPSRRFPNLE----IPSPMEKPSRSR 325
+ERPV AR APY+ P+R P +E P P +P R+R
Sbjct: 210 IERPVPARPAPYIEPTPARPAPYIEPSTAKPQPRPQPPRTR 250
Score = 33.1 bits (72), Expect = 0.24
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 6/67 (8%)
Frame = +2
Query: 215 MERPVRARIAPYLSR-KPSRRFPNLE-----IPSPMEKPSRSRKATNG*SKPKSLMERK* 376
+ERPV AR APY+ R +P+R P +E P+P +P+ +R A R
Sbjct: 186 IERPVPARPAPYIERPEPARPAPYIERPVPARPAPYIEPTPARPAPYIEPSTAKPQPRPQ 245
Query: 377 QQRTRPF 397
RTRP+
Sbjct: 246 PPRTRPY 252
Score = 31.1 bits (67), Expect = 0.97
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +2
Query: 215 MERPVRARIAPYLSRK-PSRRFPNLEIPSP 301
+ERPV AR PY+ R P+R P +E P P
Sbjct: 174 IERPVPARPTPYIERPVPARPAPYIERPEP 203
>AF024502-2|AAK77623.1| 591|Caenorhabditis elegans Hypothetical
protein M151.4 protein.
Length = 591
Score = 32.7 bits (71), Expect = 0.32
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Frame = +1
Query: 397 HFKKLKSVKLGIDDYQKFLDDLAK---NKKVELDEIKKKLTTCGQPGITSHVTKSPAAAA 567
+ ++ +K + D Q+ L+ +AK NK+ E++E+KK ++S + K+ AA
Sbjct: 216 YMNDMRDLKKALKDNQEGLEKIAKDVKNKEGEIEELKK--------SVSSEIVKATEAAH 267
Query: 568 AVDRL-TDTSKYTGSHRQRFDETGK 639
A D+L K H +R ++ K
Sbjct: 268 ATDQLRKKLQKQQDEHEKRVEQEHK 292
>Z83223-6|CAB05719.1| 884|Caenorhabditis elegans Hypothetical
protein E01G4.6 protein.
Length = 884
Score = 29.9 bits (64), Expect = 2.2
Identities = 37/155 (23%), Positives = 62/155 (40%)
Frame = +1
Query: 136 TDAAVEQVTQEVKDVKLENGNAPGASNGTSSKSEDXXXXXXXXXXXXXXXGDPKSDGKAI 315
T AVE+ T+EV + E AP A+ SS+ K K +
Sbjct: 308 TTKAVEEATEEVTEEATEATEAPVATTKESSEMH------VNTIRNMIRSASEKDLSKYV 361
Query: 316 TLSQSDKWMKQAKVIDGKKITTTDTAIHFKKLKSVKLGIDDYQKFLDDLAKNKKVELDEI 495
TL K+ + ++ + KK+T T K KL K L + A ++K + EI
Sbjct: 362 TLISEGKFSELFELAEQKKLTLTSKFDEKLSSKMAKL------KDLINEALSEKEKSGEI 415
Query: 496 KKKLTTCGQPGITSHVTKSPAAAAAVDRLTDTSKY 600
++ + +P + V AV ++D+ K+
Sbjct: 416 EQAMEKFEKPEKSELVAMEDKDTPAVFTISDSLKH 450
>Z81538-6|CAB04387.1| 884|Caenorhabditis elegans Hypothetical
protein E01G4.6 protein.
Length = 884
Score = 29.9 bits (64), Expect = 2.2
Identities = 37/155 (23%), Positives = 62/155 (40%)
Frame = +1
Query: 136 TDAAVEQVTQEVKDVKLENGNAPGASNGTSSKSEDXXXXXXXXXXXXXXXGDPKSDGKAI 315
T AVE+ T+EV + E AP A+ SS+ K K +
Sbjct: 308 TTKAVEEATEEVTEEATEATEAPVATTKESSEMH------VNTIRNMIRSASEKDLSKYV 361
Query: 316 TLSQSDKWMKQAKVIDGKKITTTDTAIHFKKLKSVKLGIDDYQKFLDDLAKNKKVELDEI 495
TL K+ + ++ + KK+T T K KL K L + A ++K + EI
Sbjct: 362 TLISEGKFSELFELAEQKKLTLTSKFDEKLSSKMAKL------KDLINEALSEKEKSGEI 415
Query: 496 KKKLTTCGQPGITSHVTKSPAAAAAVDRLTDTSKY 600
++ + +P + V AV ++D+ K+
Sbjct: 416 EQAMEKFEKPEKSELVAMEDKDTPAVFTISDSLKH 450
>Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical
protein F15D4.7 protein.
