Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30337
(803 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g16340.1 68416.m02066 ABC transporter family protein similar ... 34 0.096
At3g04110.1 68416.m00435 glutamate receptor family protein (GLR1... 32 0.51
At5g50260.1 68418.m06224 cysteine proteinase, putative similar t... 30 1.6
At1g45191.2 68414.m05184 glycosyl hydrolase family 1 protein Sin... 30 1.6
At4g22100.1 68417.m03195 glycosyl hydrolase family 1 protein con... 29 2.7
At4g10390.1 68417.m01705 protein kinase family protein contains ... 29 2.7
At2g22795.1 68415.m02704 expressed protein 29 3.6
At1g77410.1 68414.m09015 beta-galactosidase, putative / lactase,... 29 3.6
At1g65340.1 68414.m07409 cytochrome P450, putative similar to cy... 29 3.6
At5g36230.1 68418.m04371 eIF4-gamma/eIF5/eIF2-epsilon domain-con... 29 4.8
At4g16280.2 68417.m02470 flowering time control protein / FCA ga... 29 4.8
At4g16280.1 68417.m02469 flowering time control protein / FCA ga... 29 4.8
At3g11720.1 68416.m01437 expressed protein 29 4.8
At1g60570.1 68414.m06819 kelch repeat-containing F-box family pr... 29 4.8
At3g24650.1 68416.m03095 abscisic acid-insensitive protein 3 (AB... 28 6.3
At1g65220.1 68414.m07394 eIF4-gamma/eIF5/eIF2-epsilon domain-con... 28 6.3
At4g37460.1 68417.m05302 tetratricopeptide repeat (TPR)-containi... 28 8.3
At3g28720.1 68416.m03586 expressed protein 28 8.3
>At3g16340.1 68416.m02066 ABC transporter family protein similar to
PDR5-like ABC transporter GI:1514643 from [Spirodela
polyrhiza]; contains Pfam profile: PF00005 ABC
transporter
Length = 1416
Score = 34.3 bits (75), Expect = 0.096
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +1
Query: 334 KWMKQAKVIDGKKITTTDTAIHFKKLKSVKLGIDDYQKFLDDLAKNKKVELDEIKKK 504
KW K+ ++ TT H + KLG+DD QKF+D + K + + ++ KK
Sbjct: 41 KWAALEKLPTFARLRTTIIHPHEDLVDVTKLGVDDRQKFIDSIFKVTEEDNEKFLKK 97
>At3g04110.1 68416.m00435 glutamate receptor family protein (GLR1.1)
(GLR1) identical to putative glutamate receptor (GLR1)
GB:AF079998 [Arabidopsis thaliana]; plant glutamate
receptor family, PMID:11379626
Length = 808
Score = 31.9 bits (69), Expect = 0.51
Identities = 29/109 (26%), Positives = 40/109 (36%)
Frame = +1
Query: 457 DLAKNKKVELDEIKKKLTTCGQPGITSHVTKSPAAAAAVDRLTDTSKYTGSHRQRFDETG 636
DL KN K E + L S K P + + KY + D T
Sbjct: 88 DLLKNAKAEAIVGAQSLQEAKLLATISEKAKVPVISTFLPNTLSLKKYDNFIQWTHDTTS 147
Query: 637 KGKGIAGRKDLVDGSGYVTGYQHKDTYNKSH*IQIKNFAQLYWCYIERS 783
+ KGI V Y+ D +++S I ++NF Q YI RS
Sbjct: 148 EAKGITSLIQDFSCKSVVVIYEDADDWSESLQILVENF-QDKGIYIARS 195
>At5g50260.1 68418.m06224 cysteine proteinase, putative similar to
cysteine endopeptidase precursor CysEP GI:2944446 from
[Ricinus communis]
Length = 361
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +3
Query: 282 IWRSQVRWKSHHALAKRQMDEASQSH*WKENNNNGH 389
+W RW+SHH +A+ ++A + + +K N + H
Sbjct: 34 LWELYERWRSHHTVARSLEEKAKRFNVFKHNVKHIH 69
>At1g45191.2 68414.m05184 glycosyl hydrolase family 1 protein Since
this genomic sequence region is unfinished, the
