Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30329
         (417 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ302660-1|CAC35525.1|  195|Anopheles gambiae hypothetical prote...    24   2.5  
AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.    23   4.5  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    22   7.8  

>AJ302660-1|CAC35525.1|  195|Anopheles gambiae hypothetical protein
           protein.
          Length = 195

 Score = 23.8 bits (49), Expect = 2.5
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -2

Query: 287 LQRKCRQLPDTRPTDGVVIQKSTGQLTLR 201
           L+RK RQ  D   T+G VI  + G+ T+R
Sbjct: 105 LERKLRQAADEGSTNGTVI--TIGEHTIR 131


>AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.
          Length = 471

 Score = 23.0 bits (47), Expect = 4.5
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 38  HAPPSAKLCRSTRLAEFRRR 97
           H PPS  L + T LAE +++
Sbjct: 289 HLPPSTALVQQTNLAEQQQK 308


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 22.2 bits (45), Expect = 7.8
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = -3

Query: 271 ANYPTPDRQMALLYKNQLAS*LYVTLWHII 182
           ++ P P+RQ  L Y   L   + + +++II
Sbjct: 35  SDLPDPERQTILYYDLPLVYVIIIAIYYII 64


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 441,041
Number of Sequences: 2352
Number of extensions: 8495
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 34205040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)