Length = 2268
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/74 (25%), Positives = 39/74 (52%)
Frame = +1
Query: 340 MKQAKVIDGKKITTTDTAIHFKKLKSVKLGIDDYQKFLDDLAKNKKVELDEIKKKLTTCG 519
+K+ K + G++ + D +H +KL S+ D+Q+ + DL++++ V I KK+
Sbjct: 460 LKELKAVYGQEEDSLD--LH-EKLLSLPFDQYDWQEMIKDLSRHRSVVYQLINKKMNVDD 516
Query: 520 QPGITSHVTKSPAA 561
I+ + K P +
Sbjct: 517 IRTISPFLAKLPTS 530
>AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical
protein F15D4.7 protein.
Length = 2268
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/74 (25%), Positives = 39/74 (52%)
Frame = +1
Query: 340 MKQAKVIDGKKITTTDTAIHFKKLKSVKLGIDDYQKFLDDLAKNKKVELDEIKKKLTTCG 519
+K+ K + G++ + D +H +KL S+ D+Q+ + DL++++ V I KK+
Sbjct: 460 LKELKAVYGQEEDSLD--LH-EKLLSLPFDQYDWQEMIKDLSRHRSVVYQLINKKMNVDD 516
Query: 520 QPGITSHVTKSPAA 561
I+ + K P +
Sbjct: 517 IRTISPFLAKLPTS 530
>Z68760-15|CAL44969.1| 462|Caenorhabditis elegans Hypothetical
protein F36H1.4d protein.
Length = 462
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/65 (23%), Positives = 27/65 (41%)
Frame = +1
Query: 340 MKQAKVIDGKKITTTDTAIHFKKLKSVKLGIDDYQKFLDDLAKNKKVELDEIKKKLTTCG 519
++ I + I DT H+K + V++ +Y +D + + E+ K TC
Sbjct: 362 LRSQGTIPSRSINDDDTPKHYKSVPRVEVSAINYSGHIDFSTVSYQSTESEVSKASVTCP 421
Query: 520 QPGIT 534
P T
Sbjct: 422 PPAHT 426
>Z68760-13|CAD30434.1| 423|Caenorhabditis elegans Hypothetical
protein F36H1.4c protein.
Length = 423
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/65 (23%), Positives = 27/65 (41%)
Frame = +1
Query: 340 MKQAKVIDGKKITTTDTAIHFKKLKSVKLGIDDYQKFLDDLAKNKKVELDEIKKKLTTCG 519
++ I + I DT H+K + V++ +Y +D + + E+ K TC
Sbjct: 323 LRSQGTIPSRSINDDDTPKHYKSVPRVEVSAINYSGHIDFSTVSYQSTESEVSKASVTCP 382
Query: 520 QPGIT 534
P T
Sbjct: 383 PPAHT 387
>Z68760-12|CAD27623.1| 436|Caenorhabditis elegans Hypothetical
protein F36H1.4b protein.
Length = 436
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/65 (23%), Positives = 27/65 (41%)
Frame = +1
Query: 340 MKQAKVIDGKKITTTDTAIHFKKLKSVKLGIDDYQKFLDDLAKNKKVELDEIKKKLTTCG 519
++ I + I DT H+K + V++ +Y +D + + E+ K TC
Sbjct: 336 LRSQGTIPSRSINDDDTPKHYKSVPRVEVSAINYSGHIDFSTVSYQSTESEVSKASVTCP 395
Query: 520 QPGIT 534
P T
Sbjct: 396 PPAHT 400
>Z68760-11|CAA92997.2| 438|Caenorhabditis elegans Hypothetical
protein F36H1.4a protein.
Length = 438
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/65 (23%), Positives = 27/65 (41%)
Frame = +1
Query: 340 MKQAKVIDGKKITTTDTAIHFKKLKSVKLGIDDYQKFLDDLAKNKKVELDEIKKKLTTCG 519
++ I + I DT H+K + V++ +Y +D + + E+ K TC
Sbjct: 338 LRSQGTIPSRSINDDDTPKHYKSVPRVEVSAINYSGHIDFSTVSYQSTESEVSKASVTCP 397
Query: 520 QPGIT 534
P T
Sbjct: 398 PPAHT 402
>X68070-1|CAA48207.1| 438|Caenorhabditis elegans Lin-3 protein.
Length = 438
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/65 (23%), Positives = 27/65 (41%)
Frame = +1
Query: 340 MKQAKVIDGKKITTTDTAIHFKKLKSVKLGIDDYQKFLDDLAKNKKVELDEIKKKLTTCG 519
++ I + I DT H+K + V++ +Y +D + + E+ K TC
Sbjct: 338 LRSQGTIPSRSINDDDTPKHYKSVPRVEVSAINYSGHIDFSTVSYQSTESEVSKASVTCP 397
Query: 520 QPGIT 534
P T
Sbjct: 398 PPAHT 402
>U70856-2|AAB09164.1| 461|Caenorhabditis elegans Hypothetical
protein F57F4.1 protein.
Length = 461
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -3
Query: 282 FGKRLEGFLER*GAILALTGRSIGCSRRVPVLKLDVLDF 166
+GK GFL R LA T + C RV V +D ++F
Sbjct: 321 YGKIFGGFLMRKALELAYTNAKLYCKGRVAVRSMDHIEF 359
>AL032641-9|CAL44964.1| 462|Caenorhabditis elegans Hypothetical
protein F36H1.4d protein.
Length = 462
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/65 (23%), Positives = 27/65 (41%)
Frame = +1
Query: 340 MKQAKVIDGKKITTTDTAIHFKKLKSVKLGIDDYQKFLDDLAKNKKVELDEIKKKLTTCG 519
++ I + I DT H+K + V++ +Y +D + + E+ K TC
Sbjct: 362 LRSQGTIPSRSINDDDTPKHYKSVPRVEVSAINYSGHIDFSTVSYQSTESEVSKASVTCP 421
Query: 520 QPGIT 534
P T
Sbjct: 422 PPAHT 426
>AL032641-7|CAD30455.1| 423|Caenorhabditis elegans Hypothetical
protein F36H1.4c protein.
Length = 423
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/65 (23%), Positives = 27/65 (41%)
Frame = +1
Query: 340 MKQAKVIDGKKITTTDTAIHFKKLKSVKLGIDDYQKFLDDLAKNKKVELDEIKKKLTTCG 519
++ I + I DT H+K + V++ +Y +D + + E+ K TC
Sbjct: 323 LRSQGTIPSRSINDDDTPKHYKSVPRVEVSAINYSGHIDFSTVSYQSTESEVSKASVTCP 382
Query: 520 QPGIT 534
P T
Sbjct: 383 PPAHT 387
>AL032641-6|CAD27613.1| 436|Caenorhabditis elegans Hypothetical
protein F36H1.4b protein.
Length = 436
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/65 (23%), Positives = 27/65 (41%)
Frame = +1
Query: 340 MKQAKVIDGKKITTTDTAIHFKKLKSVKLGIDDYQKFLDDLAKNKKVELDEIKKKLTTCG 519
++ I + I DT H+K + V++ +Y +D + + E+ K TC
Sbjct: 336 LRSQGTIPSRSINDDDTPKHYKSVPRVEVSAINYSGHIDFSTVSYQSTESEVSKASVTCP 395
Query: 520 QPGIT 534
P T
Sbjct: 396 PPAHT 400
>AL032641-5|CAA21649.2| 438|Caenorhabditis elegans Hypothetical
protein F36H1.4a protein.
