Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30336
         (519 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113638-1|AAM29643.1|  736|Drosophila melanogaster RH73613p pro...    29   5.0  
AE013599-3011|AAF57468.3|  774|Drosophila melanogaster CG33041-P...    29   5.0  
AY128415-1|AAM75008.1|  310|Drosophila melanogaster GH05248p pro...    28   8.7  
AE014297-2784|AAF55759.2|  272|Drosophila melanogaster CG4342-PA...    28   8.7  

>AY113638-1|AAM29643.1|  736|Drosophila melanogaster RH73613p
           protein.
          Length = 736

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -1

Query: 132 NNVLRCSPKLFIECRALINPWVRSVSDRSPG 40
           N+ LR    +F EC    NPW+  VS R  G
Sbjct: 389 NSTLREGIDVFFECNIKSNPWIYEVSWRHNG 419


>AE013599-3011|AAF57468.3|  774|Drosophila melanogaster CG33041-PA
           protein.
          Length = 774

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -1

Query: 132 NNVLRCSPKLFIECRALINPWVRSVSDRSPG 40
           N+ LR    +F EC    NPW+  VS R  G
Sbjct: 389 NSTLREGIDVFFECNIKSNPWIYEVSWRHNG 419


>AY128415-1|AAM75008.1|  310|Drosophila melanogaster GH05248p
           protein.
          Length = 310

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = -1

Query: 201 RSKLISRLLR--SPPQVLFTDDLHCNNVLRCSPKLFIECRALINPW 70
           R +   +L+R  S  ++   DD+ C+ +  C   L + C AL  P+
Sbjct: 55  RPRQSDQLIREGSSKRIYSLDDVECSELCSCGESLILTCHALCVPF 100


>AE014297-2784|AAF55759.2|  272|Drosophila melanogaster CG4342-PA
           protein.
          Length = 272

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = -1

Query: 201 RSKLISRLLR--SPPQVLFTDDLHCNNVLRCSPKLFIECRALINPW 70
           R +   +L+R  S  ++   DD+ C+ +  C   L + C AL  P+
Sbjct: 17  RPRQSDQLIREGSSKRIYSLDDVECSELCSCGESLILTCHALCVPF 62


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,587,057
Number of Sequences: 53049
Number of extensions: 533863
Number of successful extensions: 1075
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1048
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1075
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1908489216
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)