Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30333
(740 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL133561-1|CAB63715.1| 580|Homo sapiens hypothetical protein pr... 35 0.35
AK223042-1|BAD96762.1| 433|Homo sapiens eukaryotic translation ... 34 0.62
Z34278-1|CAA84032.1| 279|Homo sapiens mucin protein. 33 0.81
X74874-1|CAA52862.1| 1970|Homo sapiens RNA polymerase II largest... 33 1.1
X63564-1|CAA45125.1| 1970|Homo sapiens RNA polymerase II largest... 33 1.1
BC034980-1|AAH34980.1| 603|Homo sapiens Unknown (protein for IM... 33 1.1
AF144094-1|AAF05903.1| 3530|Homo sapiens unconventional myosin-1... 32 1.9
Z34282-1|CAA84036.1| 98|Homo sapiens mucin protein. 31 3.3
Z34276-1|CAA84030.1| 94|Homo sapiens mucin protein. 31 3.3
BC018708-1|AAH18708.1| 434|Homo sapiens zinc finger CCCH-type c... 31 4.3
AK027357-1|BAB55059.1| 434|Homo sapiens protein ( Homo sapiens ... 31 4.3
U31659-1|AAA84390.1| 677|Homo sapiens TAFII80 protein. 31 5.7
L25444-1|AAA63643.1| 677|Homo sapiens TAFII70 protein. 31 5.7
BC018115-1|AAH18115.1| 677|Homo sapiens TAF6 RNA polymerase II,... 31 5.7
AY149894-1|AAN10295.1| 677|Homo sapiens TAF6 RNA polymerase II,... 31 5.7
AL022152-2|CAD27434.1| 1142|Homo sapiens melanoma antigen family... 31 5.7
AF064589-1|AAC18837.1| 1142|Homo sapiens melanoma-associated ant... 31 5.7
AF056334-1|AAC24227.1| 1142|Homo sapiens cancer/testis antigen C... 31 5.7
L12141-1|AAA58477.1| 347|Homo sapiens fork head-related protein... 30 7.6
>AL133561-1|CAB63715.1| 580|Homo sapiens hypothetical protein
protein.
Length = 580
Score = 34.7 bits (76), Expect = 0.35
Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 3/97 (3%)
Frame = +1
Query: 151 SHVHGTTSMTPTKASPSSTFKRS*RT-WPARATMQVKHQRWPK--PPELSPIYLPVSPVM 321
SH + + TP +ASP+ R+ T P R +++ H+ P PP SP P
Sbjct: 206 SH-RASPTRTPPRASPTRRPPRASPTRTPPRESLRTSHRASPTRMPPRASPTRRPPRASP 264
Query: 322 PVQPLTSLTLTQTASGPETSPASDNLSVPSSDTWDKT 432
P + +T + P T P + + PS + +T
Sbjct: 265 TGSPPRASPMTPPRASPRTPPRASPTTTPSRASLTRT 301
>AK223042-1|BAD96762.1| 433|Homo sapiens eukaryotic translation
elongation factor 1 alpha 1 variant protein.
Length = 433
Score = 33.9 bits (74), Expect = 0.62
Identities = 24/69 (34%), Positives = 32/69 (46%)
Frame = +3
Query: 297 LSAGIPGDACAAANVINSYTDGVRSGNFAGFRQSLGPFFGHVGQNLNLINQLVTNPGQLR 476
LS +PGD NV N VR GN AG ++ P G +I ++ +PGQ+
Sbjct: 270 LSEALPGDN-VGFNVKNVSVKDVRRGNVAGDSKNDPPMEA-AGFTAQVI--ILNHPGQIS 325
Query: 477 YSVGPALGC 503
P LGC
Sbjct: 326 AGYAPVLGC 334
>Z34278-1|CAA84032.1| 279|Homo sapiens mucin protein.
