Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30334
         (773 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like...    34   0.13 
U80445-6|AAB37797.2|  575|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z81484-8|CAE11295.1|  325|Caenorhabditis elegans Hypothetical pr...    29   2.8  
U40959-3|AAA81767.2|  445|Caenorhabditis elegans Hypothetical pr...    29   4.9  
U40954-8|AAM69083.2|  471|Caenorhabditis elegans Hypothetical pr...    29   4.9  
U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical pr...    28   8.5  

>AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like
           protease protein 5 protein.
          Length = 331

 Score = 33.9 bits (74), Expect = 0.13
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = -1

Query: 443 RVATVRVITNNECRNVFGSMVRDTIICTSGAEGRNICGSDSGGPLS 306
           +V T+   T   C   +G+ +     CT+  E +N+C  DSGG L+
Sbjct: 234 QVLTLATETLATCEENWGTSIPFDSFCTAEEEDKNVCSGDSGGGLT 279


>U80445-6|AAB37797.2|  575|Caenorhabditis elegans Hypothetical
           protein C50F2.1 protein.
          Length = 575

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 16/55 (29%), Positives = 25/55 (45%)
 Frame = -2

Query: 478 VLNTTSDQIKRREWQPSELLPTMNVEMFLDLWSGTLLSVQAELKVVISAAATLAD 314
           +++  +D      WQ  E L     E+FL+ W   + S    LK ++ A  TL D
Sbjct: 54  LISLMNDTFNEATWQNLESLDITGSELFLNGWIRQIGSTLPSLKRLVIAGRTLTD 108


>Z81484-8|CAE11295.1|  325|Caenorhabditis elegans Hypothetical
           protein C47A10.9 protein.
          Length = 325

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
 Frame = +3

Query: 129 TLFRCFACDLLII*VVLSYSSVYNTRY-INRLFYARDVFVSDLQNLLRVTYQHSPIIV 299
           T++R F     ++  +LS SS   T + I    YAR V      +LL+  +  SPI+V
Sbjct: 122 TVWRYFRYPFFVLNYILSISSGLTTYFMIPEQSYARSVIFERNPDLLQFDFPESPILV 179


>U40959-3|AAA81767.2|  445|Caenorhabditis elegans Hypothetical
           protein B0310.3 protein.
          Length = 445

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
 Frame = +2

Query: 26  ETAPKNVNNTRSRAK-PPPAVKYCPREENSLIMKRYF--ISLFCLRFINHLSSIEL*FGL 196
           ++A KN    R   K  PP  ++ P EE+    KRYF  I ++ L FI   +++ L  G+
Sbjct: 362 QSARKNQKKGRKNRKVEPPKEEFEPYEEDHYNFKRYFLIIGVYVLVFIYVCTNV-LTVGV 420

Query: 197 QYK 205
            Y+
Sbjct: 421 SYE 423


>U40954-8|AAM69083.2|  471|Caenorhabditis elegans Hypothetical
           protein ZK813.5 protein.
          Length = 471

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = -1

Query: 395 FGSMVRDTIICTSGAEGRNICGSDSGGPLSIV 300
           F S V   +I T     R +CG D GGP+  V
Sbjct: 163 FASAVFMNVIPTKPFRNRYVCGIDGGGPIGYV 194


>U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical protein
            F45E4.4 protein.
          Length = 2361

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +2

Query: 5    RRPADANETAPKNVNNTRSRAKPPPAVKYCPREE 106
            R+P D+ ET+ K+    R   KPPP +K    EE
Sbjct: 1880 RQPVDS-ETSVKSRTIQRGPTKPPPMIKITVEEE 1912


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,958,279
Number of Sequences: 27780
Number of extensions: 356377
Number of successful extensions: 1173
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1173
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)