annotated gene may be missing a stop codon or start
codon
Length = 487
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +1
Query: 361 DGKKITTTDTAIHFKKLKSVKLGIDDYQKFLDDL 462
DG+K + DT +H +K+ + + D Y K+ +D+
Sbjct: 56 DGRKPSVWDTFLHCRKMDNGDIACDGYHKYKEDV 89
>At4g22100.1 68417.m03195 glycosyl hydrolase family 1 protein
contains Pfam PF00232 : Glycosyl hydrolase family 1
domain; similar to hydroxyisourate hydrolase
(GI:19569603) [Glycine max]; furostanol glycoside
26-O-beta-glucosidase F26G,Costus speciosus,
PATCHX:S78099
Length = 507
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +1
Query: 361 DGKKITTTDTAIHFKKLKSVKLGIDDYQKFLDDLAKNKKVELDEIK 498
DG+K + DT +H + L + + D Y K+ +D+ + LD +
Sbjct: 49 DGRKPSVWDTFLHTRNLSNGDITSDGYHKYKEDVKLMVETGLDAFR 94
>At4g10390.1 68417.m01705 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 342
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +1
Query: 415 SVKLGIDDYQKFLDDLAKNKKVELDEIKKKLTTCGQPGITSHVTKSPAAAAAVDRL 582
SV + D ++FLD +++DE+K L+ I+S ++ P+AA D L
Sbjct: 272 SVDISEDKVRQFLDPRLLRDSLDIDEVKTMLSVAA-VCISSKLSLRPSAAQVADTL 326
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +1
Query: 121 TEAQNTDAAVEQVTQEVKDVKLENGNAPGASNGTSSKS 234
T+ Q+ ++ + QEVKDV+ + P + NG S++S
Sbjct: 693 TQEQSDSSSDTNLPQEVKDVRTDLETLPDSGNGGSNES 730
>At1g77410.1 68414.m09015 beta-galactosidase, putative / lactase,
putative similar to beta-galactosidase SP:P45582 from
[Asparagus officinalis]
Length = 815
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 80 HHTNTLNTYKEKCLLKHRIRMPLWSK 157
H N+L ++ CL K R +P+WSK
Sbjct: 769 HSPNSLAVVQKACLKKSRCSVPVWSK 794
>At1g65340.1 68414.m07409 cytochrome P450, putative similar to
cytochrome P450 GI:4688670 from [Catharanthus roseus]
Length = 503
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 5/43 (11%)
Frame = +1
Query: 487 DEIKKKLTTCGQPGITSHVTKSPAAAAAVDRLT-----DTSKY 600
D++ +K+ T + I SH T P+ A+D LT DT+KY
Sbjct: 250 DQLLEKIITAKREEINSHGTHHPSRGEAIDVLTYYMTMDTTKY 292
>At5g36230.1 68418.m04371 eIF4-gamma/eIF5/eIF2-epsilon
domain-containing protein low similarity to SP|Q13144
Translation initiation factor eIF-2B epsilon subunit
(eIF-2B GDP-GTP exchange factor) {Homo sapiens};
contains Pfam profile PF02020:
eIF4-gamma/eIF5/eIF2-epsilon
Length = 411
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 121 TEAQNTDAAVEQVTQEVKDVKL 186
TE N D +E V Q++KD KL
Sbjct: 265 TEESNVDEVIESVKQQIKDAKL 286
>At4g16280.2 68417.m02470 flowering time control protein / FCA gamma
(FCA) identical to SP|O04425 Flowering time control
protein FCA {Arabidopsis thaliana}; four alternative
splice variants, one splicing isoform contains a
non-consensus CA donor splice site, based on cDNA:
gi:2204090
Length = 747
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +1
Query: 130 QNTDAAVEQVTQEVKDVKLENGNAPGASNGTSSKSE 237
Q++ A+ Q+ Q+V+ ++ N N P + NG + K +
Sbjct: 523 QSSQQAISQLQQQVQSMQQPNQNLPLSQNGRAGKQQ 558
>At4g16280.1 68417.m02469 flowering time control protein / FCA gamma
(FCA) identical to SP|O04425 Flowering time control