Length = 279
Score = 33.5 bits (73), Expect = 0.81
Identities = 38/129 (29%), Positives = 53/129 (41%), Gaps = 4/129 (3%)
Frame = +1
Query: 163 GTTSMTPTKASPSSTFKRS*RTWPARATMQVKHQRWPKPPELSPIYLPVSPVMPVQPLTS 342
GTT S +S S + P +T PE +P SPV P TS
Sbjct: 157 GTTPSAVPTTSITSVPTTSTNSAPISSTTSATTTSRISGPETTP-----SPV-PTASTTS 210
Query: 343 LTLTQTASGPETSPA----SDNLSVPSSDTWDKT*ILSINSSLTLVNSDTLSDQPWVVPE 510
+ T T SGP T+P+ + +SVP++ T + + ++S T S P VP
Sbjct: 211 ASTTSTTSGPGTTPSPVPTTSTISVPTTSTTSASTTSTTSASTTSTTSGP-GTTPSPVPT 269
Query: 511 VEESMTSKP 537
S TS P
Sbjct: 270 T--STTSAP 276
>X74874-1|CAA52862.1| 1970|Homo sapiens RNA polymerase II largest
subunit protein.
Length = 1970
Score = 33.1 bits (72), Expect = 1.1
Identities = 37/130 (28%), Positives = 48/130 (36%), Gaps = 5/130 (3%)
Frame = +1
Query: 58 QAPTLHHR*PSINTVIMKFHATLMMEKLVP*SHVHGTTSMTPTKASPSSTFKRS*RTWPA 237
Q+PT PS + + T S+ + TPT S T + T P
Sbjct: 1814 QSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPK 1873
Query: 238 RA-TMQVKHQRWPKPPELSPIYLPVSPV-MPVQPLTSLTL-TQTASGPETSPASDNLS-- 402
+ T PK SP Y P SPV P P S T T + + P+ SP S S
Sbjct: 1874 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1933
Query: 403 VPSSDTWDKT 432
P T+ T
Sbjct: 1934 SPKGSTYSPT 1943
>X63564-1|CAA45125.1| 1970|Homo sapiens RNA polymerase II largest
subunit protein.
Length = 1970
Score = 33.1 bits (72), Expect = 1.1
Identities = 37/130 (28%), Positives = 48/130 (36%), Gaps = 5/130 (3%)
Frame = +1
Query: 58 QAPTLHHR*PSINTVIMKFHATLMMEKLVP*SHVHGTTSMTPTKASPSSTFKRS*RTWPA 237
Q+PT PS + + T S+ + TPT S T + T P
Sbjct: 1814 QSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPK 1873
Query: 238 RA-TMQVKHQRWPKPPELSPIYLPVSPV-MPVQPLTSLTL-TQTASGPETSPASDNLS-- 402
+ T PK SP Y P SPV P P S T T + + P+ SP S S
Sbjct: 1874 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1933
Query: 403 VPSSDTWDKT 432
P T+ T
Sbjct: 1934 SPKGSTYSPT 1943
>BC034980-1|AAH34980.1| 603|Homo sapiens Unknown (protein for
IMAGE:4824581) protein.
Length = 603
Score = 33.1 bits (72), Expect = 1.1
Identities = 22/105 (20%), Positives = 48/105 (45%)
Frame = +1
Query: 166 TTSMTPTKASPSSTFKRS*RTWPARATMQVKHQRWPKPPELSPIYLPVSPVMPVQPLTSL 345
T+ PT +SP + K S P+ ++M + P + + P ++P +P TS
Sbjct: 2 TSPFAPTMSSPKRSSKPSMSLAPSGSSMPTADPKPPASLKSTKSATPNRSLVPTKPATSR 61
Query: 346 TLTQTASGPETSPASDNLSVPSSDTWDKT*ILSINSSLTLVNSDT 480
+ S +++ ++ PS+ ++ + S + + V++DT
Sbjct: 62 NSVMSPSSSKSTKSTSTKRAPSNRPSSRSRVRSKARTPSRVSTDT 106
>AF144094-1|AAF05903.1| 3530|Homo sapiens unconventional myosin-15
protein.
Length = 3530
Score = 32.3 bits (70), Expect = 1.9
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +1
Query: 271 PKPPELSPIYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNL 399
PKP L+P L +P +P++P+ + L Q + PET+ S L
Sbjct: 2518 PKP--LAPAPLAKAPRLPIKPVAAPVLAQDQASPETTSPSPEL 2558
>Z34282-1|CAA84036.1| 98|Homo sapiens mucin protein.
