Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30334
(773 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_10327| Best HMM Match : Trypsin (HMM E-Value=0) 44 1e-04
SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_50961| Best HMM Match : Trypsin (HMM E-Value=0) 39 0.005
SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 38 0.012
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.036
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 35 0.064
SB_1192| Best HMM Match : Trypsin (HMM E-Value=3.9e-23) 34 0.11
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 34 0.15
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.19
SB_12588| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0) 32 0.45
SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30) 32 0.45
SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.59
SB_26911| Best HMM Match : Trypsin (HMM E-Value=0) 31 0.78
SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45) 31 0.78
SB_33589| Best HMM Match : Trypsin (HMM E-Value=0) 31 1.0
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 31 1.4
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 30 2.4
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_30267| Best HMM Match : Trypsin (HMM E-Value=0) 29 4.2
SB_59706| Best HMM Match : Trypsin (HMM E-Value=0.16) 29 4.2
SB_24109| Best HMM Match : Trypsin (HMM E-Value=4.6e-06) 29 4.2
SB_9601| Best HMM Match : Trypsin (HMM E-Value=0) 29 4.2
SB_35182| Best HMM Match : CUB (HMM E-Value=0) 29 5.5
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 29 5.5
SB_33085| Best HMM Match : Trypsin (HMM E-Value=0) 28 7.3
SB_58790| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 28 7.3
SB_47534| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_43527| Best HMM Match : Trypsin (HMM E-Value=0) 28 9.6
SB_28864| Best HMM Match : Trypsin (HMM E-Value=1.4e-40) 28 9.6
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.6
>SB_10327| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 865
Score = 44.0 bits (99), Expect = 1e-04
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Frame = -1
Query: 482 SGSQHNIRPDQAKRVATVRVITNNECRNVFGSMV-RDTIICTSGAEGRNICGSDSGGPLS 306
S QH + D+ ++ + V ++ CR+ G+ V +++IC GA G + C DSGGPL
Sbjct: 422 SSDQHTLA-DKLQQ-SKVPLVNYTTCRSTNGATVDENSMICAGGA-GSSACNGDSGGPLQ 478
Query: 305 IVNNNRRVLVG 273
+ N R VL G
Sbjct: 479 CLENERWVLRG 489
>SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 246
Score = 39.1 bits (87), Expect = 0.004
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Frame = -1
Query: 431 VRVITNNECR---NVFGSMVRDTIICTSGAEGRNICGSDSGGPLSIVNNNRRVLVG 273
V +I NN+C+ + ++ +++C GA G +IC DSGGPL N VL G
Sbjct: 110 VSIIENNKCKVKNDCHYKVLDKSMVCAGGA-GSSICHGDSGGPLQCEENGHWVLRG 164
>SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 1007
Score = 38.7 bits (86), Expect = 0.005
Identities = 22/47 (46%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Frame = -1
Query: 443 RVATVRVITNNECR-NVFGSMVRDTIICTSGAEGRNI--CGSDSGGP 312
R AT+ V++ +ECR N G + D +IC +G EG I C DSGGP
Sbjct: 587 RHATIPVLSVSECRANYSGHTINDKVIC-AGYEGGKIDSCKGDSGGP 632
>SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 38.3 bits (85), Expect = 0.007
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -1
Query: 488 WFSGSQHNIRPDQAKRVATVRVITNNECRNVFGSMVRDTIICTS-GAEGRNICGSDSGGP 312
W S H PD ++ ATV V+ C + + ++++C A G + C DSGGP
Sbjct: 455 WGKLSSHGSAPDILQQ-ATVPVVGRARCMKAYRGQIHESMLCAGLDAGGVDACQGDSGGP 513
Query: 311 L 309
+
Sbjct: 514 M 514
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 38.3 bits (85), Expect = 0.007
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = -1
Query: 488 WFSGSQHNIRPDQAKRVATVRVITNNECRNVFGSMVRDTIICTSGAEGR-NICGSDSGGP 312
W + S +P+ A A V + T +EC + + +IC EG + C DSGGP
Sbjct: 761 WGTLSSGGSQPE-ALNQAVVPLRTRSECERSYPGKISADMICAGNPEGGVDTCQGDSGGP 819
Query: 311 LSIVNNNRRVLVG 273
L + N+ L G
Sbjct: 820 LVCQHGNQWFLTG 832
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 37.5 bits (83), Expect = 0.012
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = -1
Query: 437 ATVRVITNNECRNVFGSMVRDTIICTS-GAEGRNICGSDSGGPLSIVNNNR 288
A+V +++ ++C + + + D+++C A G + C DSGGPL N R
Sbjct: 97 ASVPLVSQSKCNTAYPNKIHDSMLCAGLDAGGIDACQGDSGGPLVCEYNGR 147
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 35.9 bits (79), Expect = 0.036
Identities = 14/44 (31%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = -1
Query: 437 ATVRVITNNECRNVFGSMVRDTIICTS-GAEGRNICGSDSGGPL 309
A+V +++ ++C + + + D+++C A G + C DSGGPL
Sbjct: 441 ASVPLVSQSKCNTAYPNKIHDSMLCAGLDAGGIDACQGDSGGPL 484
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 35.1 bits (77), Expect = 0.064
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = -1
Query: 383 VRDTIICTSGAEGRNICGSDSGGPLSIVNNNRRVLVG 273
V T++C G + C DSGGPL NNN+ LVG
Sbjct: 384 VSSTMLCAQ-VPGIDTCQGDSGGPLVCENNNKWTLVG 419
>SB_1192| Best HMM Match : Trypsin (HMM E-Value=3.9e-23)
Length = 136
Score = 34.3 bits (75), Expect = 0.11
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Frame = -1
Query: 494 H*WFSG----SQHNIRPDQAKRVATVRVITNNECRNVFGSMVRDTIICTSGAEGR-NICG 330
H W +G S PD ++V+ V + + C + + + + D++IC +G + C
Sbjct: 25 HCWVTGWGRLSSGGSTPDYLQQVS-VPIRSRARCDSSYPNKIHDSMICAGIDKGGIDACQ 83
Query: 329 SDSGGPLSIVNNNRRVLVG 273
DSGGP+ N R + G
Sbjct: 84 GDSGGPMVCENGGRFYIHG 102
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 33.9 bits (74), Expect = 0.15
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = -1
Query: 437 ATVRVITNNECRNVFGSMVRDTIICT----SGAEGRNICGSDSGGPLSIVNNNRRVLVG 273
A + + ++N+C+N + + +C SGA G C DSGGPL +N R L G
Sbjct: 226 AMLPIASHNDCKNKYYGVSSTAHLCAGEARSGASGG--CNGDSGGPLVCEDNGRWYLHG 282
Score = 33.9 bits (74), Expect = 0.15
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = -1
Query: 437 ATVRVITNNECRNVFGSMVRD-TIICT--SGAEGRNICGSDSGGPLSIVNNNRRVLVG 273
A V +++ +C+ +G+++R + IC + + C DSGGPL R VL G
Sbjct: 467 AKVPIVSKEDCKRAYGAIIRPYSHICVGFNTENAASSCQGDSGGPLVCEEEGRWVLHG 524
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 33.5 bits (73), Expect = 0.19
Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -1
Query: 437 ATVRVITNNECRNVFGSMVRDTIICTSGAEGR-NICGSDSGGPLSIVNNNRRVLVG 273
A+V V++ C + + D+++C +G + C DSGGP+ + R + G
