Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30332
         (806 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    24   1.2  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    24   1.6  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    23   2.2  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   3.8  
AF265299-1|AAG17642.1|   63|Tribolium castaneum putative cytochr...    23   3.8  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   8.7  

>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 15/65 (23%), Positives = 31/65 (47%)
 Frame = +3

Query: 609 CCNNSFGTHRYLIINYFGSTCSR*RLDYIIYNNSRCCNNSFGTHRYLIINYFGSTCSR*R 788
           C +N+   H  +   Y GS+       Y++    R  + +F  H++L++N+  ST     
Sbjct: 261 CNSNNIWLH--VDAAYAGSSFICPEFRYLMKGIDRADSFNFNPHKWLLVNFDCSTMWLKD 318

Query: 789 LNWII 803
            +W++
Sbjct: 319 PSWLV 323



 Score = 23.0 bits (47), Expect = 2.9
 Identities = 13/55 (23%), Positives = 27/55 (49%)
 Frame = +3

Query: 504 CCNNSFGTHRYLIINYFGNTCSR*RLNYIIYNNSRCCNNSFGTHRYLIINYFGST 668
           C +N+   H  +   Y G++       Y++    R  + +F  H++L++N+  ST
Sbjct: 261 CNSNNIWLH--VDAAYAGSSFICPEFRYLMKGIDRADSFNFNPHKWLLVNFDCST 313


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +3

Query: 534 YLIINYFGNTCSR*RLNYIIYNNSRC 611
           YL+I    +  S  R NY++ NNS C
Sbjct: 377 YLVIFIQFDQSSNSRNNYVLTNNSTC 402



 Score = 21.4 bits (43), Expect = 8.7
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +3

Query: 639 YLIINYFGSTCSR*RLDYIIYNNSRC 716
           YL+I       S  R +Y++ NNS C
Sbjct: 377 YLVIFIQFDQSSNSRNNYVLTNNSTC 402


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 6/17 (35%), Positives = 14/17 (82%)
 Frame = +2

Query: 320 EFSYSNLVALRYLKLLV 370
           EF+Y N++ ++YL +++
Sbjct: 337 EFTYENILGMKYLDMVI 353


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -1

Query: 311 AVPEAVIVTAPEAETAITTGSPTVD 237
           +VPE  I T P  E A    +P+ D
Sbjct: 398 SVPEPTISTTPRPEWARPPSTPSAD 422


>AF265299-1|AAG17642.1|   63|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 63

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = +2

Query: 326 SYSNLVALRYLKLLVQPQPRL 388
           SYS+L  ++YL+L+++   RL
Sbjct: 39  SYSDLQEMKYLELVIKEALRL 59


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
 Frame = +1

Query: 520 LEPT-DTSSLITSVTLAPVEDSITSFTTTAGAATIVLEPTDTSSLITSVALAPVEDS 687
           L PT D ++   + TLA +   +     +   A  V  P DTS +   +   PV D+
Sbjct: 469 LTPTFDFTNGWANGTLAKLSPKVLEPLYSGNLAVSVATPNDTSLVRGRLVAKPVADA 525


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,891
Number of Sequences: 336
Number of extensions: 3227
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21999028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)