Length = 98
Score = 31.5 bits (68), Expect = 3.3
Identities = 28/90 (31%), Positives = 39/90 (43%), Gaps = 4/90 (4%)
Frame = +1
Query: 163 GTTSMTPTKASPSSTFKRS*RTWPARATMQVKHQRWPKPPELSPIYLPVSPVMPVQPLTS 342
GTT S +S S + P +T PE +P SPV P TS
Sbjct: 3 GTTPSAVPTTSITSAPTTSTNSAPISSTTSATTTSRISGPETTP-----SPV-PTASTTS 56
Query: 343 LTLTQTASGPETSPA----SDNLSVPSSDT 420
+ T T SGP T+P+ + +SVP++ T
Sbjct: 57 ASTTSTTSGPGTTPSPVPTTSTISVPTTST 86
>Z34276-1|CAA84030.1| 94|Homo sapiens mucin protein.
Length = 94
Score = 31.5 bits (68), Expect = 3.3
Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Frame = +1
Query: 310 SPVMPVQPLTSLTLTQTASGPETSPA----SDNLSVPSSDTWDKT*ILSINSSLTLVNSD 477
SPV P TS + T T SGP T+P+ + +SVP++ T + + ++S T S
Sbjct: 5 SPV-PTASTTSASTTSTTSGPGTTPSPVPTTSTISVPTTSTTSASTTSTTSASTTSTTSG 63
Query: 478 TLSDQPWVVPEVEESMTSKP 537
P VP S TS P
Sbjct: 64 P-GTTPSPVPTT--STTSAP 80
>BC018708-1|AAH18708.1| 434|Homo sapiens zinc finger CCCH-type
containing 10 protein.
Length = 434
Score = 31.1 bits (67), Expect = 4.3
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Frame = +1
Query: 271 PKPPELSPIYLPVSPVMPV-----QPLTSLTLTQTASGPETSP-ASDNLSV 405
P P ++P+ + V+PV PV QPL +T++ T + T P AS ++ +
Sbjct: 379 PPPVSMAPVAVSVAPVAPVAVSMAQPLAGITMSHTTTPMVTYPIASQSMRI 429
>AK027357-1|BAB55059.1| 434|Homo sapiens protein ( Homo sapiens
cDNA FLJ14451 fis, clone HEMBB1001834. ).
Length = 434
Score = 31.1 bits (67), Expect = 4.3
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Frame = +1
Query: 271 PKPPELSPIYLPVSPVMPV-----QPLTSLTLTQTASGPETSP-ASDNLSV 405
P P ++P+ + V+PV PV QPL +T++ T + T P AS ++ +
Sbjct: 379 PPPVSMAPVAVSVAPVAPVAVSMAQPLAGITMSHTTTPMVTYPIASQSMRI 429
>U31659-1|AAA84390.1| 677|Homo sapiens TAFII80 protein.
Length = 677
Score = 30.7 bits (66), Expect = 5.7
Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = +1
Query: 157 VHGTTSMTPTKASPSSTFKRS*RTWPARATMQVKHQRWPKPPELSPIYLPVSPVMP-VQP 333
V + P + P + F + A +T QV P S PV+ +P VQP
Sbjct: 521 VSARAAAPPQPSPPPTKFIVMSSSSSAPSTQQVLSLSTSAPGSGSTTTSPVTTTVPSVQP 580
Query: 334 LTSLTLTQTASGPETSPA 387
+ L T T + P T+P+
Sbjct: 581 IVKLVSTATTAPPSTAPS 598
>L25444-1|AAA63643.1| 677|Homo sapiens TAFII70 protein.
Length = 677
Score = 30.7 bits (66), Expect = 5.7
Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = +1
Query: 157 VHGTTSMTPTKASPSSTFKRS*RTWPARATMQVKHQRWPKPPELSPIYLPVSPVMP-VQP 333
V + P + P + F + A +T QV P S PV+ +P VQP
Sbjct: 521 VSARAAAPPQPSPPPTKFIVMSSSSSAPSTQQVLSLSTSAPGSGSTTTSPVTTTVPSVQP 580
Query: 334 LTSLTLTQTASGPETSPA 387
+ L T T + P T+P+
Sbjct: 581 IVKLVSTATTAPPSTAPS 598
>BC018115-1|AAH18115.1| 677|Homo sapiens TAF6 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 80kDa
protein.
