BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30331
(761 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EU068741-1|ABU40241.1| 993|Anopheles gambiae anion exchanger pr... 25 3.4
U51225-1|AAA96405.1| 692|Anopheles gambiae hexamerin protein. 24 4.5
AF020872-1|AAC31875.1| 692|Anopheles gambiae hexamerin A protein. 24 4.5
AF020871-1|AAC31874.1| 692|Anopheles gambiae hexamerin A protein. 24 4.5
AF020870-1|AAC31873.1| 692|Anopheles gambiae hexamerin A protein. 24 4.5
AJ439060-8|CAD27759.1| 808|Anopheles gambiae putative V-ATPase ... 23 7.8
>EU068741-1|ABU40241.1| 993|Anopheles gambiae anion exchanger
protein.
Length = 993
Score = 24.6 bits (51), Expect = 3.4
Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = +2
Query: 200 LYQNLTCFPYYMVTFQGLQNHPTNVPLLNNNYXXXXXXXXXXVPNAPR-IVPEAAQ 364
+Y+N+T P + N T++ LL NN V N ++PE A+
Sbjct: 596 VYKNITVAPLVPTPCLEVSNGTTSIGLLENNLTMVVNGTLGLVSNMDHLLIPEDAR 651
>U51225-1|AAA96405.1| 692|Anopheles gambiae hexamerin protein.
Length = 692
Score = 24.2 bits (50), Expect = 4.5
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 533 DTEKFDFQKFSEYYDDYKSAIEFTSGILF 619
+T+ DF + +E++D YK+ G LF
Sbjct: 69 ETKYNDFAQVAEFFDYYKTGAFLEKGELF 97
>AF020872-1|AAC31875.1| 692|Anopheles gambiae hexamerin A protein.
Length = 692
Score = 24.2 bits (50), Expect = 4.5
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 533 DTEKFDFQKFSEYYDDYKSAIEFTSGILF 619
+T+ DF + +E++D YK+ G LF
Sbjct: 69 ETKYNDFAQVAEFFDYYKTGAFLEKGELF 97
>AF020871-1|AAC31874.1| 692|Anopheles gambiae hexamerin A protein.
Length = 692
Score = 24.2 bits (50), Expect = 4.5
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 533 DTEKFDFQKFSEYYDDYKSAIEFTSGILF 619
+T+ DF + +E++D YK+ G LF
Sbjct: 69 ETKYNDFAQVAEFFDYYKTGAFLEKGELF 97
>AF020870-1|AAC31873.1| 692|Anopheles gambiae hexamerin A protein.
Length = 692
Score = 24.2 bits (50), Expect = 4.5
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 533 DTEKFDFQKFSEYYDDYKSAIEFTSGILF 619
+T+ DF + +E++D YK+ G LF
Sbjct: 69 ETKYNDFAQVAEFFDYYKTGAFLEKGELF 97
>AJ439060-8|CAD27759.1| 808|Anopheles gambiae putative V-ATPase
protein.
Length = 808
Score = 23.4 bits (48), Expect = 7.8
Identities = 7/33 (21%), Positives = 19/33 (57%)
Frame = -1
Query: 143 MLSQLNSVPHLSLVARNYQLVFPFLTLFNVQIN 45
+L+ VP+ ++ + + ++ L +FNV ++
Sbjct: 278 LLNVAKEVPNWEIIVKKVKAIYHTLNMFNVDVS 310
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 738,366
Number of Sequences: 2352
Number of extensions: 14500
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79002570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -