Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30334
         (773 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    25   0.89 
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    23   2.1  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    22   6.3  

>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 24.6 bits (51), Expect = 0.89
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 304 LSTIIGECW*VTRSKFCK 251
           LSTI+G CW +    +CK
Sbjct: 51  LSTILGTCWIIYVRIYCK 68


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 8/21 (38%), Positives = 16/21 (76%)
 Frame = +3

Query: 171 VVLSYSSVYNTRYINRLFYAR 233
           +++SYS+++   YI+ LF+ R
Sbjct: 206 LIISYSTLHFVNYIDDLFFFR 226


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = -3

Query: 636 FVGTSAQVSGYGRTGDGMFFKNFNVTFIN 550
           ++ + A ++GYG      +F + N+ F+N
Sbjct: 117 YIHSGAFMTGYGSFYQPDYFIDKNIVFVN 145


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,828
Number of Sequences: 336
Number of extensions: 3883
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20857569
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)