Sbjct: 846 ASVPVVSRARCEKAYPGKIHDSMLCAGLDQGGIDTCQGDSGGPMVCESRGRFYIHG 901
>SB_12588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 33.5 bits (73), Expect = 0.19
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = -1
Query: 458 PDQAKRVATVRVITNNECRNVFGSMVRD--TIICTSGAEGRNICGSDSGGPLSIVNNNRR 285
P ++ R + V ++ + C+ D T++C GA G + C DSGGPL +
Sbjct: 78 PAKSLRQSLVPLVDHVTCKRGLKEFYLDEETMMCVGGA-GSSACNGDSGGPLVCEEGGKW 136
Query: 284 VLVG 273
VL G
Sbjct: 137 VLRG 140
>SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)
Length = 687
Score = 32.3 bits (70), Expect = 0.45
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = -1
Query: 437 ATVRVITNNECRNVFGSM--VRDTIICTSGAEGRNICGSDSGGPLSIVNNNRRVLVG 273
A + V +N +C G + V D + +G GR C DSGGPL R VL G
Sbjct: 550 AELVVASNAKCDKKNGELLPVDDASMVCAGGPGRGGCQGDSGGPLVCNEAGRWVLRG 606
>SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30)
Length = 249
Score = 32.3 bits (70), Expect = 0.45
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = -1
Query: 437 ATVRVITNNECRNVFGSM--VRDTIICTSGAEGRNICGSDSGGPLSIVNNNRRVLVG 273
A + V +N +C G + V D + +G GR C DSGGPL R VL G
Sbjct: 90 AELVVASNAKCDKKNGELLPVDDASMVCAGGPGRGGCQGDSGGPLVCNEAGRWVLRG 146
>SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 31.9 bits (69), Expect = 0.59
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = -1
Query: 488 WFSGSQHNIRPDQAKRVATVRVITNNEC-RNVFGSMVRDTIICTSGAEGR-NICGSDSGG 315
W S S PD+ + A+V +++ + C + + ++++C +G + C DSGG
Sbjct: 161 WGSLSSGGAAPDRLMQ-ASVPLVSKSRCDTGNYTGKIHESMLCAGLEQGGVDSCQGDSGG 219
Query: 314 PLSIVNNNRR 285
PL + N R
Sbjct: 220 PLVCEDTNGR 229
>SB_26911| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 349
Score = 31.5 bits (68), Expect = 0.78
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Frame = -1
Query: 494 H*WFSGSQH----NIRPDQAKRVATVRVITNNECRNVFGSMVRDTIICTSGAEGR-NICG 330
H W +G H PD ++ A+V +++ + C + + +++C +G + C
Sbjct: 238 HCWITGWGHLASGGDTPDLLQQ-ASVPIVSRSRCDKAYPGKIDSSMLCAGLDKGGIDACQ 296
Query: 329 SDSGGPL 309
DSGGPL
Sbjct: 297 RDSGGPL 303
>SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45)
Length = 234
Score = 31.5 bits (68), Expect = 0.78
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Frame = -1
Query: 437 ATVRVITNNECRNVFGSMVRD-TIICTSGAE--GRNICGSDSGGPLSIVNNNRRVLVG 273
A + + ++ +C+ +GS + T +C A+ C DSGGPL N + L G
Sbjct: 90 ARIPIASHEDCKRKYGSGIYSYTHLCAGEAKPNAAGACQGDSGGPLVCERNGQWTLYG 147
>SB_33589| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 289
Score = 31.1 bits (67), Expect = 1.0
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Frame = -1
Query: 452 QAKRVATVRVITNNECRNV--FGSMVRDTIICTSGAEGR-NICGSDSGGPLSIVNNNRRV 282
Q R ATV+++ C V + + +C +G + C DSGGPLS +R
Sbjct: 190 QVIREATVKLVPPEICNQVESYNGSIHVRALCAGFDQGGVDACQFDSGGPLSCSIGSRFY 249
Query: 281 LVG 273
L G
Sbjct: 250 LTG 252
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 31.1 bits (67), Expect = 1.0
Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Frame = -1
Query: 479 GSQHNIRPDQAKRVATVRVITNNECRNVFGS---MVRDTIICTS-GAEGRNICGSDSGGP 312
G N RP + + A V V+ +N C+ + + V ++C + R+ C DSGG
Sbjct: 1303 GVTENKRPSKTLKEAIVPVVNHNACKKAYENETWPVTSNMLCAGYKNKSRDSCNRDSGGG 1362