protein FCA {Arabidopsis thaliana}; four alternative
splice variants, one splicing isoform contains a
non-consensus CA donor splice site, based on cDNA:
gi:2204090
Length = 505
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +1
Query: 130 QNTDAAVEQVTQEVKDVKLENGNAPGASNGTSSKSE 237
Q++ A+ Q+ Q+V+ ++ N N P + NG + K +
Sbjct: 281 QSSQQAISQLQQQVQSMQQPNQNLPLSQNGRAGKQQ 316
>At3g11720.1 68416.m01437 expressed protein
Length = 542
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
Frame = +1
Query: 148 VEQVTQE--VKDVKLENGNAPGASNGTSSKSED 240
V ++ +E V D+K EN ++P +S+ +SS SED
Sbjct: 348 VPEIEEEECVDDLKEENKSSPSSSSSSSSSSED 380
>At1g60570.1 68414.m06819 kelch repeat-containing F-box family
protein low similarity to SKP1 interacting partner 6
[Arabidopsis thaliana] GI:10716957; contains Pfam
profiles PF01344: Kelch motif, PF00646: F-box domain
Length = 381
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 664 DLVDGSGYVTGYQHKDTYNKSH*IQIKNFAQLYW 765
+L+DG YVTG H+ +YN S +++ + W
Sbjct: 165 NLIDGKIYVTGGCHRGSYNPSKWMEVFDLKTETW 198
>At3g24650.1 68416.m03095 abscisic acid-insensitive protein 3 (ABI3)
identical to abscisic acid-insensitive protein 3
GI:16146 SP:Q01593 from [Arabidopsis thaliana], (Plant
Cell 4 (10), 1251-1261 (1992))
Length = 720
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +3
Query: 330 RQMDEASQSH*WKENNNNGHGHSLQKTQIGKTRHRRLPEVS 452
RQ S H NNNN + + +TQIG+T P+++
Sbjct: 465 RQRRFLSHHHRHNNNNNNNNNNQQNQTQIGETCAAVAPQLN 505
>At1g65220.1 68414.m07394 eIF4-gamma/eIF5/eIF2-epsilon
domain-containing protein low similarity to SP|P47823
Translation initiation factor eIF-2B epsilon subunit
(eIF-2B GDP-GTP exchange factor) {Oryctolagus
cuniculus}; contains Pfam profile PF02020:
eIF4-gamma/eIF5/eIF2-epsilon
Length = 411
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = +1
Query: 88 KYIKHL*RKMSTEAQNTDAAVEQVTQEVKDVKL 186
K IK + TE N D E V Q+VKD KL
Sbjct: 254 KEIKAVLTSQVTEEINVDEVTEMVKQQVKDAKL 286
>At4g37460.1 68417.m05302 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515: TPR Domain
Length = 883
Score = 27.9 bits (59), Expect = 8.3
Identities = 20/78 (25%), Positives = 37/78 (47%)
Frame = +1
Query: 1 GSISAATKSASLKRLSATDSLA*YMISSHKYIKHL*RKMSTEAQNTDAAVEQVTQEVKDV 180
G SA ++A +K+L + L + + + I + + +TE+ A + K
Sbjct: 99 GYKSALQQTADVKQLLELEEL---LKDARREIDGILKSHATESPQETPAYHSEKSDEKSD 155
Query: 181 KLENGNAPGASNGTSSKS 234
KL+N + +SNG S +S
Sbjct: 156 KLDNHESGASSNGNSHES 173
>At3g28720.1 68416.m03586 expressed protein
Length = 687
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -2
Query: 454 LETSGSRRCRVLPI*VF*SEWPCPLLLFSFHQ 359
+E G+ RVLP+ VF + PLLL +HQ
Sbjct: 424 VEEEGNEFARVLPVYVFDLDINTPLLLDRYHQ 455
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,955,805
Number of Sequences: 28952
Number of extensions: 357637
Number of successful extensions: 1077
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1075
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1824072800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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