Length = 677
Score = 30.7 bits (66), Expect = 5.7
Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = +1
Query: 157 VHGTTSMTPTKASPSSTFKRS*RTWPARATMQVKHQRWPKPPELSPIYLPVSPVMP-VQP 333
V + P + P + F + A +T QV P S PV+ +P VQP
Sbjct: 521 VSARAAAPPQPSPPPTKFIVMSSSSSAPSTQQVLSLSTSAPGSGSTTTSPVTTTVPSVQP 580
Query: 334 LTSLTLTQTASGPETSPA 387
+ L T T + P T+P+
Sbjct: 581 IVKLVSTATTAPPSTAPS 598
>AY149894-1|AAN10295.1| 677|Homo sapiens TAF6 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 80kDa
protein.
Length = 677
Score = 30.7 bits (66), Expect = 5.7
Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = +1
Query: 157 VHGTTSMTPTKASPSSTFKRS*RTWPARATMQVKHQRWPKPPELSPIYLPVSPVMP-VQP 333
V + P + P + F + A +T QV P S PV+ +P VQP
Sbjct: 521 VSARAAAPPQPSPPPTKFIVMSSSSSAPSTQQVLSLSTSAPGSGSTTTSPVTTTVPSVQP 580
Query: 334 LTSLTLTQTASGPETSPA 387
+ L T T + P T+P+
Sbjct: 581 IVKLVSTATTAPPSTAPS 598
>AL022152-2|CAD27434.1| 1142|Homo sapiens melanoma antigen family C,
1 protein.
Length = 1142
Score = 30.7 bits (66), Expect = 5.7
Identities = 24/84 (28%), Positives = 36/84 (42%)
Frame = +1
Query: 286 LSPIYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNLSVPSSDTWDKT*ILSINSSLTL 465
LSP+ +P SP+ L+SL Q S PE + L P + S+ S +++
Sbjct: 689 LSPLQIPQSPLEGEDSLSSLHFPQ--SPPEWEDSLSPLHFPQFPPQGEDFQSSLQSPVSI 746
Query: 466 VNSDTLSDQPWVVPEVEESMTSKP 537
+S T P PE +S P
Sbjct: 747 CSSSTSLSLPQSFPESPQSPPEGP 770
>AF064589-1|AAC18837.1| 1142|Homo sapiens melanoma-associated
antigen protein.
Length = 1142
Score = 30.7 bits (66), Expect = 5.7
Identities = 24/84 (28%), Positives = 36/84 (42%)
Frame = +1
Query: 286 LSPIYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNLSVPSSDTWDKT*ILSINSSLTL 465
LSP+ +P SP+ L+SL Q S PE + L P + S+ S +++
Sbjct: 689 LSPLQIPQSPLEGEDSLSSLHFPQ--SPPEWEDSLSPLHFPQFPPQGEDFQSSLQSPVSI 746
Query: 466 VNSDTLSDQPWVVPEVEESMTSKP 537
+S T P PE +S P
Sbjct: 747 CSSSTSLSLPQSFPESPQSPPEGP 770
>AF056334-1|AAC24227.1| 1142|Homo sapiens cancer/testis antigen CT7
protein.
Length = 1142
Score = 30.7 bits (66), Expect = 5.7
Identities = 24/84 (28%), Positives = 36/84 (42%)
Frame = +1
Query: 286 LSPIYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNLSVPSSDTWDKT*ILSINSSLTL 465
LSP+ +P SP+ L+SL Q S PE + L P + S+ S +++
Sbjct: 689 LSPLQIPQSPLEGEDSLSSLHFPQ--SPPEWEDSLSPLHFPQFPPQGEDFQSSLQSPVSI 746
Query: 466 VNSDTLSDQPWVVPEVEESMTSKP 537
+S T P PE +S P
Sbjct: 747 CSSSTSLSLPQSFPESPQSPPEGP 770
>L12141-1|AAA58477.1| 347|Homo sapiens fork head-related protein
protein.
Length = 347
Score = 30.3 bits (65), Expect = 7.6
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +1
Query: 268 WPKPPELSPIYLPVSPVMPVQPLTS-LTLTQTASG-PETSPASDNLSVP 408
W PE +Y PV+PV + PL S +TL +S P PAS S P
Sbjct: 15 WSYYPEAGEVYSPVTPVPTMAPLNSYMTLNPLSSPYPGGLPASPLPSGP 63
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,042,466
Number of Sequences: 237096
Number of extensions: 2286435
Number of successful extensions: 7089
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 6485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7076
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8847149012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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