Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30335
         (714 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    46   7e-04
UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    34   4.0  
UniRef50_A5KQP0 Cluster: Putative uncharacterized protein; n=1; ...    33   9.2  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 46.4 bits (105), Expect = 7e-04
 Identities = 19/22 (86%), Positives = 21/22 (95%)
 Frame = -2

Query: 578 FLLLVWVDELTAHLVLSGHWNP 513
           FLLL WVDELTAHLVLSG+W+P
Sbjct: 154 FLLLRWVDELTAHLVLSGYWSP 175


>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 33.9 bits (74), Expect = 4.0
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = -2

Query: 383 WRYLPVRTHKRSYHQ 339
           W YLP RTHKRSYH+
Sbjct: 571 WWYLPARTHKRSYHR 585


>UniRef50_A5KQP0 Cluster: Putative uncharacterized protein; n=1;
            Ruminococcus torques ATCC 27756|Rep: Putative
            uncharacterized protein - Ruminococcus torques ATCC 27756
          Length = 1848

 Score = 32.7 bits (71), Expect = 9.2
 Identities = 19/55 (34%), Positives = 26/55 (47%)
 Frame = -1

Query: 498  VKASPTLRYKF*GLRYSYNGCPTLQTETHYCFTAEIDRVAVPTRADSQEVLPPVE 334
            VKA+P   Y F G  +S N    + T+  Y FT      A+  + +   V PPVE
Sbjct: 1366 VKATPDKDYHFVGWYHSSNAETPVSTDAEYEFTVS-GNYALTAKFEKDNVTPPVE 1419


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 653,277,724
Number of Sequences: 1657284
Number of extensions: 12511076
Number of successful extensions: 23811
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23249
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23811
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57438021881
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)