Query: 311 LSIVNNNRR 285
++ R
Sbjct: 1363 FVFYDSRAR 1371
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = -1
Query: 431 VRVITNNECR--NVFGSMVRDTIICTSGAEG-RNICGSDSGGPLSIVN 297
V +++ C + + + D C +G R+ CG DSGGPL N
Sbjct: 141 VDIVSKEVCNANDSYNGTINDRYFCAGFPQGGRDSCGGDSGGPLVCSN 188
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = -1
Query: 437 ATVRVITNNECRNVFGSMV---RDTIICTSGAEGRNICGSDSGGPLSIVNNNRRVLVG 273
A + V +++C+ G +V ++IC +G +G+ C DSGGP + VL G
Sbjct: 176 AMLPVAGDSDCQRTNGRLVPVDSRSMIC-AGGQGKGGCQGDSGGPFVCEEGGKWVLRG 232
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -1
Query: 380 RDTIICTSGAEGRNICGSDSGGPLSIVNNNRRVLVG 273
+ T+IC G+ G + C DSGGPL VL G
Sbjct: 480 KTTMICAGGS-GSSACSGDSGGPLVCHEGGTWVLRG 514
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Frame = -1
Query: 437 ATVRVITNNECRNVFGSMVRDTIICTSGA--EGRNICGSDSGGPLSIVNNNRRVLVG 273
A + + ++ CR +G + +C A + C DSGGPL +N L G
Sbjct: 581 AMLPIASHENCRRKYGDVSSTAHLCAGEARSDAAGGCNGDSGGPLVCEDNGSWFLHG 637
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Frame = -1
Query: 437 ATVRVITNNECRNVFGSMVRDTIICTSGA--EGRNICGSDSGGPLSIVNNNRRVLVG 273
A + + ++ CR +G + +C A + C DSGGPL +N L G
Sbjct: 911 AMLPIASHENCRRKYGDVSSTAHLCAGEARSDAAGGCNGDSGGPLVCEDNGSWFLHG 967
>SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 282
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Frame = -1
Query: 383 VRDTIICT--SGAEGRNICGSDSGGP 312
V +T++C +G G+N C DSGGP
Sbjct: 206 VTETMLCAGDAGKTGKNGCNGDSGGP 231
>SB_59706| Best HMM Match : Trypsin (HMM E-Value=0.16)
Length = 91
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = -1
Query: 431 VRVITNNECRNVFGSMVRDTIICTSGAEGR-NICGSDSGGPLSIVNNNRRVLVG 273
V +++ + C + S + ++++C A G + C DSGGP+ N + L G
Sbjct: 20 VPIVSASTCSRAY-SRLHESMVCAGRASGGIDSCQGDSGGPMVCEYNGKFNLEG 72
>SB_24109| Best HMM Match : Trypsin (HMM E-Value=4.6e-06)
Length = 151
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Frame = -1
Query: 452 QAKRVATVRVITNNECR--NVFGSMVRDTIICTSGAEGR-NICGSDSGGPL 309
+A R A VR++ C N + + +C EG + C DSGGPL
Sbjct: 99 EALREAKVRLVPTWVCNLVNSYNGTIHSRALCAGFKEGGVDACQYDSGGPL 149
>SB_9601| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 285
Score = 29.1 bits (62), Expect = 4.2
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Frame = -1
Query: 494 H*WFSGSQHNIRPDQAKRVATVRVITNNECRNV--FGSMVRDTIICTSGAEG-RNICGSD 324
H ++GSQ N+ V ++++ C + + +T +C G ++ C D
Sbjct: 169 HTRWNGSQPNVL-----NFVMVPLVSHATCNKPLSYNGTIHETALCAGYERGLKDSCEFD 223
Query: 323 SGGPLSIVNNNRRVLVG 273
SGGPL+ R VG
Sbjct: 224 SGGPLACQKGGRYYAVG 240
>SB_35182| Best HMM Match : CUB (HMM E-Value=0)
Length = 963
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = -1
Query: 437 ATVRVITNNEC--RNVFGSMVRDTIICTSGAEGR-NICGSDSGGPLSIVN 297
A V +++ ++C + +G + + ++C +G + C DSGGP N
Sbjct: 369 AKVPLVSRDQCSHQQSYGDRITENMLCAGMRQGGVDSCQGDSGGPFVCTN 418
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 28.7 bits (61), Expect = 5.5
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = -1
Query: 461 RPDQAKRVATVRVITNNEC--RNVFGSMVRDTIICTSGAEGRNICGSDSGGPLSIVNNNR 288
+P + + A + V +++ C +N + V + + +G G C DSGGP R
