Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30333
         (740 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    25   0.99 
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    25   0.99 
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          24   1.7  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     23   4.0  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   7.0  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 24.6 bits (51), Expect = 0.99
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +2

Query: 638  HRCLHHRSLTSFGCSSVPPISWINHRPSERRWQR 739
            H  ++H    + GC+S PP +      S RR Q+
Sbjct: 1738 HSFMYHEHAMTEGCASPPPAATSMKSVSSRRRQQ 1771


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 24.6 bits (51), Expect = 0.99
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +2

Query: 638  HRCLHHRSLTSFGCSSVPPISWINHRPSERRWQR 739
            H  ++H    + GC+S PP +      S RR Q+
Sbjct: 1734 HSFMYHEHAMTEGCASPPPAATSMKSVSSRRRQQ 1767


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 7/21 (33%), Positives = 18/21 (85%)
 Frame = -1

Query: 437 IQVLSHVSEEGTERLSEAGEV 375
           ++ +S+V ++GTE ++++G+V
Sbjct: 184 LESISYVKDDGTEGIAKSGDV 204


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 14/50 (28%), Positives = 25/50 (50%)
 Frame = +1

Query: 307 VSPVMPVQPLTSLTLTQTASGPETSPASDNLSVPSSDTWDKT*ILSINSS 456
           V   + +QP   LTL++  S       S N +V   +  + T ILS++++
Sbjct: 466 VHDTLQIQPQEQLTLSKVTSNYHEEFQSLNNAVGEMEATNVTNILSMDNT 515


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +3

Query: 600 KRLYNSRNSQSNNIAAYITAHLLPS 674
           K L++S+    NN+    T  +LPS
Sbjct: 512 KELFSSQQKTKNNLMKLETTPVLPS 536


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,165
Number of Sequences: 438
Number of extensions: 4464
Number of successful extensions: 87
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 87
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 87
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23144850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)