Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30331
         (761 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40955-5|AAA81753.1|  263|Caenorhabditis elegans Hypothetical pr...    37   0.018
Z74037-2|CAD36492.1|  441|Caenorhabditis elegans Hypothetical pr...    28   6.3  
Z74037-1|CAA98492.1|  510|Caenorhabditis elegans Hypothetical pr...    28   6.3  
U39652-5|AAV28338.1|  986|Caenorhabditis elegans Hypothetical pr...    28   8.3  
U39652-4|AAV28337.1| 1122|Caenorhabditis elegans Hypothetical pr...    28   8.3  

>U40955-5|AAA81753.1|  263|Caenorhabditis elegans Hypothetical
           protein F48B9.8 protein.
          Length = 263

 Score = 36.7 bits (81), Expect = 0.018
 Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 4/104 (3%)
 Frame = +2

Query: 440 KRLIAEFIDXXXXXXXXXXXXXXAVDTLEIIDTEKFDFQKFSEYYDDYKSAIEFTS---G 610
           +RL+AE ID               V TL   +    D ++     DD +  + F +    
Sbjct: 96  RRLLAELIDFVFILSFKLA----VVGTLS--ELGHIDLKQIGASLDDDQDVMNFINLAQD 149

Query: 611 ILFLEIVYRLLVCLFEAICLCGNVGQIG-GATPGKALLGLRVVT 739
           +L +E+V ++  C  EA+ +    G IG G T GK + G+RV++
Sbjct: 150 LLPVEVVCKVFCCFVEAVLMARGFGPIGVGQTLGKWMCGIRVIS 193


>Z74037-2|CAD36492.1|  441|Caenorhabditis elegans Hypothetical
           protein F57B7.1b protein.
          Length = 441

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = -1

Query: 638 TYIRFPETIFLK*ILLQIYN-HHNIH*ISGNQIFLCQLSPV 519
           T+I  P+  FL  + + +YN +H IH  +   IFLC L  +
Sbjct: 9   TFIHLPDKSFLYDVFVSVYNFYHPIH--AYLSIFLCVLGTI 47


>Z74037-1|CAA98492.1|  510|Caenorhabditis elegans Hypothetical
           protein F57B7.1a protein.
          Length = 510

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = -1

Query: 638 TYIRFPETIFLK*ILLQIYN-HHNIH*ISGNQIFLCQLSPV 519
           T+I  P+  FL  + + +YN +H IH  +   IFLC L  +
Sbjct: 9   TFIHLPDKSFLYDVFVSVYNFYHPIH--AYLSIFLCVLGTI 47


>U39652-5|AAV28338.1|  986|Caenorhabditis elegans Hypothetical
           protein R07E4.1b protein.
          Length = 986

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 15/58 (25%), Positives = 29/58 (50%)
 Frame = -1

Query: 215 LNSDIIVLVGSIFVVPENMLHVLRMLSQLNSVPHLSLVARNYQLVFPFLTLFNVQINI 42
           + +++I + G+I    +N    LR++   N     S V  NY+L     +L ++ IN+
Sbjct: 87  IKTNMISMFGAIIACEQNDAEALRVVIDKNQFDVTSAVNGNYELYPTKWSLLDIAINL 144


>U39652-4|AAV28337.1| 1122|Caenorhabditis elegans Hypothetical
           protein R07E4.1a protein.
          Length = 1122

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 15/58 (25%), Positives = 29/58 (50%)
 Frame = -1

Query: 215 LNSDIIVLVGSIFVVPENMLHVLRMLSQLNSVPHLSLVARNYQLVFPFLTLFNVQINI 42
           + +++I + G+I    +N    LR++   N     S V  NY+L     +L ++ IN+
Sbjct: 223 IKTNMISMFGAIIACEQNDAEALRVVIDKNQFDVTSAVNGNYELYPTKWSLLDIAINL 280


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,902,746
Number of Sequences: 27780
Number of extensions: 312769
Number of successful extensions: 746
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 744
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)