Length = 438
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/65 (23%), Positives = 27/65 (41%)
Frame = +1
Query: 340 MKQAKVIDGKKITTTDTAIHFKKLKSVKLGIDDYQKFLDDLAKNKKVELDEIKKKLTTCG 519
++ I + I DT H+K + V++ +Y +D + + E+ K TC
Sbjct: 338 LRSQGTIPSRSINDDDTPKHYKSVPRVEVSAINYSGHIDFSTVSYQSTESEVSKASVTCP 397
Query: 520 QPGIT 534
P T
Sbjct: 398 PPAHT 402
>Z92808-1|CAB07266.2| 606|Caenorhabditis elegans Hypothetical
protein M04C3.2 protein.
Length = 606
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/71 (22%), Positives = 30/71 (42%)
Frame = +1
Query: 289 DPKSDGKAITLSQSDKWMKQAKVIDGKKITTTDTAIHFKKLKSVKLGIDDYQKFLDDLAK 468
D + A + + ++KQ + + +I F K+ K +DY+K + + K
Sbjct: 418 DDEEKSTAKLVKNIEGFLKQVTLRFPRSCKLYKISIQFTKISIFKFSANDYEKHITNAKK 477
Query: 469 NKKVELDEIKK 501
KK I+K
Sbjct: 478 EKKENEPNIRK 488
>AF016682-9|AAB66189.3| 441|Caenorhabditis elegans Hypothetical
protein T07D3.9a protein.
Length = 441
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 5/50 (10%)
Frame = -3
Query: 282 FGKRLEGFLER*GAILALTGRSIGCSRRVPVLKLDVLDF-----LCHLLH 148
+GK GFL R LA T + C RV + +D ++F + H+LH
Sbjct: 301 YGKIFGGFLMRKALELAHTNAKLYCKGRVAIRSMDQIEFQKPVEIGHVLH 350
>AF016682-8|AAO38605.1| 422|Caenorhabditis elegans Hypothetical
protein T07D3.9b protein.
Length = 422
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 5/50 (10%)
Frame = -3
Query: 282 FGKRLEGFLER*GAILALTGRSIGCSRRVPVLKLDVLDF-----LCHLLH 148
+GK GFL R LA T + C RV + +D ++F + H+LH
Sbjct: 256 YGKIFGGFLMRKALELAHTNAKLYCKGRVAIRSMDQIEFQKPVEIGHVLH 305
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 28.3 bits (60), Expect = 6.8
Identities = 42/181 (23%), Positives = 71/181 (39%), Gaps = 2/181 (1%)
Frame = +1
Query: 151 EQVTQEVKDVKLENGNAPGASNGTSSKSEDXXXXXXXXXXXXXXXGDPKSDGKAITLSQS 330
E++ QEVK+ AP + T +K+E+ P +GK S+
Sbjct: 3 EEIKQEVKE------EAPETT--TEAKTEEAAPVAEVVAEVVTNGDKPAENGKTEEPSKY 54
Query: 331 DKWMKQAKVIDGKKITTTDTAIHFKKLKSVKLGIDDYQKFLDDLAKN--KKVELDEIKKK 504
+ K+I G K+ + + +S LG +D LDD A + V LD+ K
Sbjct: 55 AETENYKKLI-GLKMKPALADVVCEIYESGLLGPED----LDDRAVDIINSVNLDQAKFI 109
Query: 505 LTTCGQPGITSHVTKSPAAAAAVDRLTDTSKYTGSHRQRFDETGKGKGIAGRKDLVDGSG 684
T + TKS + + D + G+ + G +A K+L++ +G
Sbjct: 110 FTEIKNSELFGVATKSLYVTSLIRSFKDRCRQQGAAAVTSGKLINGPELAALKNLLETTG 169
Query: 685 Y 687
Y
Sbjct: 170 Y 170
>AF101315-2|AAC69228.1| 990|Caenorhabditis elegans Hypothetical
protein T22H9.3 protein.
Length = 990
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -1
Query: 695 PVT*PDPSTKSFLPAIPFPFPVSSKR 618
P T +PS FLP IPF P ++R
Sbjct: 2 PTTVQNPSPTGFLPQIPFRIPKRTRR 27
>AF016424-8|AAB65328.2| 467|Caenorhabditis elegans Hypothetical
protein F39G3.2 protein.
Length = 467
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 227 VRARIAPYLSRKPSRRFPNLEIPS 298
+R R P R P+R FPNL++PS
Sbjct: 223 LRLRPWPSFGRLPTRLFPNLKLPS 246
>AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf family
ATPase protein.
Length = 2395
Score = 27.9 bits (59), Expect = 9.0
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Frame = +1
Query: 454 DDLAKNKKVELDEIKKKLTTCGQPGITSHVTKSPAAAAAVDRLTDTSKYTGSHRQ---RF 624
+DL + K+ +L+E K + CG + +SP++ A T +S T Q
Sbjct: 436 EDLEEMKREKLEEQKARKEACGDNEEKMEIDESPSSDAQKPS-TSSSDLTAEQLQDPTAE 494
Query: 625 DETGKGKGIAGRKDLV 672
D G G G+ D V
Sbjct: 495 DGNGDGHGVLENVDYV 510
>AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical
protein Y111B2A.22 protein.
Length = 2395
Score = 27.9 bits (59), Expect = 9.0
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Frame = +1
Query: 454 DDLAKNKKVELDEIKKKLTTCGQPGITSHVTKSPAAAAAVDRLTDTSKYTGSHRQ---RF 624
+DL + K+ +L+E K + CG + +SP++ A T +S T Q
Sbjct: 436 EDLEEMKREKLEEQKARKEACGDNEEKMEIDESPSSDAQKPS-TSSSDLTAEQLQDPTAE 494
Query: 625 DETGKGKGIAGRKDLV 672
D G G G+ D V
Sbjct: 495 DGNGDGHGVLENVDYV 510
>AF098995-11|AAC67488.2| 415|Caenorhabditis elegans Hypothetical
protein F58E1.11 protein.
Length = 415
Score = 27.9 bits (59), Expect = 9.0
Identities = 21/60 (35%), Positives = 33/60 (55%)
Frame = +1
Query: 334 KWMKQAKVIDGKKITTTDTAIHFKKLKSVKLGIDDYQKFLDDLAKNKKVELDEIKKKLTT 513
KW++ DGK+I T T FK++KS K+ +DD ++ K K V ++E LT+
Sbjct: 330 KWLR-----DGKQIGTVFTLSSFKEIKS-KILLDDVKRRF----KEKIVRVEESNGDLTS 379
>AF024502-3|AAB70373.1| 836|Caenorhabditis elegans Hypothetical
protein M151.3 protein.
Length = 836
Score = 27.9 bits (59), Expect = 9.0
Identities = 26/105 (24%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Frame = +1
Query: 313 ITLSQSDKWMKQAKVIDGKKITTT--DTAIHFKKLKSVKLGIDDYQKFLDDLAKNKKVEL 486
+TL+ K + K+ID +K + + KK+K ++ I+D ++ L ++ EL
Sbjct: 198 LTLNAMKKNEELQKLIDSQKKESRRFQDSARIKKMK-LEAQIEDLEEKLKFAEQHFHGEL 256
Query: 487 DEIKKKLTTCGQPGITSHVTKSPAAAAAVDR-LTDTSKYTGSHRQ 618
E TC + GI + K P+A + ++ L + S+ T ++
Sbjct: 257 QETCFSGETCLETGILGYRGKFPSAPSEAEKMLKEMSRTTNDAKK 301
>AC024791-5|AAF60661.2| 468|Caenorhabditis elegans Hypothetical
protein Y47G6A.14 protein.
Length = 468
Score = 27.9 bits (59), Expect = 9.0
Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 2/88 (2%)
Frame = +1
Query: 310 AITLSQS--DKWMKQAKVIDGKKITTTDTAIHFKKLKSVKLGIDDYQKFLDDLAKNKKVE 483
A+T+ Q +K K A +D + T D ++ + D K+ D+ +N E
Sbjct: 77 AVTMIQKLREKPKKPANAVDCTQCTKYDNESDMFVCRNC---VTDAFKY--DVVENLGAE 131
Query: 484 LDEIKKKLTTCGQPGITSHVTKSPAAAA 567
+D K L CG + SHVT+ A
Sbjct: 132 VDLDIKSLALCGSCALRSHVTQGHETVA 159
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,002,663
Number of Sequences: 27780
Number of extensions: 387136
Number of successful extensions: 1310
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1251
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1308
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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