Sbjct: 210 QPSEILQQAMLPVASHSACDRKNSYLVPVEEKSMICAGGMGMGGCQGDSGGPFVCNEGGR 269
Query: 287 RVLVG 273
VL G
Sbjct: 270 WVLRG 274
>SB_33085| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 537
Score = 28.3 bits (60), Expect = 7.3
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = -1
Query: 359 SGAEG--RNICGSDSGGPLSIVNNNRRVLVGYS 267
+G EG + +C DSGGPL R L+G S
Sbjct: 470 AGTEGVAKAVCSGDSGGPLVCERGGRWFLMGLS 502
>SB_58790| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1005
Score = 28.3 bits (60), Expect = 7.3
Identities = 10/36 (27%), Positives = 24/36 (66%)
Frame = +1
Query: 181 AIVRSTIQDTSIVYFMLAMFLFLICKIYCE*PTNTL 288
A+V+++ ++ S + ++ +F+FL+ +Y PT T+
Sbjct: 736 AVVKASAREFSFMMLLMIVFMFLLTILYIGRPTQTM 771
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 28.3 bits (60), Expect = 7.3
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = -1
Query: 359 SGAEG--RNICGSDSGGPLSIVNNNRRVLVGYS 267
+G EG + +C DSGGPL R L+G S
Sbjct: 719 AGTEGVAKAVCSGDSGGPLVCERGGRWFLMGLS 751
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 28.3 bits (60), Expect = 7.3
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = -1
Query: 437 ATVRVITNNECRNVFGSM---VRDTIICTS-GAEGRNICGSDSGGPL 309
A V +++ + C+ + + V + C GA G + C DSGGPL
Sbjct: 255 AAVPLVSRDTCQKAYNDLHYKVSSRMRCAGYGAGGIDACQGDSGGPL 301
>SB_47534| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 28.3 bits (60), Expect = 7.3
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +3
Query: 318 ARVAAADITTFSSACTDNSVPDHRSKNISTFIVGNNSDGCHS 443
+R A+ +T +SS+ S+ +H NISTF+ +S CH+
Sbjct: 346 SRRASLSVTFWSSSSQIWSLEEH-GVNISTFVDDTHSRACHA 386
>SB_43527| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 366
Score = 27.9 bits (59), Expect = 9.6
Identities = 19/75 (25%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
Frame = -1
Query: 512 NIQFTLH*WFSGSQHNIRPDQAKRVATVRVITNNECRNVFGSMVRDTIICTSGAEGRN-- 339
N+ T+ W R ATV ++ CR + + +G E +
Sbjct: 244 NVSGTISGWGKRKLWRDRVANRLHEATVPIVDIQTCRKAHPDYIVTANMFCAGFENSSRG 303
Query: 338 -ICGSDSGGPLSIVN 297
C DSGGP S+ N
Sbjct: 304 DACQGDSGGPFSVDN 318
>SB_28864| Best HMM Match : Trypsin (HMM E-Value=1.4e-40)
Length = 230
Score = 27.9 bits (59), Expect = 9.6
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = -1
Query: 443 RVATVRVITNNECRNV--FGSMVRDTIICTSGAEGR-NICGSDSGGPLSIVNNNRRVLVG 273
R A V+++ ++C + + V +C G + C DSGGPL+ R L G
Sbjct: 132 REAQVQLVPQDKCNSPQSYNGEVSGRALCAGFERGGVDACQYDSGGPLACEERGRWYLTG 191
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 27.9 bits (59), Expect = 9.6
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +2
Query: 617 CAEVPTKLL-LRRDPDGKVIA*IASERTFEIFNEKSNLIEYILKIITK 757
C E+ LL RR+ + +A+E+ ++F EK NL+E L ++ K
Sbjct: 2848 CKELSRNLLERRRETEAVKKEMVATEKKVKLFLEKQNLLEEKLLLLQK 2895
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,280,706
Number of Sequences: 59808
Number of extensions: 451894
Number of successful extensions: 1229
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1227
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2107953584
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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